RNA–Protein interactions for RNA: ENST00000508282.1

DHFR-204, Transcript of dihydrofolate reductase, humanhuman

TSL 3

Gene DHFR, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-204ENST00000508282 PPT2Q9UMR5 302 aa8.46□□□□□ -1.06
DHFR-204ENST00000508282 LRRN4CLQ8ND94 238 aa8.45□□□□□ -1.06
DHFR-204ENST00000508282 RC3H2Q9HBD1 1191 aaKnown RBP8.45□□□□□ -1.06
DHFR-204ENST00000508282 GINM1Q9NU53 330 aa8.45□□□□□ -1.06
DHFR-204ENST00000508282 TNFRSF10CO14798 259 aa8.44□□□□□ -1.06
DHFR-204ENST00000508282 ITGB5P18084 799 aa8.44□□□□□ -1.06
DHFR-204ENST00000508282 GPRASP2Q96D09 838 aa8.44□□□□□ -1.06
DHFR-204ENST00000508282 FERD3LQ96RJ6 166 aa8.44□□□□□ -1.06
DHFR-204ENST00000508282 SLC9A7Q96T83 725 aa8.44□□□□□ -1.06
DHFR-204ENST00000508282 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.44□□□□□ -1.06
DHFR-204ENST00000508282 ESR1P03372 595 aa8.43□□□□□ -1.06
DHFR-204ENST00000508282 IMPDH2P12268 514 aa8.43□□□□□ -1.06
DHFR-204ENST00000508282 CCNFP41002 786 aa8.43□□□□□ -1.06
DHFR-204ENST00000508282 GJA8P48165 433 aa8.43□□□□□ -1.06
DHFR-204ENST00000508282 GAB4Q2WGN9 574 aa8.43□□□□□ -1.06
DHFR-204ENST00000508282 RASGRP4Q8TDF6 673 aa8.43□□□□□ -1.06
DHFR-204ENST00000508282 TGIF2Q9GZN2 237 aa8.43□□□□□ -1.06
DHFR-204ENST00000508282 TRIT1Q9H3H1 467 aaKnown RBP8.43□□□□□ -1.06
DHFR-204ENST00000508282 GPATCH2Q9NW75 528 aa8.43□□□□□ -1.06
DHFR-204ENST00000508282 SHISA3A0PJX4 238 aa8.42□□□□□ -1.06
DHFR-204ENST00000508282 ACRP10323 421 aa8.42□□□□□ -1.06
DHFR-204ENST00000508282 TPP2P29144 1249 aaPredicted RBP8.42□□□□□ -1.06
DHFR-204ENST00000508282 CHMP4BP1P59074 171 aa8.42□□□□□ -1.06
DHFR-204ENST00000508282 NBPF12Q5TAG4 269 aaPredicted RBP8.42□□□□□ -1.06
DHFR-204ENST00000508282 TMPRSS7Q7RTY8 843 aa8.42□□□□□ -1.06
DHFR-204ENST00000508282 TMEM192Q8IY95 271 aa8.42□□□□□ -1.06
DHFR-204ENST00000508282 ACBD3Q9H3P7 528 aa8.42□□□□□ -1.06
DHFR-204ENST00000508282 EFR3BQ9Y2G0 817 aa8.42□□□□□ -1.06
DHFR-204ENST00000508282 PAPLNO95428 1278 aa8.41□□□□□ -1.06
DHFR-204ENST00000508282 SOX9P48436 509 aa8.41□□□□□ -1.06
DHFR-204ENST00000508282 RNF4P78317 190 aa8.41□□□□□ -1.06
DHFR-204ENST00000508282 COL9A2Q14055 689 aaPredicted RBP8.41□□□□□ -1.06
DHFR-204ENST00000508282 FBXW10Q5XX13 1052 aa8.41□□□□□ -1.06
DHFR-204ENST00000508282 CCDC81Q6ZN84 652 aa8.41□□□□□ -1.06
DHFR-204ENST00000508282 TSPYL5Q86VY4 417 aaPredicted RBP8.41□□□□□ -1.06
DHFR-204ENST00000508282 RBBP8NLQ8NC74 664 aaPredicted RBP8.41□□□□□ -1.06
DHFR-204ENST00000508282 SPATA32Q96LK8 384 aa8.41□□□□□ -1.06
DHFR-204ENST00000508282 CLEC3AO75596 197 aa8.4□□□□□ -1.06
DHFR-204ENST00000508282 RBM25P49756 843 aaKnown RBP8.4□□□□□ -1.06
DHFR-204ENST00000508282 INTS3Q68E01 1043 aaKnown RBP8.4□□□□□ -1.06
DHFR-204ENST00000508282 ATG4DQ86TL0 474 aaPredicted RBP8.4□□□□□ -1.06
DHFR-204ENST00000508282 CREG2Q8IUH2 290 aa8.4□□□□□ -1.06
DHFR-204ENST00000508282 ZNF512BQ96KM6 892 aaPredicted RBP8.4□□□□□ -1.06
DHFR-204ENST00000508282 SLC6A18Q96N87 628 aa8.4□□□□□ -1.06
DHFR-204ENST00000508282 FAM86C2PA6NEL3 165 aa8.39□□□□□ -1.07
DHFR-204ENST00000508282 NBPF9Q3BBW0 867 aa8.39□□□□□ -1.07
DHFR-204ENST00000508282 RUFY4Q6ZNE9 571 aa8.39□□□□□ -1.07
DHFR-204ENST00000508282 LSRQ86X29 649 aaPredicted RBP8.39□□□□□ -1.07
DHFR-204ENST00000508282 TAB3Q8N5C8 712 aaPredicted RBP8.39□□□□□ -1.07
DHFR-204ENST00000508282 TM9SF2Q99805 663 aa8.39□□□□□ -1.07
DHFR-204ENST00000508282 KRTAP4-8Q9BYQ9 185 aa8.39□□□□□ -1.07
DHFR-204ENST00000508282 CCSER2Q9H7U1 834 aa8.39□□□□□ -1.07
DHFR-204ENST00000508282 C19orf73Q9NVV2 129 aa8.39□□□□□ -1.07
DHFR-204ENST00000508282 DUSP13Q9UII6 198 aa8.39□□□□□ -1.07
DHFR-204ENST00000508282 CTNND2Q9UQB3 1225 aa8.39□□□□□ -1.07
DHFR-204ENST00000508282 TCF3P15923 654 aa8.38□□□□□ -1.07
DHFR-204ENST00000508282 JUNBP17275 347 aaPredicted RBP8.38□□□□□ -1.07
DHFR-204ENST00000508282 NMIQ13287 307 aaPredicted RBP8.38□□□□□ -1.07
DHFR-204ENST00000508282 SNW1Q13573 536 aaKnown RBP8.38□□□□□ -1.07
DHFR-204ENST00000508282 FLAD1Q8NFF5 587 aa8.38□□□□□ -1.07
DHFR-204ENST00000508282 SLAMF8Q9P0V8 285 aa8.38□□□□□ -1.07
DHFR-204ENST00000508282 ZYXQ15942 572 aaKnown RBP8.37□□□□□ -1.07
DHFR-204ENST00000508282 TMC3Q7Z5M5 1100 aa8.37□□□□□ -1.07
DHFR-204ENST00000508282 ALPK1Q96QP1 1244 aa8.37□□□□□ -1.07
DHFR-204ENST00000508282 SUCOQ9UBS9 1254 aaKnown RBP8.37□□□□□ -1.07
DHFR-204ENST00000508282 INPP5FQ9Y2H2 1132 aa8.37□□□□□ -1.07
DHFR-204ENST00000508282 PCDHA11Q9Y5I1 949 aa8.37□□□□□ -1.07
DHFR-204ENST00000508282 DNAJC25-GNG10A0A024R161 153 aa8.36□□□□□ -1.07
DHFR-204ENST00000508282 BIN1O00499 593 aa8.36□□□□□ -1.07
DHFR-204ENST00000508282 GUCY2CP25092 1073 aa8.36□□□□□ -1.07
DHFR-204ENST00000508282 ERCC5P28715 1186 aaPredicted RBP8.36□□□□□ -1.07
DHFR-204ENST00000508282 NASPP49321 788 aaPredicted RBP8.36□□□□□ -1.07
DHFR-204ENST00000508282 EGR3Q06889 387 aa8.36□□□□□ -1.07
DHFR-204ENST00000508282 CLEC16AQ2KHT3 1053 aa8.36□□□□□ -1.07
DHFR-204ENST00000508282 RALGPS1Q5JS13 557 aa8.36□□□□□ -1.07
DHFR-204ENST00000508282 HDAC8Q9BY41 377 aa8.36□□□□□ -1.07
DHFR-204ENST00000508282 PRDM14Q9GZV8 571 aa8.36□□□□□ -1.07
DHFR-204ENST00000508282 CARMIL2Q6F5E8 1435 aa8.36□□□□□ -1.07
DHFR-204ENST00000508282 C9IYK1 514 aa8.35□□□□□ -1.07
DHFR-204ENST00000508282 PAX4O43316 350 aa8.35□□□□□ -1.07
DHFR-204ENST00000508282 GDNFP39905 211 aa8.35□□□□□ -1.07
DHFR-204ENST00000508282 UNC5AQ6ZN44 842 aa8.35□□□□□ -1.07
DHFR-204ENST00000508282 ENOX1Q8TC92 643 aaKnown RBP8.35□□□□□ -1.07
DHFR-204ENST00000508282 SYTL5Q8TDW5 730 aaPredicted RBP8.35□□□□□ -1.07
DHFR-204ENST00000508282 DHRS1Q96LJ7 313 aa8.35□□□□□ -1.07
DHFR-204ENST00000508282 MKRN2Q9H000 416 aaKnown RBP8.35□□□□□ -1.07
DHFR-204ENST00000508282 ASCC2Q9H1I8 757 aaPredicted RBP8.35□□□□□ -1.07
DHFR-204ENST00000508282 LTKP29376 864 aa8.34□□□□□ -1.07
DHFR-204ENST00000508282 GIPRP48546 466 aa8.34□□□□□ -1.07
DHFR-204ENST00000508282 EIF6P56537 245 aaKnown RBP8.34□□□□□ -1.07
DHFR-204ENST00000508282 ASIC4Q96FT7 647 aa8.34□□□□□ -1.07
DHFR-204ENST00000508282 SEC16BQ96JE7 1060 aa8.34□□□□□ -1.07
DHFR-204ENST00000508282 CRBNQ96SW2 442 aa8.34□□□□□ -1.07
DHFR-204ENST00000508282 SRRTQ9BXP5 876 aaKnown RBP8.34□□□□□ -1.07
DHFR-204ENST00000508282 ADAMTS10Q9H324 1103 aa8.34□□□□□ -1.07
DHFR-204ENST00000508282 PRAMEF1O95521 474 aa8.33□□□□□ -1.08
DHFR-204ENST00000508282 PMS1P54277 932 aaKnown RBP8.33□□□□□ -1.08
DHFR-204ENST00000508282 FYB2Q5VWT5 728 aa8.33□□□□□ -1.08
DHFR-204ENST00000508282 TTC6Q86TZ1 520 aa8.33□□□□□ -1.08
DHFR-204ENST00000508282 PPFIBP1Q86W92 1011 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms