RNA–Protein interactions for RNA: ENST00000506161.5

PDLIM7-215, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-215ENST00000506161 NKX2-3Q8TAU0 364 aa20.09■□□□□ 0.81
PDLIM7-215ENST00000506161 USP6NLQ92738 828 aa20.09■□□□□ 0.81
PDLIM7-215ENST00000506161 HTATIP2Q9BUP3 242 aa20.09■□□□□ 0.81
PDLIM7-215ENST00000506161 PRO3102Q9H379 93 aa20.09■□□□□ 0.81
PDLIM7-215ENST00000506161 GJB1P08034 283 aa20.08■□□□□ 0.81
PDLIM7-215ENST00000506161 CYP2B6P20813 491 aa20.08■□□□□ 0.81
PDLIM7-215ENST00000506161 RASA1P20936 1047 aa20.08■□□□□ 0.81
PDLIM7-215ENST00000506161 GJA8P48165 433 aa20.08■□□□□ 0.81
PDLIM7-215ENST00000506161 USP14P54578 494 aa20.08■□□□□ 0.81
PDLIM7-215ENST00000506161 ICA1Q05084 483 aa20.08■□□□□ 0.81
PDLIM7-215ENST00000506161 CCL14Q16627 93 aa20.08■□□□□ 0.81
PDLIM7-215ENST00000506161 GPR142Q7Z601 462 aa20.08■□□□□ 0.81
PDLIM7-215ENST00000506161 UBE2Q1Q7Z7E8 422 aa20.08■□□□□ 0.81
PDLIM7-215ENST00000506161 SPICE1Q8N0Z3 855 aa20.08■□□□□ 0.81
PDLIM7-215ENST00000506161 ARPP21Q9UBL0 812 aaPredicted RBP20.08■□□□□ 0.81
PDLIM7-215ENST00000506161 TMX2Q9Y320 296 aa20.08■□□□□ 0.81
PDLIM7-215ENST00000506161 TACC3Q9Y6A5 838 aa20.08■□□□□ 0.81
PDLIM7-215ENST00000506161 MINDY4BA8MYZ0 360 aa20.07■□□□□ 0.8
PDLIM7-215ENST00000506161 EEF2P13639 858 aaKnown RBP20.07■□□□□ 0.8
PDLIM7-215ENST00000506161 PDE1AP54750 535 aa20.07■□□□□ 0.8
PDLIM7-215ENST00000506161 UBXN2AP68543 259 aa20.07■□□□□ 0.8
PDLIM7-215ENST00000506161 MORN1Q5T089 497 aa20.07■□□□□ 0.8
PDLIM7-215ENST00000506161 LBX2Q6XYB7 198 aa20.07■□□□□ 0.8
PDLIM7-215ENST00000506161 U2AF1L4Q8WU68 220 aaKnown RBP20.07■□□□□ 0.8
PDLIM7-215ENST00000506161 FSD1Q9BTV5 496 aa20.07■□□□□ 0.8
PDLIM7-215ENST00000506161 STAP2Q9UGK3 403 aa20.07■□□□□ 0.8
PDLIM7-215ENST00000506161 ERC2O15083 957 aa20.06■□□□□ 0.8
PDLIM7-215ENST00000506161 SMC5Q8IY18 1101 aa20.06■□□□□ 0.8
PDLIM7-215ENST00000506161 IFNL3Q8IZI9 196 aa20.06■□□□□ 0.8
PDLIM7-215ENST00000506161 LNPKQ9C0E8 428 aa20.06■□□□□ 0.8
PDLIM7-215ENST00000506161 PAK6Q9NQU5 681 aaPredicted RBP20.06■□□□□ 0.8
PDLIM7-215ENST00000506161 RABGAP1Q9Y3P9 1069 aa20.06■□□□□ 0.8
PDLIM7-215ENST00000506161 NR2E3Q9Y5X4 410 aa20.06■□□□□ 0.8
PDLIM7-215ENST00000506161 ZNF236Q9UL36 1845 aa20.06■□□□□ 0.8
PDLIM7-215ENST00000506161 RANBP2P49792 3224 aaKnown RBP20.06■□□□□ 0.8
PDLIM7-215ENST00000506161 PRDM1O75626 825 aa20.05■□□□□ 0.8
PDLIM7-215ENST00000506161 ZFYP08048 801 aaPredicted RBP20.05■□□□□ 0.8
PDLIM7-215ENST00000506161 CCDC17Q96LX7 622 aa20.05■□□□□ 0.8
PDLIM7-215ENST00000506161 DEFB118Q96PH6 123 aa20.05■□□□□ 0.8
PDLIM7-215ENST00000506161 VCPKMTQ9H867 229 aa20.05■□□□□ 0.8
PDLIM7-215ENST00000506161 FBXO28Q9NVF7 368 aa20.05■□□□□ 0.8
PDLIM7-215ENST00000506161 PLXNA1Q9UIW2 1896 aa20.05■□□□□ 0.8
PDLIM7-215ENST00000506161 A0A1W2PPC1 479 aa20.04■□□□□ 0.8
PDLIM7-215ENST00000506161 SGPL1O95470 568 aa20.04■□□□□ 0.8
PDLIM7-215ENST00000506161 VPS53Q5VIR6 699 aa20.04■□□□□ 0.8
PDLIM7-215ENST00000506161 B4GALNT3Q6L9W6 998 aa20.04■□□□□ 0.8
PDLIM7-215ENST00000506161 GIMAP6Q6P9H5 292 aa20.04■□□□□ 0.8
PDLIM7-215ENST00000506161 ATG4CQ96DT6 458 aa20.04■□□□□ 0.8
PDLIM7-215ENST00000506161 TANGO6Q9C0B7 1094 aa20.04■□□□□ 0.8
PDLIM7-215ENST00000506161 INCENPQ9NQS7 918 aa20.04■□□□□ 0.8
PDLIM7-215ENST00000506161 FLRT1Q9NZU1 646 aa20.04■□□□□ 0.8
PDLIM7-215ENST00000506161 SUPT16HQ9Y5B9 1047 aaKnown RBP20.04■□□□□ 0.8
PDLIM7-215ENST00000506161 IGKV6D-41A0A0C4DH26 115 aa20.03■□□□□ 0.8
PDLIM7-215ENST00000506161 PATL2C9JE40 543 aaKnown RBP20.03■□□□□ 0.8
PDLIM7-215ENST00000506161 HMGCRP04035 888 aa20.03■□□□□ 0.8
PDLIM7-215ENST00000506161 ATP2B2Q01814 1243 aa20.03■□□□□ 0.8
PDLIM7-215ENST00000506161 PLEKHH3Q7Z736 793 aa20.03■□□□□ 0.8
PDLIM7-215ENST00000506161 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.03■□□□□ 0.88e-9■■■■□ 19.6
PDLIM7-215ENST00000506161 ARHGEF10LQ9HCE6 1279 aa20.03■□□□□ 0.8
PDLIM7-215ENST00000506161 MAPK4P31152 587 aa20.02■□□□□ 0.8
PDLIM7-215ENST00000506161 DSG3P32926 999 aa20.02■□□□□ 0.8
PDLIM7-215ENST00000506161 TDO2P48775 406 aa20.02■□□□□ 0.8
PDLIM7-215ENST00000506161 MNX1P50219 401 aaPredicted RBP20.02■□□□□ 0.8
PDLIM7-215ENST00000506161 MAP3K21Q5TCX8 1036 aa20.02■□□□□ 0.8
PDLIM7-215ENST00000506161 NPLOC4Q8TAT6 608 aa20.02■□□□□ 0.8
PDLIM7-215ENST00000506161 DIS3LQ8TF46 1054 aaKnown RBP20.02■□□□□ 0.8
PDLIM7-215ENST00000506161 GTF3C2Q8WUA4 911 aaPredicted RBP20.02■□□□□ 0.8
PDLIM7-215ENST00000506161 DDRGK1Q96HY6 314 aa20.02■□□□□ 0.8
PDLIM7-215ENST00000506161 FAM227BQ96M60 508 aa20.02■□□□□ 0.8
PDLIM7-215ENST00000506161 NUP88Q99567 741 aaPredicted RBP20.02■□□□□ 0.8
PDLIM7-215ENST00000506161 NUDT12Q9BQG2 462 aa20.02■□□□□ 0.8
PDLIM7-215ENST00000506161 MOV10L1Q9BXT6 1211 aaKnown RBP20.02■□□□□ 0.8
PDLIM7-215ENST00000506161 CRISPLD2Q9H0B8 497 aa20.02■□□□□ 0.8
PDLIM7-215ENST00000506161 A0A0D9SFI3 127 aa20.01■□□□□ 0.79
PDLIM7-215ENST00000506161 APPP05067 770 aa20.01■□□□□ 0.79
PDLIM7-215ENST00000506161 IRX6P78412 446 aaPredicted RBP20.01■□□□□ 0.79
PDLIM7-215ENST00000506161 COG2Q14746 738 aa20.01■□□□□ 0.79
PDLIM7-215ENST00000506161 SAMD1Q6SPF0 538 aaPredicted RBP20.01■□□□□ 0.79
PDLIM7-215ENST00000506161 AMOTL1Q8IY63 956 aa20.01■□□□□ 0.79
PDLIM7-215ENST00000506161 PTPREP23469 700 aa20■□□□□ 0.79
PDLIM7-215ENST00000506161 CCND3P30281 292 aaPredicted RBP20■□□□□ 0.79
PDLIM7-215ENST00000506161 CACNB2Q08289 660 aaPredicted RBP20■□□□□ 0.79
PDLIM7-215ENST00000506161 PLEKHM2Q8IWE5 1019 aa20■□□□□ 0.79
PDLIM7-215ENST00000506161 KANSL2Q9H9L4 492 aa20■□□□□ 0.79
PDLIM7-215ENST00000506161 SOX1O00570 391 aaPredicted RBP19.99■□□□□ 0.79
PDLIM7-215ENST00000506161 FLOT1O75955 427 aa19.99■□□□□ 0.79
PDLIM7-215ENST00000506161 IGHA2P01877 340 aa19.99■□□□□ 0.79
PDLIM7-215ENST00000506161 XRCC5P13010 732 aaKnown RBP19.99■□□□□ 0.79
PDLIM7-215ENST00000506161 GNAT2P19087 354 aa19.99■□□□□ 0.79
PDLIM7-215ENST00000506161 CTDSPL2Q05D32 466 aa19.99■□□□□ 0.79
PDLIM7-215ENST00000506161 MAP2K5Q13163 448 aa19.99■□□□□ 0.79
PDLIM7-215ENST00000506161 FAM83BQ5T0W9 1011 aa19.99■□□□□ 0.79
PDLIM7-215ENST00000506161 WDR78Q5VTH9 848 aa19.99■□□□□ 0.79
PDLIM7-215ENST00000506161 ZNF589Q86UQ0 364 aaPredicted RBP19.99■□□□□ 0.79
PDLIM7-215ENST00000506161 SOCS4Q8WXH5 440 aa19.99■□□□□ 0.79
PDLIM7-215ENST00000506161 LPAR1Q92633 364 aa19.99■□□□□ 0.79
PDLIM7-215ENST00000506161 LRCH3Q96II8 777 aa19.99■□□□□ 0.79
PDLIM7-215ENST00000506161 SMCHD1A6NHR9 2005 aa19.98■□□□□ 0.79
PDLIM7-215ENST00000506161 LAMA4Q16363 1823 aa19.98■□□□□ 0.79
PDLIM7-215ENST00000506161 WDR46O15213 610 aaKnown RBP19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms