RNA–Protein interactions for RNA: ENST00000508249.1

UBE2D3-223, Transcript of ubiquitin conjugating enzyme E2 D3, human

TSL 4

Gene UBE2D3, Length 604 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE2D3-223	ENST00000508249	SLF2	Q8IX21	1173 aa		11.21	□□□□□ -0.61
UBE2D3-223	ENST00000508249	KIF1BP	Q96EK5	621 aa		11.21	□□□□□ -0.61
UBE2D3-223	ENST00000508249	ZNF512B	Q96KM6	892 aa	Predicted RBP	11.21	□□□□□ -0.61
UBE2D3-223	ENST00000508249	NEUROD6	Q96NK8	337 aa		11.21	□□□□□ -0.61
UBE2D3-223	ENST00000508249	NECAB3	Q96P71	396 aa	Predicted RBP	11.21	□□□□□ -0.61
UBE2D3-223	ENST00000508249	ZNF576	Q9H609	170 aa		11.21	□□□□□ -0.61
UBE2D3-223	ENST00000508249	THEG	Q9P2T0	379 aa		11.21	□□□□□ -0.61
UBE2D3-223	ENST00000508249	PIEZO1	Q92508	2521 aa		11.2	□□□□□ -0.62
UBE2D3-223	ENST00000508249	SPDYE16	A6NNV3	312 aa	Predicted RBP	11.2	□□□□□ -0.62
UBE2D3-223	ENST00000508249	SEPT4	O43236	478 aa		11.2	□□□□□ -0.62
UBE2D3-223	ENST00000508249	ARID4A	P29374	1257 aa	Predicted RBP	11.2	□□□□□ -0.62
UBE2D3-223	ENST00000508249	CNGA1	P29973	690 aa		11.2	□□□□□ -0.62
UBE2D3-223	ENST00000508249	C20orf194	Q5TEA3	1177 aa		11.2	□□□□□ -0.62
UBE2D3-223	ENST00000508249	RASIP1	Q5U651	963 aa		11.2	□□□□□ -0.62
UBE2D3-223	ENST00000508249	OLFML2B	Q68BL8	750 aa		11.2	□□□□□ -0.62
UBE2D3-223	ENST00000508249	TMED8	Q6PL24	325 aa	Predicted RBP	11.2	□□□□□ -0.62
UBE2D3-223	ENST00000508249	ERICH6	Q7L0X2	663 aa		11.2	□□□□□ -0.62
UBE2D3-223	ENST00000508249	TEX11	Q8IYF3	940 aa		11.2	□□□□□ -0.62
UBE2D3-223	ENST00000508249	CLASRP	Q8N2M8	674 aa	Known RBP	11.2	□□□□□ -0.62
UBE2D3-223	ENST00000508249	FERMT2	Q96AC1	680 aa		11.2	□□□□□ -0.62
UBE2D3-223	ENST00000508249	UHRF1	Q96T88	793 aa	Predicted RBP	11.2	□□□□□ -0.62
UBE2D3-223	ENST00000508249	PI4KB	Q9UBF8	816 aa		11.2	□□□□□ -0.62
UBE2D3-223	ENST00000508249	KBTBD13	C9JR72	458 aa		11.19	□□□□□ -0.62
UBE2D3-223	ENST00000508249	COBL	O75128	1261 aa		11.19	□□□□□ -0.62
UBE2D3-223	ENST00000508249	VCAM1	P19320	739 aa		11.19	□□□□□ -0.62
UBE2D3-223	ENST00000508249	AKNAD1	Q5T1N1	836 aa		11.19	□□□□□ -0.62
UBE2D3-223	ENST00000508249	CATSPERG	Q6ZRH7	1159 aa		11.19	□□□□□ -0.62
UBE2D3-223	ENST00000508249	C16orf59	Q7L2K0	433 aa		11.19	□□□□□ -0.62
UBE2D3-223	ENST00000508249	TIFA	Q96CG3	184 aa		11.19	□□□□□ -0.62
UBE2D3-223	ENST00000508249	PBX4	Q9BYU1	374 aa		11.19	□□□□□ -0.62
UBE2D3-223	ENST00000508249	PHF24	Q9UPV7	400 aa		11.19	□□□□□ -0.62
UBE2D3-223	ENST00000508249	MYH8	P13535	1937 aa		11.18	□□□□□ -0.62
UBE2D3-223	ENST00000508249	GRXCR1	A8MXD5	290 aa		11.18	□□□□□ -0.62
UBE2D3-223	ENST00000508249	CLTB	P09497	229 aa		11.18	□□□□□ -0.62
UBE2D3-223	ENST00000508249	ADORA2A	P29274	412 aa		11.18	□□□□□ -0.62
UBE2D3-223	ENST00000508249	MCAM	P43121	646 aa		11.18	□□□□□ -0.62
UBE2D3-223	ENST00000508249	ATP2B2	Q01814	1243 aa		11.18	□□□□□ -0.62
UBE2D3-223	ENST00000508249	ZYX	Q15942	572 aa	Known RBP	11.18	□□□□□ -0.62
UBE2D3-223	ENST00000508249	TTC39A	Q5SRH9	613 aa		11.18	□□□□□ -0.62
UBE2D3-223	ENST00000508249	PRAMEF19	Q5SWL8	479 aa		11.18	□□□□□ -0.62
UBE2D3-223	ENST00000508249	USP17L2	Q6R6M4	530 aa		11.18	□□□□□ -0.62
UBE2D3-223	ENST00000508249	ARRDC4	Q8NCT1	418 aa		11.18	□□□□□ -0.62
UBE2D3-223	ENST00000508249	RHPN1	Q8TCX5	695 aa		11.18	□□□□□ -0.62
UBE2D3-223	ENST00000508249	ACER1	Q8TDN7	264 aa		11.18	□□□□□ -0.62
UBE2D3-223	ENST00000508249	BUD13	Q9BRD0	619 aa	Known RBP eCLIP	11.18	□□□□□ -0.62
UBE2D3-223	ENST00000508249	DHX36	Q9H2U1	1008 aa	Known RBP	11.18	□□□□□ -0.62
UBE2D3-223	ENST00000508249	PRDM12	Q9H4Q4	367 aa		11.18	□□□□□ -0.62
UBE2D3-223	ENST00000508249	GINM1	Q9NU53	330 aa		11.18	□□□□□ -0.62
UBE2D3-223	ENST00000508249	PALD1	Q9ULE6	856 aa		11.18	□□□□□ -0.62
UBE2D3-223	ENST00000508249	EXOC6B	Q9Y2D4	811 aa		11.18	□□□□□ -0.62
UBE2D3-223	ENST00000508249	MUC6	Q6W4X9	2439 aa		11.18	□□□□□ -0.62
UBE2D3-223	ENST00000508249	COL4A4	P53420	1690 aa	Predicted RBP	11.17	□□□□□ -0.62
UBE2D3-223	ENST00000508249	HSFX4	A0A1B0GTS1	333 aa	Predicted RBP	11.17	□□□□□ -0.62
UBE2D3-223	ENST00000508249	HSFX3	A0A1B0GWH4	333 aa	Predicted RBP	11.17	□□□□□ -0.62
UBE2D3-223	ENST00000508249	USP17L15	C9J2P7	530 aa		11.17	□□□□□ -0.62
UBE2D3-223	ENST00000508249	USP17L13	C9JLJ4	530 aa		11.17	□□□□□ -0.62
UBE2D3-223	ENST00000508249	USP17L11	C9JVI0	530 aa		11.17	□□□□□ -0.62
UBE2D3-223	ENST00000508249	USP17L18	D6R9N7	530 aa		11.17	□□□□□ -0.62
UBE2D3-223	ENST00000508249	USP17L22	D6RA61	530 aa		11.17	□□□□□ -0.62
UBE2D3-223	ENST00000508249	USP17L17	D6RBQ6	530 aa		11.17	□□□□□ -0.62
UBE2D3-223	ENST00000508249	USP17L19	D6RCP7	530 aa		11.17	□□□□□ -0.62
UBE2D3-223	ENST00000508249	USP17L20	D6RJB6	530 aa		11.17	□□□□□ -0.62
UBE2D3-223	ENST00000508249	GH2	P01242	217 aa		11.17	□□□□□ -0.62
UBE2D3-223	ENST00000508249	GSTO1	P78417	241 aa		11.17	□□□□□ -0.62
UBE2D3-223	ENST00000508249	FPGS	Q05932	587 aa		11.17	□□□□□ -0.62
UBE2D3-223	ENST00000508249	FAAP100	Q0VG06	881 aa		11.17	□□□□□ -0.62
UBE2D3-223	ENST00000508249	USP17L24	Q0WX57	530 aa		11.17	□□□□□ -0.62
UBE2D3-223	ENST00000508249	MAPKAPK5	Q8IW41	473 aa		11.17	□□□□□ -0.62
UBE2D3-223	ENST00000508249	SPATA5	Q8NB90	893 aa		11.17	□□□□□ -0.62
UBE2D3-223	ENST00000508249	TGFBRAP1	Q8WUH2	860 aa		11.17	□□□□□ -0.62
UBE2D3-223	ENST00000508249	PPM1E	Q8WY54	764 aa		11.17	□□□□□ -0.62
UBE2D3-223	ENST00000508249	MOV10L1	Q9BXT6	1211 aa	Known RBP	11.17	□□□□□ -0.62
UBE2D3-223	ENST00000508249	KIAA1683	Q9H0B3	1180 aa		11.17	□□□□□ -0.62
UBE2D3-223	ENST00000508249	AATF	Q9NY61	560 aa	Known RBP eCLIP	11.17	□□□□□ -0.62	6e-12	■■□□□ 12.2
UBE2D3-223	ENST00000508249	TBX21	Q9UL17	535 aa		11.17	□□□□□ -0.62
UBE2D3-223	ENST00000508249	MCM3AP	O60318	1980 aa		11.17	□□□□□ -0.62
UBE2D3-223	ENST00000508249	USP34	Q70CQ2	3546 aa		11.17	□□□□□ -0.62
UBE2D3-223	ENST00000508249		A0A1W2PQ45	241 aa	Predicted RBP	11.16	□□□□□ -0.62
UBE2D3-223	ENST00000508249		A0A1W2PQY0	241 aa		11.16	□□□□□ -0.62
UBE2D3-223	ENST00000508249	LDHC	P07864	332 aa		11.16	□□□□□ -0.62
UBE2D3-223	ENST00000508249	BMP1	P13497	986 aa		11.16	□□□□□ -0.62
UBE2D3-223	ENST00000508249	GUCY1A2	P33402	732 aa		11.16	□□□□□ -0.62
UBE2D3-223	ENST00000508249	PPP4C	P60510	307 aa		11.16	□□□□□ -0.62
UBE2D3-223	ENST00000508249	CCNA1	P78396	465 aa		11.16	□□□□□ -0.62
UBE2D3-223	ENST00000508249	MRPS5	P82675	430 aa	Known RBP	11.16	□□□□□ -0.62
UBE2D3-223	ENST00000508249	WDR78	Q5VTH9	848 aa		11.16	□□□□□ -0.62
UBE2D3-223	ENST00000508249	TATDN1	Q6P1N9	297 aa		11.16	□□□□□ -0.62
UBE2D3-223	ENST00000508249	ANKRD33	Q7Z3H0	272 aa		11.16	□□□□□ -0.62
UBE2D3-223	ENST00000508249	CCAR1	Q8IX12	1150 aa	Known RBP	11.16	□□□□□ -0.62
UBE2D3-223	ENST00000508249	SIRT2	Q8IXJ6	389 aa		11.16	□□□□□ -0.62
UBE2D3-223	ENST00000508249	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	11.16	□□□□□ -0.62
UBE2D3-223	ENST00000508249	LENG1	Q96BZ8	264 aa	Predicted RBP	11.16	□□□□□ -0.62
UBE2D3-223	ENST00000508249	DBNDD2	Q9BQY9	259 aa		11.16	□□□□□ -0.62
UBE2D3-223	ENST00000508249	C11orf16	Q9NQ32	467 aa		11.16	□□□□□ -0.62
UBE2D3-223	ENST00000508249	DBNL	Q9UJU6	430 aa	Known RBP	11.16	□□□□□ -0.62
UBE2D3-223	ENST00000508249	ARIH1	Q9Y4X5	557 aa	Predicted RBP	11.16	□□□□□ -0.62
UBE2D3-223	ENST00000508249	TACC3	Q9Y6A5	838 aa		11.16	□□□□□ -0.62
UBE2D3-223	ENST00000508249	PQBP1	O60828	265 aa	Known RBP	11.15	□□□□□ -0.62
UBE2D3-223	ENST00000508249	ADAMTS4	O75173	837 aa		11.15	□□□□□ -0.62
UBE2D3-223	ENST00000508249	GLRX3	O76003	335 aa	Known RBP	11.15	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms