RNA–Protein interactions for RNA: ENST00000507046.5

DDR1-259, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-259ENST00000507046 STAG1Q8WVM7 1258 aa23.53■■□□□ 1.36
DDR1-259ENST00000507046 RPAP3Q9H6T3 665 aaPredicted RBP23.53■■□□□ 1.36
DDR1-259ENST00000507046 TRIM17Q9Y577 477 aa23.53■■□□□ 1.36
DDR1-259ENST00000507046 PKN2Q16513 984 aaKnown RBP23.52■■□□□ 1.36
DDR1-259ENST00000507046 CASC1Q6TDU7 716 aa23.52■■□□□ 1.36
DDR1-259ENST00000507046 TBC1D10CQ8IV04 446 aa23.52■■□□□ 1.36
DDR1-259ENST00000507046 CEP95Q96GE4 821 aa23.52■■□□□ 1.36
DDR1-259ENST00000507046 MCOLN1Q9GZU1 580 aa23.52■■□□□ 1.36
DDR1-259ENST00000507046 EFCC1Q9HA90 598 aa23.52■■□□□ 1.36
DDR1-259ENST00000507046 MTMR4Q9NYA4 1195 aa23.52■■□□□ 1.36
DDR1-259ENST00000507046 RAD21O60216 631 aa23.51■■□□□ 1.35
DDR1-259ENST00000507046 TTLL1O95922 423 aa23.51■■□□□ 1.35
DDR1-259ENST00000507046 HERVK_113P62684 666 aa23.51■■□□□ 1.35
DDR1-259ENST00000507046 FAM110CQ1W6H9 321 aa23.51■■□□□ 1.35
DDR1-259ENST00000507046 CATSPERGQ6ZRH7 1159 aa23.51■■□□□ 1.35
DDR1-259ENST00000507046 ANKRD13CQ8N6S4 541 aa23.51■■□□□ 1.35
DDR1-259ENST00000507046 TANGO6Q9C0B7 1094 aa23.51■■□□□ 1.35
DDR1-259ENST00000507046 INCENPQ9NQS7 918 aa23.51■■□□□ 1.35
DDR1-259ENST00000507046 WDR46O15213 610 aaKnown RBP23.5■■□□□ 1.35
DDR1-259ENST00000507046 NT5C2P49902 561 aa23.5■■□□□ 1.35
DDR1-259ENST00000507046 KIAA1211Q6ZU35 1233 aa23.5■■□□□ 1.35
DDR1-259ENST00000507046 OTOP1Q7RTM1 612 aa23.5■■□□□ 1.35
DDR1-259ENST00000507046 SPICE1Q8N0Z3 855 aa23.5■■□□□ 1.35
DDR1-259ENST00000507046 P2RX7Q99572 595 aaKnown RBP23.5■■□□□ 1.35
DDR1-259ENST00000507046 NBPF3Q9H094 633 aa23.5■■□□□ 1.35
DDR1-259ENST00000507046 CLIP2Q9UDT6 1046 aa23.5■■□□□ 1.35
DDR1-259ENST00000507046 SYNPO2Q9UMS6 1093 aa23.5■■□□□ 1.35
DDR1-259ENST00000507046 TACC3Q9Y6A5 838 aa23.5■■□□□ 1.35
DDR1-259ENST00000507046 CDC45O75419 566 aa23.49■■□□□ 1.35
DDR1-259ENST00000507046 ESYT1Q9BSJ8 1104 aa23.49■■□□□ 1.35
DDR1-259ENST00000507046 U3KPZ7 1027 aaPredicted RBP23.49■■□□□ 1.35
DDR1-259ENST00000507046 MYH4Q9Y623 1939 aa23.49■■□□□ 1.35
DDR1-259ENST00000507046 GNRH1P01148 92 aa23.48■■□□□ 1.35
DDR1-259ENST00000507046 FCGRTP55899 365 aa23.48■■□□□ 1.35
DDR1-259ENST00000507046 PTH1RQ03431 593 aa23.48■■□□□ 1.35
DDR1-259ENST00000507046 KIAA1755Q5JYT7 1200 aa23.48■■□□□ 1.35
DDR1-259ENST00000507046 ESR2Q92731 530 aa23.48■■□□□ 1.35
DDR1-259ENST00000507046 NEDD4P46934 1319 aa23.48■■□□□ 1.35
DDR1-259ENST00000507046 PSMC4P43686 418 aa23.47■■□□□ 1.35
DDR1-259ENST00000507046 FBXO46Q6PJ61 603 aaPredicted RBP23.47■■□□□ 1.35
DDR1-259ENST00000507046 MKL1Q969V6 931 aa23.47■■□□□ 1.35
DDR1-259ENST00000507046 ARHGAP39Q9C0H5 1083 aa23.47■■□□□ 1.35
DDR1-259ENST00000507046 MORF4L1Q9UBU8 362 aa23.47■■□□□ 1.35
DDR1-259ENST00000507046 STX8Q9UNK0 236 aa23.47■■□□□ 1.35
DDR1-259ENST00000507046 ZSWIM8A7E2V4 1837 aa23.46■■□□□ 1.35
DDR1-259ENST00000507046 ECM2O94769 699 aaPredicted RBP23.46■■□□□ 1.35
DDR1-259ENST00000507046 FMNL1O95466 1100 aaPredicted RBP23.46■■□□□ 1.35
DDR1-259ENST00000507046 LRRC47Q8N1G4 583 aaKnown RBP23.46■■□□□ 1.35
DDR1-259ENST00000507046 PAGR1Q9BTK6 254 aa23.46■■□□□ 1.35
DDR1-259ENST00000507046 CNNM2Q9H8M5 875 aa23.46■■□□□ 1.35
DDR1-259ENST00000507046 F5H6K3 240 aa23.45■■□□□ 1.34
DDR1-259ENST00000507046 FLOT1O75955 427 aa23.45■■□□□ 1.34
DDR1-259ENST00000507046 HOXD10P28358 340 aa23.45■■□□□ 1.34
DDR1-259ENST00000507046 CAP1Q01518 475 aa23.45■■□□□ 1.34
DDR1-259ENST00000507046 KLRC3Q07444 240 aa23.45■■□□□ 1.34
DDR1-259ENST00000507046 COG2Q14746 738 aa23.45■■□□□ 1.34
DDR1-259ENST00000507046 LBX2Q6XYB7 198 aa23.45■■□□□ 1.34
DDR1-259ENST00000507046 GMCL1P1Q8NEA9 526 aa23.45■■□□□ 1.34
DDR1-259ENST00000507046 GPRC5AQ8NFJ5 357 aa23.45■■□□□ 1.34
DDR1-259ENST00000507046 TRIM47Q96LD4 638 aa23.45■■□□□ 1.34
DDR1-259ENST00000507046 KRT23Q9C075 422 aa23.45■■□□□ 1.34
DDR1-259ENST00000507046 IL17RBQ9NRM6 502 aa23.45■■□□□ 1.34
DDR1-259ENST00000507046 TCP11L1Q9NUJ3 509 aa23.45■■□□□ 1.34
DDR1-259ENST00000507046 HOXC10Q9NYD6 342 aa23.45■■□□□ 1.34
DDR1-259ENST00000507046 MYPNQ86TC9 1320 aa23.44■■□□□ 1.34
DDR1-259ENST00000507046 SPDYE16A6NNV3 312 aaPredicted RBP23.44■■□□□ 1.34
DDR1-259ENST00000507046 NMT2O60551 498 aa23.44■■□□□ 1.34
DDR1-259ENST00000507046 NDUFB10O96000 172 aa23.44■■□□□ 1.34
DDR1-259ENST00000507046 FAM83BQ5T0W9 1011 aa23.44■■□□□ 1.34
DDR1-259ENST00000507046 MAP4K1Q92918 833 aa23.44■■□□□ 1.34
DDR1-259ENST00000507046 ANO2Q9NQ90 1003 aa23.44■■□□□ 1.34
DDR1-259ENST00000507046 PTPN22Q9Y2R2 807 aa23.44■■□□□ 1.34
DDR1-259ENST00000507046 RABGAP1Q9Y3P9 1069 aa23.44■■□□□ 1.34
DDR1-259ENST00000507046 MGAMO43451 1857 aa23.43■■□□□ 1.34
DDR1-259ENST00000507046 TNPO2O14787 897 aaKnown RBP23.43■■□□□ 1.34
DDR1-259ENST00000507046 CTGFP29279 349 aa23.43■■□□□ 1.34
DDR1-259ENST00000507046 PRMT2P55345 433 aa23.43■■□□□ 1.34
DDR1-259ENST00000507046 ERVK-9P63128 1117 aa23.43■■□□□ 1.34
DDR1-259ENST00000507046 ERVK-24P63145 666 aa23.43■■□□□ 1.34
DDR1-259ENST00000507046 ABHD8Q96I13 439 aa23.43■■□□□ 1.34
DDR1-259ENST00000507046 TXNRD2Q9NNW7 524 aa23.43■■□□□ 1.34
DDR1-259ENST00000507046 RBPJLQ9UBG7 517 aa23.43■■□□□ 1.34
DDR1-259ENST00000507046 RBM8AQ9Y5S9 174 aaKnown RBP23.43■■□□□ 1.34
DDR1-259ENST00000507046 B4E1Z4 1266 aa23.42■■□□□ 1.34
DDR1-259ENST00000507046 KDM4AO75164 1064 aa23.42■■□□□ 1.34
DDR1-259ENST00000507046 CYP21A2P08686 494 aa23.42■■□□□ 1.34
DDR1-259ENST00000507046 TRDNQ13061 729 aa23.42■■□□□ 1.34
DDR1-259ENST00000507046 CCDC178Q5BJE1 867 aa23.42■■□□□ 1.34
DDR1-259ENST00000507046 IQCA1Q86XH1 822 aa23.42■■□□□ 1.34
DDR1-259ENST00000507046 CCAR1Q8IX12 1150 aaKnown RBP23.42■■□□□ 1.34
DDR1-259ENST00000507046 MB21D1Q8N884 522 aa23.42■■□□□ 1.34
DDR1-259ENST00000507046 LSG1Q9H089 658 aaKnown RBP23.42■■□□□ 1.34
DDR1-259ENST00000507046 DSG3P32926 999 aa23.41■■□□□ 1.34
DDR1-259ENST00000507046 NOVP48745 357 aa23.41■■□□□ 1.34
DDR1-259ENST00000507046 CCNA1P78396 465 aa23.41■■□□□ 1.34
DDR1-259ENST00000507046 SLFN13Q68D06 897 aa23.41■■□□□ 1.34
DDR1-259ENST00000507046 SAMD1Q6SPF0 538 aaPredicted RBP23.41■■□□□ 1.34
DDR1-259ENST00000507046 COA7Q96BR5 231 aa23.41■■□□□ 1.34
DDR1-259ENST00000507046 NUP88Q99567 741 aaPredicted RBP23.41■■□□□ 1.34
DDR1-259ENST00000507046 SRRDQ9UH36 339 aa23.41■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms