RNA–Protein interactions for RNA: ENST00000510638.1

NFKB1-209, Transcript of nuclear factor kappa B subunit 1, human

TSL 4

Gene NFKB1, Length 628 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NFKB1-209	ENST00000510638	CALM1	P0DP23	149 aa		10.13	□□□□□ -0.79
NFKB1-209	ENST00000510638	CALM2	P0DP24	149 aa		10.13	□□□□□ -0.79
NFKB1-209	ENST00000510638	CALM3	P0DP25	149 aa		10.13	□□□□□ -0.79
NFKB1-209	ENST00000510638	KCNA4	P22459	653 aa		10.13	□□□□□ -0.79
NFKB1-209	ENST00000510638	INPP5B	P32019	993 aa		10.13	□□□□□ -0.79
NFKB1-209	ENST00000510638	SEPT2	Q15019	361 aa		10.13	□□□□□ -0.79
NFKB1-209	ENST00000510638	MAP3K11	Q16584	847 aa		10.13	□□□□□ -0.79
NFKB1-209	ENST00000510638	NOL9	Q5SY16	702 aa	Known RBP	10.13	□□□□□ -0.79
NFKB1-209	ENST00000510638	NOL8	Q76FK4	1167 aa	Known RBP	10.13	□□□□□ -0.79
NFKB1-209	ENST00000510638	SGMS1	Q86VZ5	419 aa		10.13	□□□□□ -0.79
NFKB1-209	ENST00000510638	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	10.13	□□□□□ -0.79
NFKB1-209	ENST00000510638	ANKS1A	Q92625	1134 aa		10.13	□□□□□ -0.79
NFKB1-209	ENST00000510638	SNX21	Q969T3	373 aa		10.13	□□□□□ -0.79
NFKB1-209	ENST00000510638	ZSCAN31	Q96LW9	406 aa	Predicted RBP	10.13	□□□□□ -0.79
NFKB1-209	ENST00000510638	AGXT2	Q9BYV1	514 aa		10.13	□□□□□ -0.79
NFKB1-209	ENST00000510638	LY9	Q9HBG7	655 aa		10.13	□□□□□ -0.79
NFKB1-209	ENST00000510638	IL17RB	Q9NRM6	502 aa		10.13	□□□□□ -0.79
NFKB1-209	ENST00000510638	NYAP2	Q9P242	653 aa		10.13	□□□□□ -0.79
NFKB1-209	ENST00000510638	DAXX	Q9UER7	740 aa	Predicted RBP	10.13	□□□□□ -0.79
NFKB1-209	ENST00000510638	SYNPO2	Q9UMS6	1093 aa		10.13	□□□□□ -0.79
NFKB1-209	ENST00000510638	LIMCH1	Q9UPQ0	1083 aa		10.13	□□□□□ -0.79
NFKB1-209	ENST00000510638	RBM19	Q9Y4C8	960 aa	Known RBP	10.13	□□□□□ -0.79
NFKB1-209	ENST00000510638	SSC5D	A1L4H1	1573 aa		10.13	□□□□□ -0.79
NFKB1-209	ENST00000510638	COL6A3	P12111	3177 aa		10.12	□□□□□ -0.79
NFKB1-209	ENST00000510638	IGKV6D-41	A0A0C4DH26	115 aa		10.12	□□□□□ -0.79
NFKB1-209	ENST00000510638	KLF18	A0A0U1RQI7	1052 aa		10.12	□□□□□ -0.79
NFKB1-209	ENST00000510638	CCDC196	A0A1B0GTZ2	297 aa		10.12	□□□□□ -0.79
NFKB1-209	ENST00000510638	GOLGA8B	A8MQT2	603 aa		10.12	□□□□□ -0.79
NFKB1-209	ENST00000510638	DHX16	O60231	1041 aa	Known RBP	10.12	□□□□□ -0.79
NFKB1-209	ENST00000510638	DDAH1	O94760	285 aa		10.12	□□□□□ -0.79
NFKB1-209	ENST00000510638	EEF2	P13639	858 aa	Known RBP	10.12	□□□□□ -0.79
NFKB1-209	ENST00000510638	RCAN1	P53805	252 aa		10.12	□□□□□ -0.79
NFKB1-209	ENST00000510638	FMR1	Q06787	632 aa	Known RBP eCLIP	10.12	□□□□□ -0.79
NFKB1-209	ENST00000510638	TOB2	Q14106	344 aa	Predicted RBP	10.12	□□□□□ -0.79
NFKB1-209	ENST00000510638	VGLL4	Q14135	290 aa		10.12	□□□□□ -0.79
NFKB1-209	ENST00000510638	RRP1B	Q14684	758 aa	Known RBP	10.12	□□□□□ -0.79
NFKB1-209	ENST00000510638	SEC23A	Q15436	765 aa		10.12	□□□□□ -0.79
NFKB1-209	ENST00000510638	REM2	Q8IYK8	340 aa	Predicted RBP	10.12	□□□□□ -0.79
NFKB1-209	ENST00000510638	PNMA1	Q8ND90	353 aa		10.12	□□□□□ -0.79
NFKB1-209	ENST00000510638	ZKSCAN4	Q969J2	545 aa	Predicted RBP	10.12	□□□□□ -0.79
NFKB1-209	ENST00000510638	FEZ1	Q99689	392 aa		10.12	□□□□□ -0.79
NFKB1-209	ENST00000510638	GNL3	Q9BVP2	549 aa	Known RBP eCLIP	10.12	□□□□□ -0.79
NFKB1-209	ENST00000510638	GOPC	Q9HD26	462 aa		10.12	□□□□□ -0.79
NFKB1-209	ENST00000510638	SH2B1	Q9NRF2	756 aa	Predicted RBP	10.12	□□□□□ -0.79
NFKB1-209	ENST00000510638	CLIP2	Q9UDT6	1046 aa		10.12	□□□□□ -0.79
NFKB1-209	ENST00000510638	ZBTB43	O43298	467 aa		10.11	□□□□□ -0.79
NFKB1-209	ENST00000510638	RAD21	O60216	631 aa		10.11	□□□□□ -0.79
NFKB1-209	ENST00000510638	HSP90AA1	P07900	732 aa	Known RBP	10.11	□□□□□ -0.79
NFKB1-209	ENST00000510638	PTPRA	P18433	802 aa		10.11	□□□□□ -0.79
NFKB1-209	ENST00000510638	KIF5B	P33176	963 aa		10.11	□□□□□ -0.79
NFKB1-209	ENST00000510638	NOV	P48745	357 aa		10.11	□□□□□ -0.79
NFKB1-209	ENST00000510638	USP14	P54578	494 aa		10.11	□□□□□ -0.79
NFKB1-209	ENST00000510638	APOBR	Q0VD83	1088 aa		10.11	□□□□□ -0.79
NFKB1-209	ENST00000510638	COL9A3	Q14050	684 aa	Predicted RBP	10.11	□□□□□ -0.79
NFKB1-209	ENST00000510638	PPP2R5B	Q15173	497 aa		10.11	□□□□□ -0.79
NFKB1-209	ENST00000510638	RCSD1	Q6JBY9	416 aa		10.11	□□□□□ -0.79
NFKB1-209	ENST00000510638	CPLX2	Q6PUV4	134 aa	Known RBP	10.11	□□□□□ -0.79
NFKB1-209	ENST00000510638	APOA5	Q6Q788	366 aa		10.11	□□□□□ -0.79
NFKB1-209	ENST00000510638	PPP1R3F	Q6ZSY5	799 aa	Predicted RBP	10.11	□□□□□ -0.79
NFKB1-209	ENST00000510638	ERO1B	Q86YB8	467 aa		10.11	□□□□□ -0.79
NFKB1-209	ENST00000510638	ZNF654	Q8IZM8	581 aa		10.11	□□□□□ -0.79
NFKB1-209	ENST00000510638	ZNF280C	Q8ND82	737 aa		10.11	□□□□□ -0.79
NFKB1-209	ENST00000510638	NKX2-3	Q8TAU0	364 aa		10.11	□□□□□ -0.79
NFKB1-209	ENST00000510638	NUP133	Q8WUM0	1156 aa		10.11	□□□□□ -0.79
NFKB1-209	ENST00000510638	SLC10A4	Q96EP9	437 aa		10.11	□□□□□ -0.79
NFKB1-209	ENST00000510638	ZNF274	Q96GC6	653 aa	Predicted RBP	10.11	□□□□□ -0.79
NFKB1-209	ENST00000510638	TMEM47	Q9BQJ4	181 aa		10.11	□□□□□ -0.79
NFKB1-209	ENST00000510638	SLK	Q9H2G2	1235 aa	Predicted RBP	10.11	□□□□□ -0.79
NFKB1-209	ENST00000510638	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	10.11	□□□□□ -0.79
NFKB1-209	ENST00000510638	FZD1	Q9UP38	647 aa		10.11	□□□□□ -0.79
NFKB1-209	ENST00000510638	ZHX2	Q9Y6X8	837 aa		10.11	□□□□□ -0.79
NFKB1-209	ENST00000510638	ECM29	Q5VYK3	1845 aa		10.11	□□□□□ -0.79
NFKB1-209	ENST00000510638	FOCAD	Q5VW36	1801 aa		10.1	□□□□□ -0.79
NFKB1-209	ENST00000510638	GOLGA8A	A7E2F4	631 aa		10.1	□□□□□ -0.79
NFKB1-209	ENST00000510638	USP17L10	C9JJH3	530 aa		10.1	□□□□□ -0.79
NFKB1-209	ENST00000510638	UBE2Q2L	H0YL09	131 aa		10.1	□□□□□ -0.79
NFKB1-209	ENST00000510638		K7ELQ4	463 aa	Predicted RBP	10.1	□□□□□ -0.79
NFKB1-209	ENST00000510638	CPLX1	O14810	134 aa		10.1	□□□□□ -0.79
NFKB1-209	ENST00000510638	GUCY1A2	P33402	732 aa		10.1	□□□□□ -0.79
NFKB1-209	ENST00000510638	GNAQ	P50148	359 aa		10.1	□□□□□ -0.79
NFKB1-209	ENST00000510638	METAP2	P50579	478 aa	Known RBP eCLIP	10.1	□□□□□ -0.79
NFKB1-209	ENST00000510638	EVC	P57679	992 aa		10.1	□□□□□ -0.79
NFKB1-209	ENST00000510638	PPAT	Q06203	517 aa		10.1	□□□□□ -0.79
NFKB1-209	ENST00000510638	LDLRAD1	Q5T700	205 aa		10.1	□□□□□ -0.79
NFKB1-209	ENST00000510638	MICU3	Q86XE3	530 aa		10.1	□□□□□ -0.79
NFKB1-209	ENST00000510638	CLEC10A	Q8IUN9	316 aa		10.1	□□□□□ -0.79
NFKB1-209	ENST00000510638	LRRC47	Q8N1G4	583 aa	Known RBP	10.1	□□□□□ -0.79
NFKB1-209	ENST00000510638	CTCFL	Q8NI51	663 aa	Predicted RBP	10.1	□□□□□ -0.79
NFKB1-209	ENST00000510638	MKL1	Q969V6	931 aa		10.1	□□□□□ -0.79
NFKB1-209	ENST00000510638	CCDC102A	Q96A19	550 aa		10.1	□□□□□ -0.79
NFKB1-209	ENST00000510638	WDR18	Q9BV38	432 aa		10.1	□□□□□ -0.79
NFKB1-209	ENST00000510638	ELP3	Q9H9T3	547 aa		10.1	□□□□□ -0.79
NFKB1-209	ENST00000510638	GPHN	Q9NQX3	736 aa	Predicted RBP	10.1	□□□□□ -0.79
NFKB1-209	ENST00000510638	RBM28	Q9NW13	759 aa	Known RBP	10.1	□□□□□ -0.79
NFKB1-209	ENST00000510638	RNF186	Q9NXI6	227 aa		10.1	□□□□□ -0.79
NFKB1-209	ENST00000510638	TPCN1	Q9ULQ1	816 aa		10.1	□□□□□ -0.79
NFKB1-209	ENST00000510638	ISY1	Q9ULR0	285 aa	Known RBP	10.1	□□□□□ -0.79
NFKB1-209	ENST00000510638	TMX2	Q9Y320	296 aa		10.1	□□□□□ -0.79
NFKB1-209	ENST00000510638	SNCAIP	Q9Y6H5	919 aa		10.1	□□□□□ -0.79
NFKB1-209	ENST00000510638	LAMB1	P07942	1786 aa		10.1	□□□□□ -0.79

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