RNA–Protein interactions for RNA: ENST00000509102.5

UBE3D-207, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,246 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-207ENST00000509102 GOPCQ9HD26 462 aa22.26■■□□□ 1.15
UBE3D-207ENST00000509102 TXNRD2Q9NNW7 524 aa22.26■■□□□ 1.15
UBE3D-207ENST00000509102 TMX2Q9Y320 296 aa22.26■■□□□ 1.15
UBE3D-207ENST00000509102 ROBO3Q96MS0 1386 aa22.25■■□□□ 1.15
UBE3D-207ENST00000509102 TNRC18O15417 2968 aaPredicted RBP22.25■■□□□ 1.15
UBE3D-207ENST00000509102 TRIM6-TRIM34B2RNG4 842 aa22.25■■□□□ 1.15
UBE3D-207ENST00000509102 INHAP05111 366 aa22.25■■□□□ 1.15
UBE3D-207ENST00000509102 COG2Q14746 738 aa22.25■■□□□ 1.15
UBE3D-207ENST00000509102 LBX2Q6XYB7 198 aa22.25■■□□□ 1.15
UBE3D-207ENST00000509102 CHD1LQ86WJ1 897 aa22.25■■□□□ 1.15
UBE3D-207ENST00000509102 ZNF444Q8N0Y2 327 aaPredicted RBP22.25■■□□□ 1.15
UBE3D-207ENST00000509102 STK11IPQ8N1F8 1099 aa22.25■■□□□ 1.15
UBE3D-207ENST00000509102 SEC62Q99442 399 aaKnown RBP22.25■■□□□ 1.15
UBE3D-207ENST00000509102 VCPKMTQ9H867 229 aa22.25■■□□□ 1.15
UBE3D-207ENST00000509102 SMIM22K7EJ46 135 aa22.24■■□□□ 1.15
UBE3D-207ENST00000509102 GJB1P08034 283 aa22.24■■□□□ 1.15
UBE3D-207ENST00000509102 PDE4BQ07343 736 aa22.24■■□□□ 1.15
UBE3D-207ENST00000509102 EPB41L4AQ9HCS5 686 aaPredicted RBP22.24■■□□□ 1.15
UBE3D-207ENST00000509102 PDE4DIPQ5VU43 2346 aa22.23■■□□□ 1.15
UBE3D-207ENST00000509102 WDR46O15213 610 aaKnown RBP22.23■■□□□ 1.15
UBE3D-207ENST00000509102 RAD21O60216 631 aa22.23■■□□□ 1.15
UBE3D-207ENST00000509102 HMGCRP04035 888 aa22.23■■□□□ 1.15
UBE3D-207ENST00000509102 EEF2P13639 858 aaKnown RBP22.23■■□□□ 1.15
UBE3D-207ENST00000509102 WDR78Q5VTH9 848 aa22.23■■□□□ 1.15
UBE3D-207ENST00000509102 PLEKHH3Q7Z736 793 aa22.23■■□□□ 1.15
UBE3D-207ENST00000509102 CLEC10AQ8IUN9 316 aa22.23■■□□□ 1.15
UBE3D-207ENST00000509102 TRMT44Q8IYL2 757 aaKnown RBP22.23■■□□□ 1.15
UBE3D-207ENST00000509102 HELLSQ9NRZ9 838 aa22.23■■□□□ 1.15
UBE3D-207ENST00000509102 IVNS1ABPQ9Y6Y0 642 aa22.23■■□□□ 1.15
UBE3D-207ENST00000509102 SPDYE16A6NNV3 312 aaPredicted RBP22.22■■□□□ 1.15
UBE3D-207ENST00000509102 FLOT1O75955 427 aa22.22■■□□□ 1.15
UBE3D-207ENST00000509102 IGHDP01880 384 aa22.22■■□□□ 1.15
UBE3D-207ENST00000509102 CAPN2P17655 700 aa22.22■■□□□ 1.15
UBE3D-207ENST00000509102 RASA1P20936 1047 aa22.22■■□□□ 1.15
UBE3D-207ENST00000509102 NUCB1Q02818 461 aa22.22■■□□□ 1.15
UBE3D-207ENST00000509102 Q3C1V9 767 aa22.22■■□□□ 1.15
UBE3D-207ENST00000509102 GPR142Q7Z601 462 aa22.22■■□□□ 1.15
UBE3D-207ENST00000509102 SPICE1Q8N0Z3 855 aa22.22■■□□□ 1.15
UBE3D-207ENST00000509102 MB21D1Q8N884 522 aa22.22■■□□□ 1.15
UBE3D-207ENST00000509102 GJD2Q9UKL4 321 aa22.22■■□□□ 1.15
UBE3D-207ENST00000509102 PEX10O60683 326 aa22.21■■□□□ 1.15
UBE3D-207ENST00000509102 CYP2B6P20813 491 aa22.21■■□□□ 1.15
UBE3D-207ENST00000509102 RGS2P41220 211 aa22.21■■□□□ 1.15
UBE3D-207ENST00000509102 GJA8P48165 433 aa22.21■■□□□ 1.15
UBE3D-207ENST00000509102 RILPL2Q969X0 211 aa22.21■■□□□ 1.15
UBE3D-207ENST00000509102 PORCNQ9H237 461 aa22.21■■□□□ 1.15
UBE3D-207ENST00000509102 XRCC5P13010 732 aaKnown RBP22.2■■□□□ 1.14
UBE3D-207ENST00000509102 PRPF38BQ5VTL8 546 aaKnown RBP22.2■■□□□ 1.14
UBE3D-207ENST00000509102 SIAH1Q8IUQ4 282 aa22.2■■□□□ 1.14
UBE3D-207ENST00000509102 UNC93B1Q9H1C4 597 aa22.2■■□□□ 1.14
UBE3D-207ENST00000509102 CNMDO75829 334 aa22.19■■□□□ 1.14
UBE3D-207ENST00000509102 TSPY3P0CV98 308 aa22.19■■□□□ 1.14
UBE3D-207ENST00000509102 TSPY8P0CW00 308 aa22.19■■□□□ 1.14
UBE3D-207ENST00000509102 PPARAQ07869 468 aa22.19■■□□□ 1.14
UBE3D-207ENST00000509102 NYAP2Q9P242 653 aa22.19■■□□□ 1.14
UBE3D-207ENST00000509102 DOCK3Q8IZD9 2030 aa22.18■■□□□ 1.14
UBE3D-207ENST00000509102 PRDM1O75626 825 aa22.18■■□□□ 1.14
UBE3D-207ENST00000509102 ZKSCAN1P17029 563 aaPredicted RBP22.18■■□□□ 1.14
UBE3D-207ENST00000509102 MFAP1P55081 439 aaKnown RBP22.18■■□□□ 1.14
UBE3D-207ENST00000509102 MCMDC2Q4G0Z9 681 aa22.18■■□□□ 1.14
UBE3D-207ENST00000509102 PPP4R3BQ5MIZ7 849 aa22.18■■□□□ 1.14
UBE3D-207ENST00000509102 SAMD1Q6SPF0 538 aaPredicted RBP22.18■■□□□ 1.14
UBE3D-207ENST00000509102 CCDC129Q6ZRS4 1044 aa22.18■■□□□ 1.14
UBE3D-207ENST00000509102 U2AF1L4Q8WU68 220 aaKnown RBP22.18■■□□□ 1.14
UBE3D-207ENST00000509102 APBA2Q99767 749 aa22.18■■□□□ 1.14
UBE3D-207ENST00000509102 OSBPL3Q9H4L5 887 aa22.18■■□□□ 1.14
UBE3D-207ENST00000509102 HMX1Q9NP08 348 aaPredicted RBP22.18■■□□□ 1.14
UBE3D-207ENST00000509102 BTBD7Q9P203 1132 aa22.18■■□□□ 1.14
UBE3D-207ENST00000509102 SLC15A5A6NIM6 579 aa22.17■■□□□ 1.14
UBE3D-207ENST00000509102 DSG3P32926 999 aa22.17■■□□□ 1.14
UBE3D-207ENST00000509102 PLS1Q14651 629 aa22.17■■□□□ 1.14
UBE3D-207ENST00000509102 DEFB118Q96PH6 123 aa22.17■■□□□ 1.14
UBE3D-207ENST00000509102 SPATC1LQ9H0A9 340 aa22.17■■□□□ 1.14
UBE3D-207ENST00000509102 BRCA2P51587 3418 aa22.16■■□□□ 1.14
UBE3D-207ENST00000509102 RPTORQ8N122 1335 aa22.16■■□□□ 1.14
UBE3D-207ENST00000509102 SGPL1O95470 568 aa22.16■■□□□ 1.14
UBE3D-207ENST00000509102 TFRCP02786 760 aaKnown RBP22.16■■□□□ 1.14
UBE3D-207ENST00000509102 MAP2K5Q13163 448 aa22.16■■□□□ 1.14
UBE3D-207ENST00000509102 KIAA1755Q5JYT7 1200 aa22.16■■□□□ 1.14
UBE3D-207ENST00000509102 MORN1Q5T089 497 aa22.16■■□□□ 1.14
UBE3D-207ENST00000509102 POTEEQ6S8J3 1075 aa22.16■■□□□ 1.14
UBE3D-207ENST00000509102 PLEKHM2Q8IWE5 1019 aa22.16■■□□□ 1.14
UBE3D-207ENST00000509102 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.16■■□□□ 1.14
UBE3D-207ENST00000509102 XRN2Q9H0D6 950 aaKnown RBP eCLIP22.16■■□□□ 1.14
UBE3D-207ENST00000509102 CLIP2Q9UDT6 1046 aa22.16■■□□□ 1.14
UBE3D-207ENST00000509102 SYNPO2Q9UMS6 1093 aa22.16■■□□□ 1.14
UBE3D-207ENST00000509102 TTLL1O95922 423 aa22.15■■□□□ 1.14
UBE3D-207ENST00000509102 PTPREP23469 700 aa22.15■■□□□ 1.14
UBE3D-207ENST00000509102 SHCBP1Q8NEM2 672 aa22.15■■□□□ 1.14
UBE3D-207ENST00000509102 TRIB2Q92519 343 aa22.15■■□□□ 1.14
UBE3D-207ENST00000509102 ATG4CQ96DT6 458 aa22.15■■□□□ 1.14
UBE3D-207ENST00000509102 FAM227BQ96M60 508 aa22.15■■□□□ 1.14
UBE3D-207ENST00000509102 PAK6Q9NQU5 681 aaPredicted RBP22.15■■□□□ 1.14
UBE3D-207ENST00000509102 HIP1O00291 1037 aa22.14■■□□□ 1.13
UBE3D-207ENST00000509102 STRNO43815 780 aa22.14■■□□□ 1.13
UBE3D-207ENST00000509102 TFAP4Q01664 338 aa22.14■■□□□ 1.13
UBE3D-207ENST00000509102 FAM83BQ5T0W9 1011 aa22.14■■□□□ 1.13
UBE3D-207ENST00000509102 NEDD1Q8NHV4 660 aa22.14■■□□□ 1.13
UBE3D-207ENST00000509102 USP6NLQ92738 828 aa22.14■■□□□ 1.13
UBE3D-207ENST00000509102 SHISA4Q96DD7 197 aa22.14■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms