RNA–Protein interactions for RNA: ENST00000511773.5

POLR2J3-216, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 5

Gene POLR2J3, Length 783 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-216ENST00000511773 ERCC3P19447 782 aa16.13■□□□□ 0.17
POLR2J3-216ENST00000511773 ITGB8P26012 769 aa16.13■□□□□ 0.17
POLR2J3-216ENST00000511773 SHMT1P34896 483 aa16.13■□□□□ 0.17
POLR2J3-216ENST00000511773 EPHB4P54760 987 aa16.13■□□□□ 0.17
POLR2J3-216ENST00000511773 SEPT2Q15019 361 aa16.13■□□□□ 0.17
POLR2J3-216ENST00000511773 TRMT2AQ8IZ69 625 aaKnown RBP16.13■□□□□ 0.17
POLR2J3-216ENST00000511773 MAGEB6Q8N7X4 407 aa16.13■□□□□ 0.17
POLR2J3-216ENST00000511773 USP38Q8NB14 1042 aa16.13■□□□□ 0.17
POLR2J3-216ENST00000511773 SPATC1LQ9H0A9 340 aa16.13■□□□□ 0.17
POLR2J3-216ENST00000511773 TNNQ9UQP3 1299 aa16.13■□□□□ 0.17
POLR2J3-216ENST00000511773 MUC3AQ02505 3323 aa16.13■□□□□ 0.17
POLR2J3-216ENST00000511773 A0A0G2JMZ2 1700 aa16.13■□□□□ 0.17
POLR2J3-216ENST00000511773 NAV1Q8NEY1 1877 aa16.12■□□□□ 0.17
POLR2J3-216ENST00000511773 MPHOSPH10O00566 681 aaKnown RBP16.12■□□□□ 0.17
POLR2J3-216ENST00000511773 STRNO43815 780 aa16.12■□□□□ 0.17
POLR2J3-216ENST00000511773 PQBP1O60828 265 aaKnown RBP16.12■□□□□ 0.17
POLR2J3-216ENST00000511773 CLTBP09497 229 aa16.12■□□□□ 0.17
POLR2J3-216ENST00000511773 GUCY1A2P33402 732 aa16.12■□□□□ 0.17
POLR2J3-216ENST00000511773 RARSP54136 660 aaKnown RBP16.12■□□□□ 0.17
POLR2J3-216ENST00000511773 COG2Q14746 738 aa16.12■□□□□ 0.17
POLR2J3-216ENST00000511773 SAMD1Q6SPF0 538 aaPredicted RBP16.12■□□□□ 0.17
POLR2J3-216ENST00000511773 TTC6Q86TZ1 520 aa16.12■□□□□ 0.17
POLR2J3-216ENST00000511773 TLR7Q9NYK1 1049 aaKnown RBP16.12■□□□□ 0.17
POLR2J3-216ENST00000511773 COL9A1P20849 921 aa16.11■□□□□ 0.17
POLR2J3-216ENST00000511773 PLCD1P51178 756 aa16.11■□□□□ 0.17
POLR2J3-216ENST00000511773 GRIN2CQ14957 1233 aa16.11■□□□□ 0.17
POLR2J3-216ENST00000511773 TJAP1Q5JTD0 557 aa16.11■□□□□ 0.17
POLR2J3-216ENST00000511773 NCAPG2Q86XI2 1143 aa16.11■□□□□ 0.17
POLR2J3-216ENST00000511773 ARHGAP45Q92619 1136 aa16.11■□□□□ 0.17
POLR2J3-216ENST00000511773 GPR108Q9NPR9 543 aa16.11■□□□□ 0.17
POLR2J3-216ENST00000511773 XPNPEP3Q9NQH7 507 aa16.11■□□□□ 0.17
POLR2J3-216ENST00000511773 SLC5A4Q9NY91 659 aa16.11■□□□□ 0.17
POLR2J3-216ENST00000511773 TMEM265A0A087WTH1 108 aa16.1■□□□□ 0.17
POLR2J3-216ENST00000511773 A0A1W2PRG0 241 aa16.1■□□□□ 0.17
POLR2J3-216ENST00000511773 RAG1P15918 1043 aa16.1■□□□□ 0.17
POLR2J3-216ENST00000511773 DNAJB2P25686 324 aa16.1■□□□□ 0.17
POLR2J3-216ENST00000511773 FPGSQ05932 587 aa16.1■□□□□ 0.17
POLR2J3-216ENST00000511773 C1orf53Q5VUE5 145 aa16.1■□□□□ 0.17
POLR2J3-216ENST00000511773 SHCBP1Q8NEM2 672 aa16.1■□□□□ 0.17
POLR2J3-216ENST00000511773 CLUAP1Q96AJ1 413 aa16.1■□□□□ 0.17
POLR2J3-216ENST00000511773 MAML3Q96JK9 1138 aa16.1■□□□□ 0.17
POLR2J3-216ENST00000511773 HOXC10Q9NYD6 342 aa16.1■□□□□ 0.17
POLR2J3-216ENST00000511773 DBNLQ9UJU6 430 aaKnown RBP16.1■□□□□ 0.17
POLR2J3-216ENST00000511773 PHF24Q9UPV7 400 aa16.1■□□□□ 0.17
POLR2J3-216ENST00000511773 TACC3Q9Y6A5 838 aa16.1■□□□□ 0.17
POLR2J3-216ENST00000511773 SMCHD1A6NHR9 2005 aa16.1■□□□□ 0.17
POLR2J3-216ENST00000511773 TNFRSF10AO00220 468 aa16.09■□□□□ 0.17
POLR2J3-216ENST00000511773 SURF6O75683 361 aaKnown RBP16.09■□□□□ 0.17
POLR2J3-216ENST00000511773 PGK1P00558 417 aa16.09■□□□□ 0.17
POLR2J3-216ENST00000511773 POLR3DP05423 398 aaPredicted RBP16.09■□□□□ 0.17
POLR2J3-216ENST00000511773 RARBP10826 455 aa16.09■□□□□ 0.17
POLR2J3-216ENST00000511773 TRIM27P14373 513 aa16.09■□□□□ 0.17
POLR2J3-216ENST00000511773 EVX2Q03828 476 aa16.09■□□□□ 0.17
POLR2J3-216ENST00000511773 CERS3Q8IU89 383 aa16.09■□□□□ 0.17
POLR2J3-216ENST00000511773 PPM1EQ8WY54 764 aa16.09■□□□□ 0.17
POLR2J3-216ENST00000511773 FRAT1Q92837 279 aaPredicted RBP16.09■□□□□ 0.17
POLR2J3-216ENST00000511773 ZNF512BQ96KM6 892 aaPredicted RBP16.09■□□□□ 0.17
POLR2J3-216ENST00000511773 CCDC8Q9H0W5 538 aaPredicted RBP16.09■□□□□ 0.17
POLR2J3-216ENST00000511773 MROH8Q9H579 483 aa16.09■□□□□ 0.17
POLR2J3-216ENST00000511773 RAPGEFL1Q9UHV5 662 aa16.09■□□□□ 0.17
POLR2J3-216ENST00000511773 BDP1A6H8Y1 2624 aa16.08■□□□□ 0.17
POLR2J3-216ENST00000511773 ZNFX1Q9P2E3 1918 aaKnown RBP16.08■□□□□ 0.16
POLR2J3-216ENST00000511773 A0A1W2PQ45 241 aaPredicted RBP16.08■□□□□ 0.16
POLR2J3-216ENST00000511773 A0A1W2PQY0 241 aa16.08■□□□□ 0.16
POLR2J3-216ENST00000511773 BCAR3O75815 825 aa16.08■□□□□ 0.16
POLR2J3-216ENST00000511773 FLOT1O75955 427 aa16.08■□□□□ 0.16
POLR2J3-216ENST00000511773 KIAA1755Q5JYT7 1200 aa16.08■□□□□ 0.16
POLR2J3-216ENST00000511773 SPICE1Q8N0Z3 855 aa16.08■□□□□ 0.16
POLR2J3-216ENST00000511773 LENG1Q96BZ8 264 aaPredicted RBP16.08■□□□□ 0.16
POLR2J3-216ENST00000511773 ATG4CQ96DT6 458 aa16.08■□□□□ 0.16
POLR2J3-216ENST00000511773 ANTXR1Q9H6X2 564 aa16.08■□□□□ 0.16
POLR2J3-216ENST00000511773 TMEM39AQ9NV64 488 aa16.08■□□□□ 0.16
POLR2J3-216ENST00000511773 ZNF316A6NFI3 1004 aaPredicted RBP16.07■□□□□ 0.16
POLR2J3-216ENST00000511773 KIAA0355O15063 1070 aa16.07■□□□□ 0.16
POLR2J3-216ENST00000511773 IGSF3O75054 1194 aa16.07■□□□□ 0.16
POLR2J3-216ENST00000511773 PGK2P07205 417 aa16.07■□□□□ 0.16
POLR2J3-216ENST00000511773 FCER1AP12319 257 aa16.07■□□□□ 0.16
POLR2J3-216ENST00000511773 MAP3K12Q12852 859 aa16.07■□□□□ 0.16
POLR2J3-216ENST00000511773 POLA2Q14181 598 aa16.07■□□□□ 0.16
POLR2J3-216ENST00000511773 RNF180Q86T96 592 aa16.07■□□□□ 0.16
POLR2J3-216ENST00000511773 CLEC10AQ8IUN9 316 aa16.07■□□□□ 0.16
POLR2J3-216ENST00000511773 ABRAQ8N0Z2 381 aa16.07■□□□□ 0.16
POLR2J3-216ENST00000511773 MB21D1Q8N884 522 aa16.07■□□□□ 0.16
POLR2J3-216ENST00000511773 TIFAQ96CG3 184 aa16.07■□□□□ 0.16
POLR2J3-216ENST00000511773 ZNF576Q9H609 170 aa16.07■□□□□ 0.16
POLR2J3-216ENST00000511773 C1orf115Q9H7X2 142 aa16.07■□□□□ 0.16
POLR2J3-216ENST00000511773 MYH8P13535 1937 aa16.06■□□□□ 0.16
POLR2J3-216ENST00000511773 PLXNA1Q9UIW2 1896 aa16.06■□□□□ 0.16
POLR2J3-216ENST00000511773 COL11A1P12107 1806 aaPredicted RBP16.06■□□□□ 0.16
POLR2J3-216ENST00000511773 IPO8O15397 1037 aaKnown RBP16.06■□□□□ 0.16
POLR2J3-216ENST00000511773 TAL1P17542 331 aaPredicted RBP16.06■□□□□ 0.16
POLR2J3-216ENST00000511773 DSG3P32926 999 aa16.06■□□□□ 0.16
POLR2J3-216ENST00000511773 SLC44A5Q8NCS7 719 aa16.06■□□□□ 0.16
POLR2J3-216ENST00000511773 MMP19Q99542 508 aa16.06■□□□□ 0.16
POLR2J3-216ENST00000511773 MCM9Q9NXL9 1143 aa16.06■□□□□ 0.16
POLR2J3-216ENST00000511773 PARP14Q460N5 1801 aa16.05■□□□□ 0.16
POLR2J3-216ENST00000511773 NCOR1O75376 2440 aa16.05■□□□□ 0.16
POLR2J3-216ENST00000511773 MYO9BQ13459 2157 aa16.05■□□□□ 0.16
POLR2J3-216ENST00000511773 MAGEB6P1A0A0J9YX57 407 aa16.05■□□□□ 0.16
POLR2J3-216ENST00000511773 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms