RNA–Protein interactions for RNA: ENST00000504781.5

DDX41-203, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 618 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-203ENST00000504781 TTLL1O95922 423 aa11.78□□□□□ -0.52
DDX41-203ENST00000504781 AKAP17AQ02040 695 aaKnown RBP11.78□□□□□ -0.52
DDX41-203ENST00000504781 NBPF9Q3BBW0 867 aa11.78□□□□□ -0.52
DDX41-203ENST00000504781 NBPF11Q86T75 865 aa11.78□□□□□ -0.52
DDX41-203ENST00000504781 MICALL2Q8IY33 904 aa11.78□□□□□ -0.52
DDX41-203ENST00000504781 HOOK2Q96ED9 719 aa11.78□□□□□ -0.52
DDX41-203ENST00000504781 CSRNP1Q96S65 589 aa11.78□□□□□ -0.52
DDX41-203ENST00000504781 ANP32EQ9BTT0 268 aa11.78□□□□□ -0.52
DDX41-203ENST00000504781 MYL10Q9BUA6 226 aa11.78□□□□□ -0.52
DDX41-203ENST00000504781 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.78□□□□□ -0.52
DDX41-203ENST00000504781 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.78□□□□□ -0.52
DDX41-203ENST00000504781 CABP5Q9NP86 173 aa11.78□□□□□ -0.52
DDX41-203ENST00000504781 NYAP2Q9P242 653 aa11.78□□□□□ -0.52
DDX41-203ENST00000504781 SYNPO2Q9UMS6 1093 aa11.78□□□□□ -0.52
DDX41-203ENST00000504781 CLRN2A0PK11 232 aa11.77□□□□□ -0.53
DDX41-203ENST00000504781 VPS37CA5D8V6 355 aaPredicted RBP11.77□□□□□ -0.53
DDX41-203ENST00000504781 PALM3A6NDB9 673 aaPredicted RBP11.77□□□□□ -0.53
DDX41-203ENST00000504781 XBP1P17861 261 aa11.77□□□□□ -0.53
DDX41-203ENST00000504781 CACNB1Q02641 598 aaPredicted RBP11.77□□□□□ -0.53
DDX41-203ENST00000504781 TRIM29Q14134 588 aa11.77□□□□□ -0.53
DDX41-203ENST00000504781 GRM4Q14833 912 aa11.77□□□□□ -0.53
DDX41-203ENST00000504781 CSPP1Q1MSJ5 1256 aa11.77□□□□□ -0.53
DDX41-203ENST00000504781 RBM26Q5T8P6 1007 aaKnown RBP11.77□□□□□ -0.53
DDX41-203ENST00000504781 TMEM179Q6ZVK1 233 aa11.77□□□□□ -0.53
DDX41-203ENST00000504781 CCDC144CPQ8IYA2 1237 aa11.77□□□□□ -0.53
DDX41-203ENST00000504781 FAM177A1Q8N128 213 aaPredicted RBP11.77□□□□□ -0.53
DDX41-203ENST00000504781 CEP95Q96GE4 821 aa11.77□□□□□ -0.53
DDX41-203ENST00000504781 C8orf76Q96K31 380 aa11.77□□□□□ -0.53
DDX41-203ENST00000504781 GINM1Q9NU53 330 aa11.77□□□□□ -0.53
DDX41-203ENST00000504781 CLIP2Q9UDT6 1046 aa11.77□□□□□ -0.53
DDX41-203ENST00000504781 PGAP2Q9UHJ9 254 aa11.77□□□□□ -0.53
DDX41-203ENST00000504781 STX8Q9UNK0 236 aa11.77□□□□□ -0.53
DDX41-203ENST00000504781 SHTN1A0MZ66 631 aa11.76□□□□□ -0.53
DDX41-203ENST00000504781 FOXN1O15353 648 aa11.76□□□□□ -0.53
DDX41-203ENST00000504781 AKR1B1P15121 316 aa11.76□□□□□ -0.53
DDX41-203ENST00000504781 RXRAP19793 462 aa11.76□□□□□ -0.53
DDX41-203ENST00000504781 FUT2Q10981 343 aa11.76□□□□□ -0.53
DDX41-203ENST00000504781 ABCB5Q2M3G0 1257 aa11.76□□□□□ -0.53
DDX41-203ENST00000504781 TMTC3Q6ZXV5 915 aa11.76□□□□□ -0.53
DDX41-203ENST00000504781 RAB11FIP4Q86YS3 637 aa11.76□□□□□ -0.53
DDX41-203ENST00000504781 ALG1Q9BT22 464 aa11.76□□□□□ -0.53
DDX41-203ENST00000504781 SLC26A6Q9BXS9 759 aa11.76□□□□□ -0.53
DDX41-203ENST00000504781 ZNF408Q9H9D4 720 aa11.76□□□□□ -0.53
DDX41-203ENST00000504781 VEZTQ9HBM0 779 aa11.76□□□□□ -0.53
DDX41-203ENST00000504781 CFAP45Q9UL16 551 aa11.76□□□□□ -0.53
DDX41-203ENST00000504781 V9GY48 417 aaPredicted RBP11.76□□□□□ -0.53
DDX41-203ENST00000504781 ADAMTSL1Q8N6G6 1762 aa11.76□□□□□ -0.53
DDX41-203ENST00000504781 RASSF10A6NK89 507 aa11.75□□□□□ -0.53
DDX41-203ENST00000504781 PARP1P09874 1014 aaKnown RBP11.75□□□□□ -0.53
DDX41-203ENST00000504781 RASA3Q14644 834 aa11.75□□□□□ -0.53
DDX41-203ENST00000504781 KIF4BQ2VIQ3 1234 aa11.75□□□□□ -0.53
DDX41-203ENST00000504781 MCTP1Q6DN14 999 aa11.75□□□□□ -0.53
DDX41-203ENST00000504781 SAMD7Q7Z3H4 446 aa11.75□□□□□ -0.53
DDX41-203ENST00000504781 SRBD1Q8N5C6 995 aaKnown RBP11.75□□□□□ -0.53
DDX41-203ENST00000504781 PHKBQ93100 1093 aa11.75□□□□□ -0.53
DDX41-203ENST00000504781 GLIS2Q9BZE0 524 aaPredicted RBP11.75□□□□□ -0.53
DDX41-203ENST00000504781 DNAJC18Q9H819 358 aa11.75□□□□□ -0.53
DDX41-203ENST00000504781 KLRF2D3W0D1 207 aa11.74□□□□□ -0.53
DDX41-203ENST00000504781 MPHOSPH10O00566 681 aaKnown RBP11.74□□□□□ -0.53
DDX41-203ENST00000504781 CELF2O95319 508 aaKnown RBP11.74□□□□□ -0.53
DDX41-203ENST00000504781 SNHG28P0DPA3 235 aa11.74□□□□□ -0.53
DDX41-203ENST00000504781 HIRAP54198 1017 aaPredicted RBP11.74□□□□□ -0.53
DDX41-203ENST00000504781 NBR1Q14596 966 aa11.74□□□□□ -0.53
DDX41-203ENST00000504781 TBC1D10BQ4KMP7 808 aaPredicted RBP11.74□□□□□ -0.53
DDX41-203ENST00000504781 ASPRV1Q53RT3 343 aa11.74□□□□□ -0.53
DDX41-203ENST00000504781 FOXD4L5Q5VV16 416 aaPredicted RBP11.74□□□□□ -0.53
DDX41-203ENST00000504781 CST9Q5W186 159 aa11.74□□□□□ -0.53
DDX41-203ENST00000504781 CYP4F22Q6NT55 531 aa11.74□□□□□ -0.53
DDX41-203ENST00000504781 CDC37L1Q7L3B6 337 aa11.74□□□□□ -0.53
DDX41-203ENST00000504781 BRAPQ7Z569 592 aa11.74□□□□□ -0.53
DDX41-203ENST00000504781 APOBEC3FQ8IUX4 373 aaKnown RBP11.74□□□□□ -0.53
DDX41-203ENST00000504781 TRPM4Q8TD43 1214 aa11.74□□□□□ -0.53
DDX41-203ENST00000504781 FOXD4L4Q8WXT5 416 aaPredicted RBP11.74□□□□□ -0.53
DDX41-203ENST00000504781 SCAND2PQ9GZW5 306 aaPredicted RBP11.74□□□□□ -0.53
DDX41-203ENST00000504781 SH3GLB2Q9NR46 395 aa11.74□□□□□ -0.53
DDX41-203ENST00000504781 MAD2L2Q9UI95 211 aa11.74□□□□□ -0.53
DDX41-203ENST00000504781 PPP2R3BQ9Y5P8 575 aa11.74□□□□□ -0.53
DDX41-203ENST00000504781 MYH8P13535 1937 aa11.74□□□□□ -0.53
DDX41-203ENST00000504781 NCLP19338 710 aaKnown RBP11.73□□□□□ -0.53
DDX41-203ENST00000504781 U2AF2P26368 475 aaKnown RBP eCLIP11.73□□□□□ -0.532e-13■■□□□ 14.3
DDX41-203ENST00000504781 CAP2P40123 477 aa11.73□□□□□ -0.53
DDX41-203ENST00000504781 CTCFP49711 727 aaPredicted RBP11.73□□□□□ -0.53
DDX41-203ENST00000504781 KRT85P78386 507 aa11.73□□□□□ -0.53
DDX41-203ENST00000504781 RESTQ13127 1097 aa11.73□□□□□ -0.53
DDX41-203ENST00000504781 SAFBQ15424 915 aaKnown RBP eCLIP11.73□□□□□ -0.53
DDX41-203ENST00000504781 PKN1Q16512 942 aa11.73□□□□□ -0.53
DDX41-203ENST00000504781 GPATCH4Q5T3I0 446 aaKnown RBP11.73□□□□□ -0.53
DDX41-203ENST00000504781 KRT40Q6A162 431 aa11.73□□□□□ -0.53
DDX41-203ENST00000504781 SIAH1Q8IUQ4 282 aa11.73□□□□□ -0.53
DDX41-203ENST00000504781 CCDC82Q8N4S0 544 aa11.73□□□□□ -0.53
DDX41-203ENST00000504781 TMEM87AQ8NBN3 555 aa11.73□□□□□ -0.53
DDX41-203ENST00000504781 CAPNS2Q96L46 248 aa11.73□□□□□ -0.53
DDX41-203ENST00000504781 TEPSINQ96N21 525 aa11.73□□□□□ -0.53
DDX41-203ENST00000504781 ZNF396Q96N95 335 aaPredicted RBP11.73□□□□□ -0.53
DDX41-203ENST00000504781 SPZ1Q9BXG8 430 aa11.73□□□□□ -0.53
DDX41-203ENST00000504781 PITPNM2Q9BZ72 1349 aa11.73□□□□□ -0.53
DDX41-203ENST00000504781 TMEM39BQ9GZU3 492 aa11.73□□□□□ -0.53
DDX41-203ENST00000504781 DEFB129Q9H1M3 183 aa11.73□□□□□ -0.53
DDX41-203ENST00000504781 LMBRD1Q9NUN5 540 aa11.73□□□□□ -0.53
DDX41-203ENST00000504781 TRAK2O60296 914 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms