RNA–Protein interactions for RNA: ENST00000504884.6

SNCAIP-207, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SNCAIP, Length 1,885 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-207ENST00000504884 EYA3Q99504 573 aa17.67■□□□□ 0.42
SNCAIP-207ENST00000504884 TMEM47Q9BQJ4 181 aa17.67■□□□□ 0.42
SNCAIP-207ENST00000504884 LZTS2Q9BRK4 669 aa17.67■□□□□ 0.42
SNCAIP-207ENST00000504884 CLIP2Q9UDT6 1046 aa17.67■□□□□ 0.42
SNCAIP-207ENST00000504884 NAV1Q8NEY1 1877 aa17.67■□□□□ 0.42
SNCAIP-207ENST00000504884 NRXN2Q9P2S2 1712 aa17.67■□□□□ 0.42
SNCAIP-207ENST00000504884 TRAPPC10P48553 1259 aa17.67■□□□□ 0.42
SNCAIP-207ENST00000504884 GRIN1Q05586 938 aa17.67■□□□□ 0.42
SNCAIP-207ENST00000504884 SPECC1Q5M775 1068 aa17.67■□□□□ 0.42
SNCAIP-207ENST00000504884 CCDC186Q7Z3E2 898 aa17.67■□□□□ 0.42
SNCAIP-207ENST00000504884 FERMT2Q96AC1 680 aa17.67■□□□□ 0.42
SNCAIP-207ENST00000504884 MAD2L2Q9UI95 211 aa17.67■□□□□ 0.42
SNCAIP-207ENST00000504884 STX8Q9UNK0 236 aa17.67■□□□□ 0.42
SNCAIP-207ENST00000504884 DAGLAQ9Y4D2 1042 aa17.67■□□□□ 0.42
SNCAIP-207ENST00000504884 ANKRD31Q8N7Z5 1873 aa17.66■□□□□ 0.42
SNCAIP-207ENST00000504884 FAM205CA6NFA0 338 aa17.66■□□□□ 0.42
SNCAIP-207ENST00000504884 MDM2Q00987 491 aaPredicted RBP17.66■□□□□ 0.42
SNCAIP-207ENST00000504884 PNOCQ13519 176 aa17.66■□□□□ 0.42
SNCAIP-207ENST00000504884 NOLC1Q14978 699 aaKnown RBP eCLIP17.66■□□□□ 0.42
SNCAIP-207ENST00000504884 METTL16Q86W50 562 aaKnown RBP17.66■□□□□ 0.42
SNCAIP-207ENST00000504884 STAG2Q8N3U4 1231 aa17.66■□□□□ 0.42
SNCAIP-207ENST00000504884 CSRNP2Q9H175 543 aa17.66■□□□□ 0.42
SNCAIP-207ENST00000504884 PALM3A6NDB9 673 aaPredicted RBP17.65■□□□□ 0.42
SNCAIP-207ENST00000504884 IKBKBO14920 756 aa17.65■□□□□ 0.42
SNCAIP-207ENST00000504884 POLR2DO15514 142 aaKnown RBP17.65■□□□□ 0.42
SNCAIP-207ENST00000504884 PTGS1P23219 599 aa17.65■□□□□ 0.42
SNCAIP-207ENST00000504884 TTC38Q5R3I4 469 aa17.65■□□□□ 0.42
SNCAIP-207ENST00000504884 FAM177A1Q8N128 213 aaPredicted RBP17.65■□□□□ 0.42
SNCAIP-207ENST00000504884 CCDC34Q96HJ3 373 aa17.65■□□□□ 0.42
SNCAIP-207ENST00000504884 KCNF1Q9H3M0 494 aa17.65■□□□□ 0.42
SNCAIP-207ENST00000504884 G3V3G9 751 aa17.65■□□□□ 0.42
SNCAIP-207ENST00000504884 DCAF8Q5TAQ9 597 aa17.65■□□□□ 0.42
SNCAIP-207ENST00000504884 FOXP4Q8IVH2 680 aaPredicted RBP17.65■□□□□ 0.42
SNCAIP-207ENST00000504884 KIAA1524Q8TCG1 905 aa17.65■□□□□ 0.42
SNCAIP-207ENST00000504884 PCDHA5Q9Y5H7 936 aa17.65■□□□□ 0.42
SNCAIP-207ENST00000504884 TERF1P54274 439 aa17.64■□□□□ 0.41
SNCAIP-207ENST00000504884 ZNF174Q15697 407 aa17.64■□□□□ 0.41
SNCAIP-207ENST00000504884 GALNT17Q6IS24 598 aa17.64■□□□□ 0.41
SNCAIP-207ENST00000504884 OLFM4Q6UX06 510 aa17.64■□□□□ 0.41
SNCAIP-207ENST00000504884 SPTLC3Q9NUV7 552 aa17.64■□□□□ 0.41
SNCAIP-207ENST00000504884 VEGFAP15692 232 aaPredicted RBP17.63■□□□□ 0.41
SNCAIP-207ENST00000504884 RXRBP28702 533 aa17.63■□□□□ 0.41
SNCAIP-207ENST00000504884 POSTNQ15063 836 aa17.63■□□□□ 0.41
SNCAIP-207ENST00000504884 ISM2Q6H9L7 571 aa17.63■□□□□ 0.41
SNCAIP-207ENST00000504884 BLIDQ8IZY5 108 aa17.63■□□□□ 0.41
SNCAIP-207ENST00000504884 SERTAD1Q9UHV2 236 aa17.63■□□□□ 0.41
SNCAIP-207ENST00000504884 NRBP1Q9UHY1 535 aa17.63■□□□□ 0.41
SNCAIP-207ENST00000504884 TTF2Q9UNY4 1162 aaKnown RBP17.63■□□□□ 0.41
SNCAIP-207ENST00000504884 CDK5RAP2Q96SN8 1893 aa17.63■□□□□ 0.41
SNCAIP-207ENST00000504884 TOP1P11387 765 aaKnown RBP17.63■□□□□ 0.41
SNCAIP-207ENST00000504884 SMARCA1P28370 1054 aa17.63■□□□□ 0.41
SNCAIP-207ENST00000504884 NOVP48745 357 aa17.63■□□□□ 0.41
SNCAIP-207ENST00000504884 ATP2C1P98194 919 aaPredicted RBP17.63■□□□□ 0.41
SNCAIP-207ENST00000504884 NCAPHQ15003 741 aa17.63■□□□□ 0.41
SNCAIP-207ENST00000504884 DOK7Q18PE1 504 aa17.63■□□□□ 0.41
SNCAIP-207ENST00000504884 NT5DC1Q5TFE4 455 aa17.63■□□□□ 0.41
SNCAIP-207ENST00000504884 PIK3AP1Q6ZUJ8 805 aa17.63■□□□□ 0.41
SNCAIP-207ENST00000504884 CERS5Q8N5B7 392 aa17.63■□□□□ 0.41
SNCAIP-207ENST00000504884 ZNF622Q969S3 477 aaKnown RBP eCLIP17.63■□□□□ 0.41
SNCAIP-207ENST00000504884 PCDHA4Q9UN74 947 aa17.63■□□□□ 0.41
SNCAIP-207ENST00000504884 PTGDRQ13258 359 aa17.62■□□□□ 0.41
SNCAIP-207ENST00000504884 HHIPL2Q6UWX4 724 aa17.62■□□□□ 0.41
SNCAIP-207ENST00000504884 PODNQ7Z5L7 613 aa17.62■□□□□ 0.41
SNCAIP-207ENST00000504884 CCDC148Q8NFR7 591 aa17.62■□□□□ 0.41
SNCAIP-207ENST00000504884 BAZ2BQ9UIF8 2168 aaKnown RBP17.62■□□□□ 0.41
SNCAIP-207ENST00000504884 KLRF2D3W0D1 207 aa17.61■□□□□ 0.41
SNCAIP-207ENST00000504884 F8W031 263 aaPredicted RBP17.61■□□□□ 0.41
SNCAIP-207ENST00000504884 CYTH3O43739 400 aa17.61■□□□□ 0.41
SNCAIP-207ENST00000504884 SARSP49591 514 aaKnown RBP17.61■□□□□ 0.41
SNCAIP-207ENST00000504884 NOM1Q5C9Z4 860 aaKnown RBP17.61■□□□□ 0.41
SNCAIP-207ENST00000504884 USP49Q70CQ1 688 aa17.61■□□□□ 0.41
SNCAIP-207ENST00000504884 SPZ1Q9BXG8 430 aa17.61■□□□□ 0.41
SNCAIP-207ENST00000504884 USP40Q9NVE5 1235 aa17.61■□□□□ 0.41
SNCAIP-207ENST00000504884 PYCARDQ9ULZ3 195 aa17.61■□□□□ 0.41
SNCAIP-207ENST00000504884 MYH1P12882 1939 aa17.61■□□□□ 0.41
SNCAIP-207ENST00000504884 SNED1Q8TER0 1413 aa17.61■□□□□ 0.41
SNCAIP-207ENST00000504884 H0YIN7 160 aa17.61■□□□□ 0.41
SNCAIP-207ENST00000504884 ACTN4O43707 911 aaKnown RBP17.61■□□□□ 0.41
SNCAIP-207ENST00000504884 NEMFO60524 1076 aa17.61■□□□□ 0.41
SNCAIP-207ENST00000504884 PARP1P09874 1014 aaKnown RBP17.61■□□□□ 0.41
SNCAIP-207ENST00000504884 GABPAQ06546 454 aa17.61■□□□□ 0.41
SNCAIP-207ENST00000504884 STYK1Q6J9G0 422 aa17.61■□□□□ 0.41
SNCAIP-207ENST00000504884 C2CD5Q86YS7 1000 aa17.61■□□□□ 0.41
SNCAIP-207ENST00000504884 PDILTQ8N807 584 aa17.61■□□□□ 0.41
SNCAIP-207ENST00000504884 TRIML1Q8N9V2 468 aa17.61■□□□□ 0.41
SNCAIP-207ENST00000504884 DAGLBQ8NCG7 672 aa17.61■□□□□ 0.41
SNCAIP-207ENST00000504884 SMARCE1Q969G3 411 aa17.61■□□□□ 0.41
SNCAIP-207ENST00000504884 CEP95Q96GE4 821 aa17.61■□□□□ 0.41
SNCAIP-207ENST00000504884 BARHL2Q9NY43 387 aa17.61■□□□□ 0.41
SNCAIP-207ENST00000504884 DDX60LQ5H9U9 1706 aaKnown RBP17.6■□□□□ 0.41
SNCAIP-207ENST00000504884 WNT7AO00755 349 aa17.6■□□□□ 0.41
SNCAIP-207ENST00000504884 FOXN1O15353 648 aa17.6■□□□□ 0.41
SNCAIP-207ENST00000504884 MYO1BO43795 1136 aa17.6■□□□□ 0.41
SNCAIP-207ENST00000504884 MYL5Q02045 173 aa17.6■□□□□ 0.41
SNCAIP-207ENST00000504884 PICALMQ13492 652 aa17.6■□□□□ 0.41
SNCAIP-207ENST00000504884 GPKOWQ92917 476 aaPredicted RBP eCLIP17.6■□□□□ 0.41
SNCAIP-207ENST00000504884 MRIQ9BWK5 157 aa17.6■□□□□ 0.41
SNCAIP-207ENST00000504884 SLFN14P0C7P3 912 aa17.59■□□□□ 0.41
SNCAIP-207ENST00000504884 SLC35G1Q2M3R5 365 aa17.59■□□□□ 0.41
SNCAIP-207ENST00000504884 CCDC144BQ3MJ40 725 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms