RNA–Protein interactions for RNA: ENST00000505964.1

SGCA-205, Transcript of sarcoglycan alpha, humanhuman

TSL 2

Gene SGCA, Length 494 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-205ENST00000505964 STK11IPQ8N1F8 1099 aa13.3□□□□□ -0.28
SGCA-205ENST00000505964 NKX2-3Q8TAU0 364 aa13.3□□□□□ -0.28
SGCA-205ENST00000505964 IGDCC4Q8TDY8 1250 aa13.3□□□□□ -0.28
SGCA-205ENST00000505964 BRF1Q92994 677 aa13.3□□□□□ -0.28
SGCA-205ENST00000505964 CHMP4CQ96CF2 233 aa13.3□□□□□ -0.28
SGCA-205ENST00000505964 ZNF274Q96GC6 653 aaPredicted RBP13.3□□□□□ -0.28
SGCA-205ENST00000505964 UBAC1Q9BSL1 405 aa13.3□□□□□ -0.28
SGCA-205ENST00000505964 TCP11L1Q9NUJ3 509 aa13.3□□□□□ -0.28
SGCA-205ENST00000505964 HERC5Q9UII4 1024 aaKnown RBP13.3□□□□□ -0.28
SGCA-205ENST00000505964 PPP2R3BQ9Y5P8 575 aa13.3□□□□□ -0.28
SGCA-205ENST00000505964 PLIN4Q96Q06 1357 aa13.3□□□□□ -0.28
SGCA-205ENST00000505964 TSPY2A6NKD2 308 aa13.29□□□□□ -0.28
SGCA-205ENST00000505964 IFIT3O14879 490 aaKnown RBP13.29□□□□□ -0.28
SGCA-205ENST00000505964 TBC1D12O60347 775 aa13.29□□□□□ -0.28
SGCA-205ENST00000505964 TFAP4Q01664 338 aa13.29□□□□□ -0.28
SGCA-205ENST00000505964 SEC23AQ15436 765 aa13.29□□□□□ -0.28
SGCA-205ENST00000505964 TAF1CQ15572 869 aaPredicted RBP13.29□□□□□ -0.28
SGCA-205ENST00000505964 TMEM67Q5HYA8 995 aa13.29□□□□□ -0.28
SGCA-205ENST00000505964 ANKRD13AQ8IZ07 590 aa13.29□□□□□ -0.28
SGCA-205ENST00000505964 CRACR2BQ8N4Y2 399 aaPredicted RBP13.29□□□□□ -0.28
SGCA-205ENST00000505964 NEDD1Q8NHV4 660 aa13.29□□□□□ -0.28
SGCA-205ENST00000505964 SH3TC2Q8TF17 1288 aa13.29□□□□□ -0.28
SGCA-205ENST00000505964 INTS4Q96HW7 963 aaKnown RBP13.29□□□□□ -0.28
SGCA-205ENST00000505964 CCDC17Q96LX7 622 aa13.29□□□□□ -0.28
SGCA-205ENST00000505964 ZSCAN10Q96SZ4 725 aaPredicted RBP13.29□□□□□ -0.28
SGCA-205ENST00000505964 TRIM34Q9BYJ4 488 aa13.29□□□□□ -0.28
SGCA-205ENST00000505964 LRRC2Q9BYS8 371 aa13.29□□□□□ -0.28
SGCA-205ENST00000505964 TPCN1Q9ULQ1 816 aa13.29□□□□□ -0.28
SGCA-205ENST00000505964 TESPA1A2RU30 521 aaPredicted RBP13.28□□□□□ -0.28
SGCA-205ENST00000505964 TSPY3P0CV98 308 aa13.28□□□□□ -0.28
SGCA-205ENST00000505964 TSPY8P0CW00 308 aa13.28□□□□□ -0.28
SGCA-205ENST00000505964 SHMT1P34896 483 aa13.28□□□□□ -0.28
SGCA-205ENST00000505964 RCAN1P53805 252 aa13.28□□□□□ -0.28
SGCA-205ENST00000505964 MAP3K10Q02779 954 aa13.28□□□□□ -0.28
SGCA-205ENST00000505964 WTAPQ15007 396 aa13.28□□□□□ -0.28
SGCA-205ENST00000505964 TATDN1Q6P1N9 297 aa13.28□□□□□ -0.28
SGCA-205ENST00000505964 CHRDL2Q6WN34 429 aa13.28□□□□□ -0.28
SGCA-205ENST00000505964 NBPF11Q86T75 865 aa13.28□□□□□ -0.28
SGCA-205ENST00000505964 DGKHQ86XP1 1220 aa13.28□□□□□ -0.28
SGCA-205ENST00000505964 SLC44A5Q8NCS7 719 aa13.28□□□□□ -0.28
SGCA-205ENST00000505964 BRI3BPQ8WY22 251 aa13.28□□□□□ -0.28
SGCA-205ENST00000505964 ANKS1AQ92625 1134 aa13.28□□□□□ -0.28
SGCA-205ENST00000505964 OTUD5Q96G74 571 aa13.28□□□□□ -0.28
SGCA-205ENST00000505964 MS4A4AQ96JQ5 239 aa13.28□□□□□ -0.28
SGCA-205ENST00000505964 ARHGAP39Q9C0H5 1083 aa13.28□□□□□ -0.28
SGCA-205ENST00000505964 LY9Q9HBG7 655 aa13.28□□□□□ -0.28
SGCA-205ENST00000505964 TNKSO95271 1327 aa13.28□□□□□ -0.28
SGCA-205ENST00000505964 CUL9Q8IWT3 2517 aa13.28□□□□□ -0.28
SGCA-205ENST00000505964 MGAMO43451 1857 aa13.27□□□□□ -0.28
SGCA-205ENST00000505964 CCL15-CCL14A0A0B4J2E2 113 aa13.27□□□□□ -0.29
SGCA-205ENST00000505964 PFKFB2O60825 505 aa13.27□□□□□ -0.29
SGCA-205ENST00000505964 NOVP48745 357 aa13.27□□□□□ -0.29
SGCA-205ENST00000505964 SLC4A3P48751 1232 aa13.27□□□□□ -0.29
SGCA-205ENST00000505964 APOBRQ0VD83 1088 aa13.27□□□□□ -0.29
SGCA-205ENST00000505964 CCL15Q16663 113 aa13.27□□□□□ -0.29
SGCA-205ENST00000505964 ME3Q16798 604 aa13.27□□□□□ -0.29
SGCA-205ENST00000505964 FAM47AQ5JRC9 791 aa13.27□□□□□ -0.29
SGCA-205ENST00000505964 PPP4R3BQ5MIZ7 849 aa13.27□□□□□ -0.29
SGCA-205ENST00000505964 NOL8Q76FK4 1167 aaKnown RBP13.27□□□□□ -0.29
SGCA-205ENST00000505964 FAM43AQ8N2R8 423 aa13.27□□□□□ -0.29
SGCA-205ENST00000505964 ENAHQ8N8S7 591 aaPredicted RBP13.27□□□□□ -0.29
SGCA-205ENST00000505964 HOOK2Q96ED9 719 aa13.27□□□□□ -0.29
SGCA-205ENST00000505964 TEPSINQ96N21 525 aa13.27□□□□□ -0.29
SGCA-205ENST00000505964 DNAJC18Q9H819 358 aa13.27□□□□□ -0.29
SGCA-205ENST00000505964 MYH6P13533 1939 aa13.27□□□□□ -0.29
SGCA-205ENST00000505964 KLF18A0A0U1RQI7 1052 aa13.26□□□□□ -0.29
SGCA-205ENST00000505964 UNCXA6NJT0 531 aa13.26□□□□□ -0.29
SGCA-205ENST00000505964 LARGE1O95461 756 aa13.26□□□□□ -0.29
SGCA-205ENST00000505964 HSP90AA1P07900 732 aaKnown RBP13.26□□□□□ -0.29
SGCA-205ENST00000505964 PDIA3P30101 505 aaKnown RBP13.26□□□□□ -0.29
SGCA-205ENST00000505964 NID2Q14112 1375 aa13.26□□□□□ -0.29
SGCA-205ENST00000505964 VGLL4Q14135 290 aa13.26□□□□□ -0.29
SGCA-205ENST00000505964 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.26□□□□□ -0.29
SGCA-205ENST00000505964 UNC80Q8N2C7 3258 aa13.26□□□□□ -0.29
SGCA-205ENST00000505964 GTF3C6Q969F1 213 aa13.26□□□□□ -0.29
SGCA-205ENST00000505964 ZKSCAN3Q9BRR0 538 aa13.26□□□□□ -0.29
SGCA-205ENST00000505964 LARP6Q9BRS8 491 aaKnown RBP13.26□□□□□ -0.29
SGCA-205ENST00000505964 TMEM39BQ9GZU3 492 aa13.26□□□□□ -0.29
SGCA-205ENST00000505964 SLKQ9H2G2 1235 aaPredicted RBP13.26□□□□□ -0.29
SGCA-205ENST00000505964 ZFYVE28Q9HCC9 887 aa13.26□□□□□ -0.29
SGCA-205ENST00000505964 GPHNQ9NQX3 736 aaPredicted RBP13.26□□□□□ -0.29
SGCA-205ENST00000505964 BRPF3Q9ULD4 1205 aa13.26□□□□□ -0.29
SGCA-205ENST00000505964 DOCK1Q14185 1865 aa13.25□□□□□ -0.29
SGCA-205ENST00000505964 CCDC69A6NI79 296 aa13.25□□□□□ -0.29
SGCA-205ENST00000505964 PPP2R5BQ15173 497 aa13.25□□□□□ -0.29
SGCA-205ENST00000505964 CERKLQ49MI3 558 aaPredicted RBP13.25□□□□□ -0.29
SGCA-205ENST00000505964 IFIT1BQ5T764 474 aaKnown RBP13.25□□□□□ -0.29
SGCA-205ENST00000505964 APOA5Q6Q788 366 aa13.25□□□□□ -0.29
SGCA-205ENST00000505964 SYNE3Q6ZMZ3 975 aa13.25□□□□□ -0.29
SGCA-205ENST00000505964 NFXL1Q6ZNB6 911 aa13.25□□□□□ -0.29
SGCA-205ENST00000505964 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.25□□□□□ -0.29
SGCA-205ENST00000505964 CWC22Q9HCG8 908 aaKnown RBP13.25□□□□□ -0.29
SGCA-205ENST00000505964 IL17RBQ9NRM6 502 aa13.25□□□□□ -0.29
SGCA-205ENST00000505964 RBM27Q9P2N5 1060 aaKnown RBP13.25□□□□□ -0.29
SGCA-205ENST00000505964 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.25□□□□□ -0.29
SGCA-205ENST00000505964 SLC12A7Q9Y666 1083 aa13.25□□□□□ -0.29
SGCA-205ENST00000505964 IGKV6D-41A0A0C4DH26 115 aa13.24□□□□□ -0.29
SGCA-205ENST00000505964 ZBTB43O43298 467 aa13.24□□□□□ -0.29
SGCA-205ENST00000505964 DHX16O60231 1041 aaKnown RBP13.24□□□□□ -0.29
SGCA-205ENST00000505964 CALM1P0DP23 149 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms