RNA–Protein interactions for RNA: ENST00000509774.5

PTPN20-222, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 788 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-222ENST00000509774 PDE1AP54750 535 aa12.41□□□□□ -0.42
PTPN20-222ENST00000509774 PTPN5P54829 565 aa12.41□□□□□ -0.42
PTPN20-222ENST00000509774 MECOMQ03112 1051 aa12.41□□□□□ -0.42
PTPN20-222ENST00000509774 SHHQ15465 462 aa12.41□□□□□ -0.42
PTPN20-222ENST00000509774 GRIK5Q16478 980 aa12.41□□□□□ -0.42
PTPN20-222ENST00000509774 B4GALNT3Q6L9W6 998 aa12.41□□□□□ -0.42
PTPN20-222ENST00000509774 PI16Q6UXB8 463 aa12.41□□□□□ -0.42
PTPN20-222ENST00000509774 NSUN4Q96CB9 384 aaKnown RBP12.41□□□□□ -0.42
PTPN20-222ENST00000509774 CCDC136Q96JN2 1154 aa12.41□□□□□ -0.42
PTPN20-222ENST00000509774 SLC4A5Q9BY07 1137 aa12.41□□□□□ -0.42
PTPN20-222ENST00000509774 LNPKQ9C0E8 428 aa12.41□□□□□ -0.42
PTPN20-222ENST00000509774 BOLA2Q9H3K6 86 aa12.41□□□□□ -0.42
PTPN20-222ENST00000509774 HMX1Q9NP08 348 aaPredicted RBP12.41□□□□□ -0.42
PTPN20-222ENST00000509774 PAG1Q9NWQ8 432 aa12.41□□□□□ -0.42
PTPN20-222ENST00000509774 RAI14Q9P0K7 980 aa12.41□□□□□ -0.42
PTPN20-222ENST00000509774 PHIPQ8WWQ0 1821 aa12.4□□□□□ -0.42
PTPN20-222ENST00000509774 CACNB3P54284 484 aa12.4□□□□□ -0.42
PTPN20-222ENST00000509774 SMAD3P84022 425 aaKnown RBP12.4□□□□□ -0.42
PTPN20-222ENST00000509774 C9orf50Q5SZB4 431 aa12.4□□□□□ -0.42
PTPN20-222ENST00000509774 ZSCAN25Q6NSZ9 544 aa12.4□□□□□ -0.42
PTPN20-222ENST00000509774 APOBEC3HQ6NTF7 200 aaKnown RBP12.4□□□□□ -0.42
PTPN20-222ENST00000509774 TBC1D9Q6ZT07 1266 aa12.4□□□□□ -0.42
PTPN20-222ENST00000509774 ATXN2LQ8WWM7 1075 aaKnown RBP12.4□□□□□ -0.42
PTPN20-222ENST00000509774 ASB2Q96Q27 587 aa12.4□□□□□ -0.42
PTPN20-222ENST00000509774 UHRF1Q96T88 793 aaPredicted RBP12.4□□□□□ -0.42
PTPN20-222ENST00000509774 C1QTNF1Q9BXJ1 281 aa12.4□□□□□ -0.42
PTPN20-222ENST00000509774 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.4□□□□□ -0.42
PTPN20-222ENST00000509774 PPP4R2Q9NY27 417 aa12.4□□□□□ -0.42
PTPN20-222ENST00000509774 GAKO14976 1311 aa12.39□□□□□ -0.43
PTPN20-222ENST00000509774 GPR75-ASB3A0A0A6YYF3 556 aa12.39□□□□□ -0.43
PTPN20-222ENST00000509774 BAG3O95817 575 aa12.39□□□□□ -0.43
PTPN20-222ENST00000509774 PPP4CP60510 307 aa12.39□□□□□ -0.43
PTPN20-222ENST00000509774 NAA16Q6N069 864 aaPredicted RBP12.39□□□□□ -0.43
PTPN20-222ENST00000509774 ALYREFQ86V81 257 aaKnown RBP12.39□□□□□ -0.43
PTPN20-222ENST00000509774 PI4K2BQ8TCG2 481 aa12.39□□□□□ -0.43
PTPN20-222ENST00000509774 ZBED2Q9BTP6 218 aa12.39□□□□□ -0.43
PTPN20-222ENST00000509774 BCL11AQ9H165 835 aa12.39□□□□□ -0.43
PTPN20-222ENST00000509774 EMILIN3Q9NT22 766 aa12.39□□□□□ -0.43
PTPN20-222ENST00000509774 TMOD2Q9NZR1 351 aa12.39□□□□□ -0.43
PTPN20-222ENST00000509774 HCN4Q9Y3Q4 1203 aa12.39□□□□□ -0.43
PTPN20-222ENST00000509774 MROH7-TTC4A0A0A0MT08 1334 aa12.38□□□□□ -0.43
PTPN20-222ENST00000509774 GOLIM4O00461 696 aa12.38□□□□□ -0.43
PTPN20-222ENST00000509774 IDH1O75874 414 aaKnown RBP12.38□□□□□ -0.43
PTPN20-222ENST00000509774 ZFYP08048 801 aaPredicted RBP12.38□□□□□ -0.43
PTPN20-222ENST00000509774 MIGA2Q7L4E1 593 aa12.38□□□□□ -0.43
PTPN20-222ENST00000509774 FAM83AQ86UY5 434 aa12.38□□□□□ -0.43
PTPN20-222ENST00000509774 PLEKHM2Q8IWE5 1019 aa12.38□□□□□ -0.43
PTPN20-222ENST00000509774 KBTBD3Q8NAB2 608 aa12.38□□□□□ -0.43
PTPN20-222ENST00000509774 COA7Q96BR5 231 aa12.38□□□□□ -0.43
PTPN20-222ENST00000509774 DNAJC2Q99543 621 aaKnown RBP12.38□□□□□ -0.43
PTPN20-222ENST00000509774 NOL10Q9BSC4 688 aaKnown RBP12.38□□□□□ -0.43
PTPN20-222ENST00000509774 LRFN3Q9BTN0 628 aa12.38□□□□□ -0.43
PTPN20-222ENST00000509774 ANTXR1Q9H6X2 564 aa12.38□□□□□ -0.43
PTPN20-222ENST00000509774 PIH1D3Q9NQM4 214 aaKnown RBP12.38□□□□□ -0.43
PTPN20-222ENST00000509774 DAGLAQ9Y4D2 1042 aa12.38□□□□□ -0.43
PTPN20-222ENST00000509774 RLFQ13129 1914 aa12.38□□□□□ -0.43
PTPN20-222ENST00000509774 GOLGA8CPA6NN73 597 aa12.37□□□□□ -0.43
PTPN20-222ENST00000509774 GRIN2CQ14957 1233 aa12.37□□□□□ -0.43
PTPN20-222ENST00000509774 UBE3CQ15386 1083 aa12.37□□□□□ -0.43
PTPN20-222ENST00000509774 DIXDC1Q155Q3 683 aa12.37□□□□□ -0.43
PTPN20-222ENST00000509774 SLC9C2Q5TAH2 1124 aa12.37□□□□□ -0.43
PTPN20-222ENST00000509774 OTUD7AQ8TE49 926 aaPredicted RBP12.37□□□□□ -0.43
PTPN20-222ENST00000509774 EVI5LQ96CN4 794 aa12.37□□□□□ -0.43
PTPN20-222ENST00000509774 ZNF341Q9BYN7 854 aa12.37□□□□□ -0.43
PTPN20-222ENST00000509774 MAP3K21Q5TCX8 1036 aa12.36□□□□□ -0.43
PTPN20-222ENST00000509774 DCAF15Q66K64 600 aa12.36□□□□□ -0.43
PTPN20-222ENST00000509774 ZNF384Q8TF68 577 aa12.36□□□□□ -0.43
PTPN20-222ENST00000509774 HOOK2Q96ED9 719 aa12.36□□□□□ -0.43
PTPN20-222ENST00000509774 NECAB3Q96P71 396 aaPredicted RBP12.36□□□□□ -0.43
PTPN20-222ENST00000509774 IDI2Q9BXS1 227 aa12.36□□□□□ -0.43
PTPN20-222ENST00000509774 USP40Q9NVE5 1235 aa12.36□□□□□ -0.43
PTPN20-222ENST00000509774 THEGQ9P2T0 379 aa12.36□□□□□ -0.43
PTPN20-222ENST00000509774 GJD2Q9UKL4 321 aa12.36□□□□□ -0.43
PTPN20-222ENST00000509774 REV3LO60673 3130 aa12.36□□□□□ -0.43
PTPN20-222ENST00000509774 RPAP1Q9BWH6 1393 aaPredicted RBP12.35□□□□□ -0.43
PTPN20-222ENST00000509774 BHMG1C9JSJ3 638 aaPredicted RBP12.35□□□□□ -0.43
PTPN20-222ENST00000509774 CXCL11O14625 94 aa12.35□□□□□ -0.43
PTPN20-222ENST00000509774 CYP7A1P22680 504 aa12.35□□□□□ -0.43
PTPN20-222ENST00000509774 BTDP43251 543 aa12.35□□□□□ -0.43
PTPN20-222ENST00000509774 CDC42EP5Q6NZY7 148 aa12.35□□□□□ -0.43
PTPN20-222ENST00000509774 ANKRD13CQ8N6S4 541 aa12.35□□□□□ -0.43
PTPN20-222ENST00000509774 MAGEB6Q8N7X4 407 aa12.35□□□□□ -0.43
PTPN20-222ENST00000509774 TRIB2Q92519 343 aa12.35□□□□□ -0.43
PTPN20-222ENST00000509774 ZNF112Q9UJU3 913 aa12.35□□□□□ -0.43
PTPN20-222ENST00000509774 NDUFB9Q9Y6M9 179 aa12.35□□□□□ -0.43
PTPN20-222ENST00000509774 PLXNA1Q9UIW2 1896 aa12.34□□□□□ -0.43
PTPN20-222ENST00000509774 A0A0G2JLL6 359 aaPredicted RBP12.34□□□□□ -0.43
PTPN20-222ENST00000509774 ENTPD3O75355 529 aa12.34□□□□□ -0.43
PTPN20-222ENST00000509774 PDE6AP16499 860 aa12.34□□□□□ -0.43
PTPN20-222ENST00000509774 ADD2P35612 726 aa12.34□□□□□ -0.43
PTPN20-222ENST00000509774 RHBDL3P58872 404 aa12.34□□□□□ -0.43
PTPN20-222ENST00000509774 MRPS5P82675 430 aaKnown RBP12.34□□□□□ -0.43
PTPN20-222ENST00000509774 NOL9Q5SY16 702 aaKnown RBP12.34□□□□□ -0.43
PTPN20-222ENST00000509774 PRRT2Q7Z6L0 340 aaPredicted RBP12.34□□□□□ -0.43
PTPN20-222ENST00000509774 SMCR8Q8TEV9 937 aaPredicted RBP12.34□□□□□ -0.43
PTPN20-222ENST00000509774 FAM151AQ8WW52 585 aa12.34□□□□□ -0.43
PTPN20-222ENST00000509774 DOCK1Q14185 1865 aa12.34□□□□□ -0.43
PTPN20-222ENST00000509774 DOCK2Q92608 1830 aa12.33□□□□□ -0.44
PTPN20-222ENST00000509774 TCRBV5S4A2TA0A5A2 114 aa12.33□□□□□ -0.44
PTPN20-222ENST00000509774 RNF113AO15541 343 aaKnown RBP12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms