RNA–Protein interactions for RNA: ENST00000510171.3

DDX41-211, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-211ENST00000510171 SHCBP1Q8NEM2 672 aa12.62□□□□□ -0.39
DDX41-211ENST00000510171 FAM161BQ96MY7 647 aa12.62□□□□□ -0.39
DDX41-211ENST00000510171 EXOC6BQ9Y2D4 811 aa12.62□□□□□ -0.39
DDX41-211ENST00000510171 ATP11BQ9Y2G3 1177 aa12.62□□□□□ -0.39
DDX41-211ENST00000510171 PLXNB2O15031 1838 aa12.62□□□□□ -0.39
DDX41-211ENST00000510171 SEPT4O43236 478 aa12.61□□□□□ -0.39
DDX41-211ENST00000510171 MYCNP04198 464 aaPredicted RBP12.61□□□□□ -0.39
DDX41-211ENST00000510171 RLBP1P12271 317 aa12.61□□□□□ -0.39
DDX41-211ENST00000510171 PDE6AP16499 860 aa12.61□□□□□ -0.39
DDX41-211ENST00000510171 ANO1Q5XXA6 986 aa12.61□□□□□ -0.39
DDX41-211ENST00000510171 TMEM179Q6ZVK1 233 aa12.61□□□□□ -0.39
DDX41-211ENST00000510171 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.61□□□□□ -0.39
DDX41-211ENST00000510171 GUCD1Q96NT3 240 aa12.61□□□□□ -0.39
DDX41-211ENST00000510171 MROH8Q9H579 483 aa12.61□□□□□ -0.39
DDX41-211ENST00000510171 LAMA3Q16787 3333 aa12.61□□□□□ -0.39
DDX41-211ENST00000510171 ALPK3Q96L96 1907 aa12.6□□□□□ -0.39
DDX41-211ENST00000510171 SIPA1L1O43166 1804 aa12.6□□□□□ -0.39
DDX41-211ENST00000510171 DSG3P32926 999 aa12.6□□□□□ -0.39
DDX41-211ENST00000510171 PLS1Q14651 629 aa12.6□□□□□ -0.39
DDX41-211ENST00000510171 SHHQ15465 462 aa12.6□□□□□ -0.39
DDX41-211ENST00000510171 KIAA1755Q5JYT7 1200 aa12.6□□□□□ -0.39
DDX41-211ENST00000510171 PRAMEF19Q5SWL8 479 aa12.6□□□□□ -0.39
DDX41-211ENST00000510171 ZNF697Q5TEC3 545 aa12.6□□□□□ -0.39
DDX41-211ENST00000510171 NCAPG2Q86XI2 1143 aa12.6□□□□□ -0.39
DDX41-211ENST00000510171 ABRAQ8N0Z2 381 aa12.6□□□□□ -0.39
DDX41-211ENST00000510171 SDR42E1Q8WUS8 393 aa12.6□□□□□ -0.39
DDX41-211ENST00000510171 IL1RAPL2Q9NP60 686 aa12.6□□□□□ -0.39
DDX41-211ENST00000510171 DCP1AQ9NPI6 582 aaPredicted RBP12.6□□□□□ -0.39
DDX41-211ENST00000510171 PRDM5Q9NQX1 630 aaPredicted RBP12.6□□□□□ -0.39
DDX41-211ENST00000510171 SWAP70Q9UH65 585 aa12.6□□□□□ -0.39
DDX41-211ENST00000510171 ATAD5Q96QE3 1844 aa12.6□□□□□ -0.39
DDX41-211ENST00000510171 ZNF532Q9HCE3 1301 aa12.6□□□□□ -0.39
DDX41-211ENST00000510171 FLOT1O75955 427 aa12.59□□□□□ -0.39
DDX41-211ENST00000510171 CYP2D6P10635 497 aa12.59□□□□□ -0.39
DDX41-211ENST00000510171 FCER1AP12319 257 aa12.59□□□□□ -0.39
DDX41-211ENST00000510171 ADCYAP1R1P41586 468 aa12.59□□□□□ -0.39
DDX41-211ENST00000510171 EVX2Q03828 476 aa12.59□□□□□ -0.39
DDX41-211ENST00000510171 TRIM60Q495X7 471 aa12.59□□□□□ -0.39
DDX41-211ENST00000510171 SIAH1Q8IUQ4 282 aa12.59□□□□□ -0.39
DDX41-211ENST00000510171 CLASRPQ8N2M8 674 aaKnown RBP12.59□□□□□ -0.39
DDX41-211ENST00000510171 SLC44A5Q8NCS7 719 aa12.59□□□□□ -0.39
DDX41-211ENST00000510171 RHPN1Q8TCX5 695 aa12.59□□□□□ -0.39
DDX41-211ENST00000510171 BADQ92934 168 aa12.59□□□□□ -0.39
DDX41-211ENST00000510171 COL25A1Q9BXS0 654 aaPredicted RBP12.59□□□□□ -0.39
DDX41-211ENST00000510171 SH2D4AQ9H788 454 aa12.59□□□□□ -0.39
DDX41-211ENST00000510171 ARHGEF10LQ9HCE6 1279 aa12.59□□□□□ -0.39
DDX41-211ENST00000510171 TMX2Q9Y320 296 aa12.59□□□□□ -0.39
DDX41-211ENST00000510171 TCRBV5S4A2TA0A5A2 114 aa12.58□□□□□ -0.4
DDX41-211ENST00000510171 GOLIM4O00461 696 aa12.58□□□□□ -0.4
DDX41-211ENST00000510171 SLC25A27O95847 323 aa12.58□□□□□ -0.4
DDX41-211ENST00000510171 IFIT2P09913 472 aaKnown RBP12.58□□□□□ -0.4
DDX41-211ENST00000510171 SNX17Q15036 470 aa12.58□□□□□ -0.4
DDX41-211ENST00000510171 LRRC41Q15345 812 aa12.58□□□□□ -0.4
DDX41-211ENST00000510171 SAMD1Q6SPF0 538 aaPredicted RBP12.58□□□□□ -0.4
DDX41-211ENST00000510171 SPICE1Q8N0Z3 855 aa12.58□□□□□ -0.4
DDX41-211ENST00000510171 LCORLQ8N3X6 602 aa12.58□□□□□ -0.4
DDX41-211ENST00000510171 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.58□□□□□ -0.4
DDX41-211ENST00000510171 FERMT2Q96AC1 680 aa12.58□□□□□ -0.4
DDX41-211ENST00000510171 ATG4CQ96DT6 458 aa12.58□□□□□ -0.4
DDX41-211ENST00000510171 DYNLL2Q96FJ2 89 aa12.58□□□□□ -0.4
DDX41-211ENST00000510171 MAML3Q96JK9 1138 aa12.58□□□□□ -0.4
DDX41-211ENST00000510171 CCDC17Q96LX7 622 aa12.58□□□□□ -0.4
DDX41-211ENST00000510171 DNAJC2Q99543 621 aaKnown RBP12.58□□□□□ -0.4
DDX41-211ENST00000510171 SEMA6BQ9H3T3 888 aa12.58□□□□□ -0.4
DDX41-211ENST00000510171 VCPKMTQ9H867 229 aa12.58□□□□□ -0.4
DDX41-211ENST00000510171 ZBED9Q6R2W3 1325 aa12.58□□□□□ -0.4
DDX41-211ENST00000510171 MAST2Q6P0Q8 1798 aa12.57□□□□□ -0.4
DDX41-211ENST00000510171 APBB1O00213 710 aa12.57□□□□□ -0.4
DDX41-211ENST00000510171 AKR1B1P15121 316 aa12.57□□□□□ -0.4
DDX41-211ENST00000510171 ICA1Q05084 483 aa12.57□□□□□ -0.4
DDX41-211ENST00000510171 TMEM132BQ14DG7 1078 aa12.57□□□□□ -0.4
DDX41-211ENST00000510171 C9orf50Q5SZB4 431 aa12.57□□□□□ -0.4
DDX41-211ENST00000510171 C1orf53Q5VUE5 145 aa12.57□□□□□ -0.4
DDX41-211ENST00000510171 KIF1BPQ96EK5 621 aa12.57□□□□□ -0.4
DDX41-211ENST00000510171 CDX2Q99626 313 aaPredicted RBP12.57□□□□□ -0.4
DDX41-211ENST00000510171 BCL11AQ9H165 835 aa12.57□□□□□ -0.4
DDX41-211ENST00000510171 ARMT1Q9H993 441 aa12.57□□□□□ -0.4
DDX41-211ENST00000510171 ATP8A2Q9NTI2 1148 aa12.57□□□□□ -0.4
DDX41-211ENST00000510171 NRBP1Q9UHY1 535 aa12.57□□□□□ -0.4
DDX41-211ENST00000510171 COL6A3P12111 3177 aa12.57□□□□□ -0.4
DDX41-211ENST00000510171 TRIM43BA6NCK2 446 aa12.56□□□□□ -0.4
DDX41-211ENST00000510171 WDR46O15213 610 aaKnown RBP12.56□□□□□ -0.4
DDX41-211ENST00000510171 RARBP10826 455 aa12.56□□□□□ -0.4
DDX41-211ENST00000510171 SMAD3P84022 425 aaKnown RBP12.56□□□□□ -0.4
DDX41-211ENST00000510171 TLE2Q04725 743 aa12.56□□□□□ -0.4
DDX41-211ENST00000510171 FAM47AQ5JRC9 791 aa12.56□□□□□ -0.4
DDX41-211ENST00000510171 SH3RF1Q7Z6J0 888 aa12.56□□□□□ -0.4
DDX41-211ENST00000510171 AMOTL1Q8IY63 956 aa12.56□□□□□ -0.4
DDX41-211ENST00000510171 TRIM43Q96BQ3 446 aaPredicted RBP12.56□□□□□ -0.4
DDX41-211ENST00000510171 MMP19Q99542 508 aa12.56□□□□□ -0.4
DDX41-211ENST00000510171 XPNPEP3Q9NQH7 507 aa12.56□□□□□ -0.4
DDX41-211ENST00000510171 PDLIM7Q9NR12 457 aa12.56□□□□□ -0.4
DDX41-211ENST00000510171 TACC3Q9Y6A5 838 aa12.56□□□□□ -0.4
DDX41-211ENST00000510171 PRKAB2O43741 272 aa12.55□□□□□ -0.4
DDX41-211ENST00000510171 MBD4O95243 580 aa12.55□□□□□ -0.4
DDX41-211ENST00000510171 CDK8P49336 464 aa12.55□□□□□ -0.4
DDX41-211ENST00000510171 KCTD2Q14681 263 aa12.55□□□□□ -0.4
DDX41-211ENST00000510171 C12orf60Q5U649 245 aa12.55□□□□□ -0.4
DDX41-211ENST00000510171 RNF180Q86T96 592 aa12.55□□□□□ -0.4
DDX41-211ENST00000510171 CLEC10AQ8IUN9 316 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms