RNA–Protein interactions for RNA: ENST00000506687.5

CPNE4-207, Transcript of copine 4, humanhuman

TSL 3

Gene CPNE4, Length 447 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-207ENST00000506687 UNC93B1Q9H1C4 597 aa6.07□□□□□ -1.44
CPNE4-207ENST00000506687 GBA2Q9HCG7 927 aaPredicted RBP6.07□□□□□ -1.44
CPNE4-207ENST00000506687 GPRC5DQ9NZD1 345 aa6.07□□□□□ -1.44
CPNE4-207ENST00000506687 SERTAD1Q9UHV2 236 aa6.07□□□□□ -1.44
CPNE4-207ENST00000506687 RAPGEFL1Q9UHV5 662 aa6.07□□□□□ -1.44
CPNE4-207ENST00000506687 TAF1P21675 1872 aa6.07□□□□□ -1.44
CPNE4-207ENST00000506687 RTL9Q8NET4 1388 aa6.06□□□□□ -1.44
CPNE4-207ENST00000506687 DICER1Q9UPY3 1922 aaKnown RBP6.06□□□□□ -1.44
CPNE4-207ENST00000506687 EIF1AYO14602 144 aaKnown RBP6.06□□□□□ -1.44
CPNE4-207ENST00000506687 BACH1O14867 736 aa6.06□□□□□ -1.44
CPNE4-207ENST00000506687 PLIN1O60240 522 aa6.06□□□□□ -1.44
CPNE4-207ENST00000506687 NR1I2O75469 434 aa6.06□□□□□ -1.44
CPNE4-207ENST00000506687 ORC1Q13415 861 aa6.06□□□□□ -1.44
CPNE4-207ENST00000506687 PDE3AQ14432 1141 aa6.06□□□□□ -1.44
CPNE4-207ENST00000506687 RABL6Q3YEC7 729 aaPredicted RBP6.06□□□□□ -1.44
CPNE4-207ENST00000506687 FAM26DQ5JW98 314 aa6.06□□□□□ -1.44
CPNE4-207ENST00000506687 TBCELQ5QJ74 424 aa6.06□□□□□ -1.44
CPNE4-207ENST00000506687 C20orf194Q5TEA3 1177 aa6.06□□□□□ -1.44
CPNE4-207ENST00000506687 SH3RF1Q7Z6J0 888 aa6.06□□□□□ -1.44
CPNE4-207ENST00000506687 DZIP1LQ8IYY4 767 aaKnown RBP6.06□□□□□ -1.44
CPNE4-207ENST00000506687 ANKRD44Q8N8A2 993 aa6.06□□□□□ -1.44
CPNE4-207ENST00000506687 STAG1Q8WVM7 1258 aa6.06□□□□□ -1.44
CPNE4-207ENST00000506687 EDEM1Q92611 657 aa6.06□□□□□ -1.44
CPNE4-207ENST00000506687 MKL1Q969V6 931 aa6.06□□□□□ -1.44
CPNE4-207ENST00000506687 SUCLG2Q96I99 432 aa6.06□□□□□ -1.44
CPNE4-207ENST00000506687 SLKQ9H2G2 1235 aaPredicted RBP6.06□□□□□ -1.44
CPNE4-207ENST00000506687 LRFN2Q9ULH4 789 aa6.06□□□□□ -1.44
CPNE4-207ENST00000506687 COL4A1P02462 1669 aa6.06□□□□□ -1.44
CPNE4-207ENST00000506687 FER1L6Q2WGJ9 1857 aa6.06□□□□□ -1.44
CPNE4-207ENST00000506687 SNED1Q8TER0 1413 aa6.06□□□□□ -1.44
CPNE4-207ENST00000506687 UNC80Q8N2C7 3258 aa6.05□□□□□ -1.44
CPNE4-207ENST00000506687 MYH3P11055 1940 aa6.05□□□□□ -1.44
CPNE4-207ENST00000506687 SYNGAP1Q96PV0 1343 aa6.05□□□□□ -1.44
CPNE4-207ENST00000506687 OPLAHO14841 1288 aa6.05□□□□□ -1.44
CPNE4-207ENST00000506687 NPHP1O15259 732 aa6.05□□□□□ -1.44
CPNE4-207ENST00000506687 BBOX1O75936 387 aa6.05□□□□□ -1.44
CPNE4-207ENST00000506687 ALDH1B1P30837 517 aa6.05□□□□□ -1.44
CPNE4-207ENST00000506687 USP5P45974 858 aa6.05□□□□□ -1.44
CPNE4-207ENST00000506687 SCTRP47872 440 aa6.05□□□□□ -1.44
CPNE4-207ENST00000506687 GDF10P55107 478 aa6.05□□□□□ -1.44
CPNE4-207ENST00000506687 CTSWP56202 376 aa6.05□□□□□ -1.44
CPNE4-207ENST00000506687 AMPD3Q01432 767 aa6.05□□□□□ -1.44
CPNE4-207ENST00000506687 PLEKHG4Q58EX7 1191 aa6.05□□□□□ -1.44
CPNE4-207ENST00000506687 TAF7LQ5H9L4 462 aa6.05□□□□□ -1.44
CPNE4-207ENST00000506687 MEI1Q5TIA1 1274 aa6.05□□□□□ -1.44
CPNE4-207ENST00000506687 PTCRAQ6ISU1 281 aaPredicted RBP6.05□□□□□ -1.44
CPNE4-207ENST00000506687 SLC51AQ86UW1 340 aa6.05□□□□□ -1.44
CPNE4-207ENST00000506687 FMNL3Q8IVF7 1028 aa6.05□□□□□ -1.44
CPNE4-207ENST00000506687 PANK1Q8TE04 598 aa6.05□□□□□ -1.44
CPNE4-207ENST00000506687 DPF3Q92784 378 aa6.05□□□□□ -1.44
CPNE4-207ENST00000506687 PMM1Q92871 262 aa6.05□□□□□ -1.44
CPNE4-207ENST00000506687 CELF1Q92879 486 aaKnown RBP6.05□□□□□ -1.44
CPNE4-207ENST00000506687 RBM17Q96I25 401 aaKnown RBP6.05□□□□□ -1.44
CPNE4-207ENST00000506687 MEIS3Q99687 375 aa6.05□□□□□ -1.44
CPNE4-207ENST00000506687 TRIM55Q9BYV6 548 aa6.05□□□□□ -1.44
CPNE4-207ENST00000506687 GREM2Q9H772 168 aa6.05□□□□□ -1.44
CPNE4-207ENST00000506687 SEC31BQ9NQW1 1179 aa6.05□□□□□ -1.44
CPNE4-207ENST00000506687 MTMR10Q9NXD2 777 aa6.05□□□□□ -1.44
CPNE4-207ENST00000506687 C9orf78Q9NZ63 289 aaPredicted RBP6.05□□□□□ -1.44
CPNE4-207ENST00000506687 SIRPGQ9P1W8 387 aa6.05□□□□□ -1.44
CPNE4-207ENST00000506687 PRKAB1Q9Y478 270 aa6.05□□□□□ -1.44
CPNE4-207ENST00000506687 TRIM17Q9Y577 477 aa6.05□□□□□ -1.44
CPNE4-207ENST00000506687 RFX5P48382 616 aaPredicted RBP6.04□□□□□ -1.44
CPNE4-207ENST00000506687 RPS8P62241 208 aaKnown RBP6.04□□□□□ -1.44
CPNE4-207ENST00000506687 IRX6P78412 446 aaPredicted RBP6.04□□□□□ -1.44
CPNE4-207ENST00000506687 NFX1Q12986 1120 aaKnown RBP6.04□□□□□ -1.44
CPNE4-207ENST00000506687 MTX1Q13505 466 aa6.04□□□□□ -1.44
CPNE4-207ENST00000506687 GRAPQ13588 217 aa6.04□□□□□ -1.44
CPNE4-207ENST00000506687 MVPQ14764 893 aaKnown RBP6.04□□□□□ -1.44
CPNE4-207ENST00000506687 TAF1CQ15572 869 aaPredicted RBP6.04□□□□□ -1.44
CPNE4-207ENST00000506687 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.04□□□□□ -1.44
CPNE4-207ENST00000506687 CCDC152Q4G0S7 254 aa6.04□□□□□ -1.44
CPNE4-207ENST00000506687 MSS51Q4VC12 460 aa6.04□□□□□ -1.44
CPNE4-207ENST00000506687 LMBR1LQ6UX01 489 aa6.04□□□□□ -1.44
CPNE4-207ENST00000506687 ANKS3Q6ZW76 656 aa6.04□□□□□ -1.44
CPNE4-207ENST00000506687 DDX46Q7L014 1031 aaKnown RBP6.04□□□□□ -1.44
CPNE4-207ENST00000506687 OTOP1Q7RTM1 612 aa6.04□□□□□ -1.44
CPNE4-207ENST00000506687 BPHLQ86WA6 291 aaPredicted RBP6.04□□□□□ -1.44
CPNE4-207ENST00000506687 SP8Q8IXZ3 490 aa6.04□□□□□ -1.44
CPNE4-207ENST00000506687 FAM160A2Q8N612 972 aaPredicted RBP6.04□□□□□ -1.44
CPNE4-207ENST00000506687 GRAPLQ8TC17 118 aaPredicted RBP6.04□□□□□ -1.44
CPNE4-207ENST00000506687 RPGRQ92834 1020 aaKnown RBP6.04□□□□□ -1.44
CPNE4-207ENST00000506687 FOXJ1Q92949 421 aa6.04□□□□□ -1.44
CPNE4-207ENST00000506687 ZFRQ96KR1 1074 aaKnown RBP6.04□□□□□ -1.44
CPNE4-207ENST00000506687 BICC1Q9H694 974 aaKnown RBP6.04□□□□□ -1.44
CPNE4-207ENST00000506687 COPRSQ9NQ92 184 aa6.04□□□□□ -1.44
CPNE4-207ENST00000506687 PRDM9Q9NQV7 894 aa6.04□□□□□ -1.44
CPNE4-207ENST00000506687 BCCIPQ9P287 314 aaKnown RBP eCLIP6.04□□□□□ -1.44
CPNE4-207ENST00000506687 ATP6V0A2Q9Y487 856 aa6.04□□□□□ -1.44
CPNE4-207ENST00000506687 MRVI1Q9Y6F6 885 aa6.04□□□□□ -1.44
CPNE4-207ENST00000506687 CDC45O75419 566 aa6.03□□□□□ -1.44
CPNE4-207ENST00000506687 PDGFAP04085 211 aa6.03□□□□□ -1.44
CPNE4-207ENST00000506687 GNAI3P08754 354 aa6.03□□□□□ -1.44
CPNE4-207ENST00000506687 PDGFRBP09619 1106 aa6.03□□□□□ -1.44
CPNE4-207ENST00000506687 ITGA6P23229 1130 aa6.03□□□□□ -1.44
CPNE4-207ENST00000506687 ETFBP38117 255 aa6.03□□□□□ -1.44
CPNE4-207ENST00000506687 MMP16P51512 607 aa6.03□□□□□ -1.44
CPNE4-207ENST00000506687 EPHA4P54764 986 aa6.03□□□□□ -1.44
CPNE4-207ENST00000506687 RRP1P56182 461 aaKnown RBP6.03□□□□□ -1.44
CPNE4-207ENST00000506687 OLFM4Q6UX06 510 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms