RNA–Protein interactions for RNA: ENST00000506630.1

TCOF1-209, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 897 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-209ENST00000506630 PEX10O60683 326 aa15.64■□□□□ 0.09
TCOF1-209ENST00000506630 GSPT1P15170 499 aaKnown RBP15.64■□□□□ 0.09
TCOF1-209ENST00000506630 BACE1P56817 501 aa15.64■□□□□ 0.09
TCOF1-209ENST00000506630 LRCH3Q96II8 777 aa15.64■□□□□ 0.09
TCOF1-209ENST00000506630 CCDC136Q96JN2 1154 aa15.64■□□□□ 0.09
TCOF1-209ENST00000506630 FEZ1Q99689 392 aa15.64■□□□□ 0.09
TCOF1-209ENST00000506630 WDR18Q9BV38 432 aa15.64■□□□□ 0.09
TCOF1-209ENST00000506630 USP17L10C9JJH3 530 aa15.63■□□□□ 0.09
TCOF1-209ENST00000506630 HIP1O00291 1037 aa15.63■□□□□ 0.09
TCOF1-209ENST00000506630 AKR1B1P15121 316 aa15.63■□□□□ 0.09
TCOF1-209ENST00000506630 SEPT2Q15019 361 aa15.63■□□□□ 0.09
TCOF1-209ENST00000506630 ZYXQ15942 572 aaKnown RBP15.63■□□□□ 0.09
TCOF1-209ENST00000506630 VPS53Q5VIR6 699 aa15.63■□□□□ 0.09
TCOF1-209ENST00000506630 ZNF589Q86UQ0 364 aaPredicted RBP15.63■□□□□ 0.09
TCOF1-209ENST00000506630 ANKRD13CQ8N6S4 541 aa15.63■□□□□ 0.09
TCOF1-209ENST00000506630 PROCA1Q8NCQ7 364 aaPredicted RBP15.63■□□□□ 0.09
TCOF1-209ENST00000506630 CRISPLD2Q9H0B8 497 aa15.63■□□□□ 0.09
TCOF1-209ENST00000506630 TMOD4Q9NZQ9 345 aa15.63■□□□□ 0.09
TCOF1-209ENST00000506630 PNMA3Q9UL41 463 aa15.63■□□□□ 0.09
TCOF1-209ENST00000506630 AGTPBP1Q9UPW5 1226 aa15.63■□□□□ 0.09
TCOF1-209ENST00000506630 CCDC171Q6TFL3 1326 aa15.63■□□□□ 0.09
TCOF1-209ENST00000506630 SZT2Q5T011 3432 aa15.62■□□□□ 0.09
TCOF1-209ENST00000506630 PARP14Q460N5 1801 aa15.62■□□□□ 0.09
TCOF1-209ENST00000506630 DOCK3Q8IZD9 2030 aa15.62■□□□□ 0.09
TCOF1-209ENST00000506630 C19orf81C9J6K1 198 aa15.62■□□□□ 0.09
TCOF1-209ENST00000506630 GUCY1A2P33402 732 aa15.62■□□□□ 0.09
TCOF1-209ENST00000506630 SH3D19Q5HYK7 790 aa15.62■□□□□ 0.09
TCOF1-209ENST00000506630 CWC27Q6UX04 472 aaKnown RBP15.62■□□□□ 0.09
TCOF1-209ENST00000506630 TMEM179Q6ZVK1 233 aa15.62■□□□□ 0.09
TCOF1-209ENST00000506630 ANKLE1Q8NAG6 615 aa15.62■□□□□ 0.09
TCOF1-209ENST00000506630 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.62■□□□□ 0.09
TCOF1-209ENST00000506630 MKNK2Q9HBH9 465 aa15.62■□□□□ 0.09
TCOF1-209ENST00000506630 BMP8BP34820 402 aa15.61■□□□□ 0.09
TCOF1-209ENST00000506630 MFAP1P55081 439 aaKnown RBP15.61■□□□□ 0.09
TCOF1-209ENST00000506630 PPARAQ07869 468 aa15.61■□□□□ 0.09
TCOF1-209ENST00000506630 FAM110CQ1W6H9 321 aa15.61■□□□□ 0.09
TCOF1-209ENST00000506630 CCDC17Q96LX7 622 aa15.61■□□□□ 0.09
TCOF1-209ENST00000506630 FOXP2O15409 715 aa15.6■□□□□ 0.09
TCOF1-209ENST00000506630 SLC3A2P08195 630 aaKnown RBP15.6■□□□□ 0.09
TCOF1-209ENST00000506630 MNX1P50219 401 aaPredicted RBP15.6■□□□□ 0.09
TCOF1-209ENST00000506630 ICA1Q05084 483 aa15.6■□□□□ 0.09
TCOF1-209ENST00000506630 PABPC4Q13310 644 aaKnown RBP eCLIP15.6■□□□□ 0.09
TCOF1-209ENST00000506630 GPR153Q6NV75 609 aa15.6■□□□□ 0.09
TCOF1-209ENST00000506630 USP17L2Q6R6M4 530 aa15.6■□□□□ 0.09
TCOF1-209ENST00000506630 CLEC10AQ8IUN9 316 aa15.6■□□□□ 0.09
TCOF1-209ENST00000506630 C7orf61Q8IZ16 206 aa15.6■□□□□ 0.09
TCOF1-209ENST00000506630 ACER1Q8TDN7 264 aa15.6■□□□□ 0.09
TCOF1-209ENST00000506630 GDF15Q99988 308 aa15.6■□□□□ 0.09
TCOF1-209ENST00000506630 NBPF3Q9H094 633 aa15.6■□□□□ 0.09
TCOF1-209ENST00000506630 ZNF287Q9HBT7 754 aa15.6■□□□□ 0.09
TCOF1-209ENST00000506630 HMX1Q9NP08 348 aaPredicted RBP15.6■□□□□ 0.09
TCOF1-209ENST00000506630 RANBP2P49792 3224 aaKnown RBP15.59■□□□□ 0.09
TCOF1-209ENST00000506630 PRDM1O75626 825 aa15.59■□□□□ 0.09
TCOF1-209ENST00000506630 HMGCRP04035 888 aa15.59■□□□□ 0.09
TCOF1-209ENST00000506630 HSPD1P10809 573 aaKnown RBP15.59■□□□□ 0.09
TCOF1-209ENST00000506630 RASA1P20936 1047 aa15.59■□□□□ 0.09
TCOF1-209ENST00000506630 GCLCP48506 637 aaPredicted RBP15.59■□□□□ 0.09
TCOF1-209ENST00000506630 USP14P54578 494 aa15.59■□□□□ 0.09
TCOF1-209ENST00000506630 PDE4BQ07343 736 aa15.59■□□□□ 0.09
TCOF1-209ENST00000506630 POTEEQ6S8J3 1075 aa15.59■□□□□ 0.09
TCOF1-209ENST00000506630 SKAP1Q86WV1 359 aa15.59■□□□□ 0.09
TCOF1-209ENST00000506630 DIS3LQ8TF46 1054 aaKnown RBP15.59■□□□□ 0.09
TCOF1-209ENST00000506630 ARHGEF10LQ9HCE6 1279 aa15.59■□□□□ 0.09
TCOF1-209ENST00000506630 EMILIN3Q9NT22 766 aa15.59■□□□□ 0.09
TCOF1-209ENST00000506630 COL11A1P12107 1806 aaPredicted RBP15.59■□□□□ 0.09
TCOF1-209ENST00000506630 IRX3P78415 501 aaPredicted RBP15.58■□□□□ 0.08
TCOF1-209ENST00000506630 ATP2B2Q01814 1243 aa15.58■□□□□ 0.08
TCOF1-209ENST00000506630 ZNF444Q8N0Y2 327 aaPredicted RBP15.58■□□□□ 0.08
TCOF1-209ENST00000506630 DEFB123Q8N688 67 aa15.58■□□□□ 0.08
TCOF1-209ENST00000506630 ZMYND8Q9ULU4 1186 aaPredicted RBP15.58■□□□□ 0.08
TCOF1-209ENST00000506630 RPTORQ8N122 1335 aa15.58■□□□□ 0.08
TCOF1-209ENST00000506630 RLFQ13129 1914 aa15.58■□□□□ 0.08
TCOF1-209ENST00000506630 CTDSPL2Q05D32 466 aa15.57■□□□□ 0.08
TCOF1-209ENST00000506630 ALX1Q15699 326 aa15.57■□□□□ 0.08
TCOF1-209ENST00000506630 C12orf42Q96LP6 360 aa15.57■□□□□ 0.08
TCOF1-209ENST00000506630 KIAA1683Q9H0B3 1180 aa15.57■□□□□ 0.08
TCOF1-209ENST00000506630 ZMYM6O95789 1325 aa15.57■□□□□ 0.08
TCOF1-209ENST00000506630 A0A1W2PRG0 241 aa15.56■□□□□ 0.08
TCOF1-209ENST00000506630 FGAP02671 866 aa15.56■□□□□ 0.08
TCOF1-209ENST00000506630 VCAM1P19320 739 aa15.56■□□□□ 0.08
TCOF1-209ENST00000506630 LRIT3Q3SXY7 679 aa15.56■□□□□ 0.08
TCOF1-209ENST00000506630 ASCC2Q9H1I8 757 aaPredicted RBP15.56■□□□□ 0.08
TCOF1-209ENST00000506630 C11orf49Q9H6J7 331 aa15.56■□□□□ 0.08
TCOF1-209ENST00000506630 SH2D4AQ9H788 454 aa15.56■□□□□ 0.08
TCOF1-209ENST00000506630 KANSL2Q9H9L4 492 aa15.56■□□□□ 0.08
TCOF1-209ENST00000506630 RAD50Q92878 1312 aa15.56■□□□□ 0.08
TCOF1-209ENST00000506630 PLXNB2O15031 1838 aa15.56■□□□□ 0.08
TCOF1-209ENST00000506630 TSPY3P0CV98 308 aa15.55■□□□□ 0.08
TCOF1-209ENST00000506630 TSPY8P0CW00 308 aa15.55■□□□□ 0.08
TCOF1-209ENST00000506630 EEF2P13639 858 aaKnown RBP15.55■□□□□ 0.08
TCOF1-209ENST00000506630 SYN1P17600 705 aa15.55■□□□□ 0.08
TCOF1-209ENST00000506630 CHMLP26374 656 aa15.55■□□□□ 0.08
TCOF1-209ENST00000506630 HOXA7P31268 230 aaPredicted RBP15.55■□□□□ 0.08
TCOF1-209ENST00000506630 HAND2P61296 217 aa15.55■□□□□ 0.08
TCOF1-209ENST00000506630 RUFY2Q8WXA3 655 aa15.55■□□□□ 0.08
TCOF1-209ENST00000506630 P2RX7Q99572 595 aaKnown RBP15.55■□□□□ 0.08
TCOF1-209ENST00000506630 GJD2Q9UKL4 321 aa15.55■□□□□ 0.08
TCOF1-209ENST00000506630 STXBP5LQ9Y2K9 1186 aa15.55■□□□□ 0.08
TCOF1-209ENST00000506630 A0A0G2JMZ2 1700 aa15.54■□□□□ 0.08
TCOF1-209ENST00000506630 PLIN4Q96Q06 1357 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms