RNA–Protein interactions for RNA: ENST00000504813.5

CNBP-208, Transcript of CCHC-type zinc finger nucleic acid binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CNBP, Length 1,549 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNBP-208ENST00000504813 ERVK-9P63128 1117 aa17.58■□□□□ 0.41
CNBP-208ENST00000504813 ERVK-24P63145 666 aa17.58■□□□□ 0.41
CNBP-208ENST00000504813 ICA1Q05084 483 aa17.58■□□□□ 0.41
CNBP-208ENST00000504813 KIAA1755Q5JYT7 1200 aa17.58■□□□□ 0.41
CNBP-208ENST00000504813 LBX2Q6XYB7 198 aa17.58■□□□□ 0.41
CNBP-208ENST00000504813 TMX2Q9Y320 296 aa17.58■□□□□ 0.41
CNBP-208ENST00000504813 CNMDO75829 334 aa17.57■□□□□ 0.4
CNBP-208ENST00000504813 APPP05067 770 aa17.57■□□□□ 0.4
CNBP-208ENST00000504813 ELNP15502 786 aa17.57■□□□□ 0.4
CNBP-208ENST00000504813 PAGR1Q9BTK6 254 aa17.57■□□□□ 0.4
CNBP-208ENST00000504813 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.57■□□□□ 0.4
CNBP-208ENST00000504813 ARHGEF10LQ9HCE6 1279 aa17.57■□□□□ 0.4
CNBP-208ENST00000504813 COL11A1P12107 1806 aaPredicted RBP17.57■□□□□ 0.4
CNBP-208ENST00000504813 FOXP2O15409 715 aa17.57■□□□□ 0.4
CNBP-208ENST00000504813 RASA1P20936 1047 aa17.57■□□□□ 0.4
CNBP-208ENST00000504813 TDO2P48775 406 aa17.57■□□□□ 0.4
CNBP-208ENST00000504813 STK11IPQ8N1F8 1099 aa17.57■□□□□ 0.4
CNBP-208ENST00000504813 BACH2Q9BYV9 841 aa17.57■□□□□ 0.4
CNBP-208ENST00000504813 PORCNQ9H237 461 aa17.57■□□□□ 0.4
CNBP-208ENST00000504813 RABGAP1Q9Y3P9 1069 aa17.57■□□□□ 0.4
CNBP-208ENST00000504813 PDE4DIPQ5VU43 2346 aa17.56■□□□□ 0.4
CNBP-208ENST00000504813 SPDYE16A6NNV3 312 aaPredicted RBP17.56■□□□□ 0.4
CNBP-208ENST00000504813 EEF2P13639 858 aaKnown RBP17.56■□□□□ 0.4
CNBP-208ENST00000504813 UBXN2AP68543 259 aa17.56■□□□□ 0.4
CNBP-208ENST00000504813 LPAR1Q92633 364 aa17.56■□□□□ 0.4
CNBP-208ENST00000504813 SH2D4AQ9H788 454 aa17.56■□□□□ 0.4
CNBP-208ENST00000504813 VCPKMTQ9H867 229 aa17.56■□□□□ 0.4
CNBP-208ENST00000504813 KANSL2Q9H9L4 492 aa17.56■□□□□ 0.4
CNBP-208ENST00000504813 BIN2Q9UBW5 565 aaPredicted RBP17.56■□□□□ 0.4
CNBP-208ENST00000504813 CCL5P13501 91 aa17.55■□□□□ 0.4
CNBP-208ENST00000504813 MAPK4P31152 587 aa17.55■□□□□ 0.4
CNBP-208ENST00000504813 CCDC129Q6ZRS4 1044 aa17.55■□□□□ 0.4
CNBP-208ENST00000504813 TICAM2Q86XR7 235 aa17.55■□□□□ 0.4
CNBP-208ENST00000504813 PLEKHM2Q8IWE5 1019 aa17.55■□□□□ 0.4
CNBP-208ENST00000504813 NACAP1Q9BZK3 213 aa17.55■□□□□ 0.4
CNBP-208ENST00000504813 OSBPL3Q9H4L5 887 aa17.55■□□□□ 0.4
CNBP-208ENST00000504813 MKNK2Q9HBH9 465 aa17.55■□□□□ 0.4
CNBP-208ENST00000504813 BTBD7Q9P203 1132 aa17.55■□□□□ 0.4
CNBP-208ENST00000504813 INHAP05111 366 aa17.54■□□□□ 0.4
CNBP-208ENST00000504813 COG2Q14746 738 aa17.54■□□□□ 0.4
CNBP-208ENST00000504813 GPR142Q7Z601 462 aa17.53■□□□□ 0.4
CNBP-208ENST00000504813 SPICE1Q8N0Z3 855 aa17.53■□□□□ 0.4
CNBP-208ENST00000504813 SHISA4Q96DD7 197 aa17.53■□□□□ 0.4
CNBP-208ENST00000504813 TANGO6Q9C0B7 1094 aa17.53■□□□□ 0.4
CNBP-208ENST00000504813 RNF208Q9H0X6 261 aa17.53■□□□□ 0.4
CNBP-208ENST00000504813 NAPBQ9H115 298 aa17.53■□□□□ 0.4
CNBP-208ENST00000504813 HELLSQ9NRZ9 838 aa17.53■□□□□ 0.4
CNBP-208ENST00000504813 HOXC10Q9NYD6 342 aa17.53■□□□□ 0.4
CNBP-208ENST00000504813 WDR46O15213 610 aaKnown RBP17.52■□□□□ 0.4
CNBP-208ENST00000504813 GJB1P08034 283 aa17.52■□□□□ 0.4
CNBP-208ENST00000504813 SOCS4Q8WXH5 440 aa17.52■□□□□ 0.4
CNBP-208ENST00000504813 USP6NLQ92738 828 aa17.52■□□□□ 0.4
CNBP-208ENST00000504813 FAM227BQ96M60 508 aa17.52■□□□□ 0.4
CNBP-208ENST00000504813 NUDT12Q9BQG2 462 aa17.52■□□□□ 0.4
CNBP-208ENST00000504813 UNC93B1Q9H1C4 597 aa17.52■□□□□ 0.4
CNBP-208ENST00000504813 ZNF287Q9HBT7 754 aa17.52■□□□□ 0.4
CNBP-208ENST00000504813 RBM19Q9Y4C8 960 aaKnown RBP17.52■□□□□ 0.4
CNBP-208ENST00000504813 IGKV6D-41A0A0C4DH26 115 aa17.52■□□□□ 0.39
CNBP-208ENST00000504813 A0A0D9SFI3 127 aa17.52■□□□□ 0.39
CNBP-208ENST00000504813 TRIM6-TRIM34B2RNG4 842 aa17.52■□□□□ 0.39
CNBP-208ENST00000504813 PRDM1O75626 825 aa17.52■□□□□ 0.39
CNBP-208ENST00000504813 GJA8P48165 433 aa17.52■□□□□ 0.39
CNBP-208ENST00000504813 CCNA1P78396 465 aa17.52■□□□□ 0.39
CNBP-208ENST00000504813 ATP2B2Q01814 1243 aa17.52■□□□□ 0.39
CNBP-208ENST00000504813 PPARAQ07869 468 aa17.52■□□□□ 0.39
CNBP-208ENST00000504813 MORN1Q5T089 497 aa17.52■□□□□ 0.39
CNBP-208ENST00000504813 VPS53Q5VIR6 699 aa17.52■□□□□ 0.39
CNBP-208ENST00000504813 PLEKHH3Q7Z736 793 aa17.52■□□□□ 0.39
CNBP-208ENST00000504813 NYAP2Q9P242 653 aa17.52■□□□□ 0.39
CNBP-208ENST00000504813 ZNFX1Q9P2E3 1918 aaKnown RBP17.52■□□□□ 0.39
CNBP-208ENST00000504813 XRCC5P13010 732 aaKnown RBP17.51■□□□□ 0.39
CNBP-208ENST00000504813 CYP2B6P20813 491 aa17.51■□□□□ 0.39
CNBP-208ENST00000504813 DSG3P32926 999 aa17.51■□□□□ 0.39
CNBP-208ENST00000504813 MCMDC2Q4G0Z9 681 aa17.51■□□□□ 0.39
CNBP-208ENST00000504813 BMP2KLQ5H9B9 411 aa17.51■□□□□ 0.39
CNBP-208ENST00000504813 CCAR1Q8IX12 1150 aaKnown RBP17.51■□□□□ 0.39
CNBP-208ENST00000504813 ZNF444Q8N0Y2 327 aaPredicted RBP17.51■□□□□ 0.39
CNBP-208ENST00000504813 TRIB2Q92519 343 aa17.51■□□□□ 0.39
CNBP-208ENST00000504813 RILPL2Q969X0 211 aa17.51■□□□□ 0.39
CNBP-208ENST00000504813 GOPCQ9HD26 462 aa17.51■□□□□ 0.39
CNBP-208ENST00000504813 ZNF236Q9UL36 1845 aa17.51■□□□□ 0.39
CNBP-208ENST00000504813 FLOT1O75955 427 aa17.5■□□□□ 0.39
CNBP-208ENST00000504813 HMGCRP04035 888 aa17.5■□□□□ 0.39
CNBP-208ENST00000504813 PDE4BQ07343 736 aa17.5■□□□□ 0.39
CNBP-208ENST00000504813 NMIQ13287 307 aaPredicted RBP17.5■□□□□ 0.39
CNBP-208ENST00000504813 C8orf34Q49A92 452 aa17.5■□□□□ 0.39
CNBP-208ENST00000504813 NKX2-3Q8TAU0 364 aa17.5■□□□□ 0.39
CNBP-208ENST00000504813 PAK6Q9NQU5 681 aaPredicted RBP17.5■□□□□ 0.39
CNBP-208ENST00000504813 PLIN4Q96Q06 1357 aa17.5■□□□□ 0.39
CNBP-208ENST00000504813 TRIM32Q13049 653 aa17.49■□□□□ 0.39
CNBP-208ENST00000504813 ALX1Q15699 326 aa17.49■□□□□ 0.39
CNBP-208ENST00000504813 MB21D1Q8N884 522 aa17.49■□□□□ 0.39
CNBP-208ENST00000504813 U2AF1L4Q8WU68 220 aaKnown RBP17.49■□□□□ 0.39
CNBP-208ENST00000504813 ATG4CQ96DT6 458 aa17.49■□□□□ 0.39
CNBP-208ENST00000504813 ADAMTS5Q9UNA0 930 aa17.49■□□□□ 0.39
CNBP-208ENST00000504813 SGPL1O95470 568 aa17.48■□□□□ 0.39
CNBP-208ENST00000504813 SLC3A2P08195 630 aaKnown RBP17.48■□□□□ 0.39
CNBP-208ENST00000504813 SDSP20132 328 aa17.48■□□□□ 0.39
CNBP-208ENST00000504813 PTPREP23469 700 aa17.48■□□□□ 0.39
CNBP-208ENST00000504813 ZNF589Q86UQ0 364 aaPredicted RBP17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms