RNA–Protein interactions for RNA: ENST00000504557.1

HOXC9-202, Transcript of homeobox C9, humanhuman

TSL 3

Gene HOXC9, Length 581 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-202ENST00000504557 A0A0D9SFI3 127 aa17■□□□□ 0.31
HOXC9-202ENST00000504557 RASA1P20936 1047 aa17■□□□□ 0.31
HOXC9-202ENST00000504557 ERVK-9P63128 1117 aa17■□□□□ 0.31
HOXC9-202ENST00000504557 ERVK-24P63145 666 aa17■□□□□ 0.31
HOXC9-202ENST00000504557 NMIQ13287 307 aaPredicted RBP17■□□□□ 0.31
HOXC9-202ENST00000504557 Q3C1V9 767 aa17■□□□□ 0.31
HOXC9-202ENST00000504557 VPS53Q5VIR6 699 aa17■□□□□ 0.31
HOXC9-202ENST00000504557 PDE4DIPQ5VU43 2346 aa17■□□□□ 0.31
HOXC9-202ENST00000504557 ZNF444Q8N0Y2 327 aaPredicted RBP17■□□□□ 0.31
HOXC9-202ENST00000504557 MORF4L1Q9UBU8 362 aa17■□□□□ 0.31
HOXC9-202ENST00000504557 RLFQ13129 1914 aa17■□□□□ 0.31
HOXC9-202ENST00000504557 CTDSPL2Q05D32 466 aa16.99■□□□□ 0.31
HOXC9-202ENST00000504557 PPARAQ07869 468 aa16.99■□□□□ 0.31
HOXC9-202ENST00000504557 POTEEQ6S8J3 1075 aa16.99■□□□□ 0.31
HOXC9-202ENST00000504557 SIAH1Q8IUQ4 282 aa16.99■□□□□ 0.31
HOXC9-202ENST00000504557 PORCNQ9H237 461 aa16.99■□□□□ 0.31
HOXC9-202ENST00000504557 SH2D4AQ9H788 454 aa16.99■□□□□ 0.31
HOXC9-202ENST00000504557 KANSL2Q9H9L4 492 aa16.99■□□□□ 0.31
HOXC9-202ENST00000504557 ROBO3Q96MS0 1386 aa16.99■□□□□ 0.31
HOXC9-202ENST00000504557 SPDYE16A6NNV3 312 aaPredicted RBP16.98■□□□□ 0.31
HOXC9-202ENST00000504557 CYP2B6P20813 491 aa16.98■□□□□ 0.31
HOXC9-202ENST00000504557 UBXN2AP68543 259 aa16.98■□□□□ 0.31
HOXC9-202ENST00000504557 FAM47AQ5JRC9 791 aa16.98■□□□□ 0.31
HOXC9-202ENST00000504557 SLAIN1Q8ND83 568 aa16.98■□□□□ 0.31
HOXC9-202ENST00000504557 CHMP4CQ96CF2 233 aa16.98■□□□□ 0.31
HOXC9-202ENST00000504557 VCPKMTQ9H867 229 aa16.98■□□□□ 0.31
HOXC9-202ENST00000504557 HELLSQ9NRZ9 838 aa16.98■□□□□ 0.31
HOXC9-202ENST00000504557 TMX2Q9Y320 296 aa16.98■□□□□ 0.31
HOXC9-202ENST00000504557 CNMDO75829 334 aa16.97■□□□□ 0.31
HOXC9-202ENST00000504557 FLOT1O75955 427 aa16.97■□□□□ 0.31
HOXC9-202ENST00000504557 INHAP05111 366 aa16.97■□□□□ 0.31
HOXC9-202ENST00000504557 SLC3A2P08195 630 aaKnown RBP16.97■□□□□ 0.31
HOXC9-202ENST00000504557 CCL5P13501 91 aa16.97■□□□□ 0.31
HOXC9-202ENST00000504557 PDE4BQ07343 736 aa16.97■□□□□ 0.31
HOXC9-202ENST00000504557 PLS1Q14651 629 aa16.97■□□□□ 0.31
HOXC9-202ENST00000504557 MCMDC2Q4G0Z9 681 aa16.97■□□□□ 0.31
HOXC9-202ENST00000504557 GTF3C2Q8WUA4 911 aaPredicted RBP16.97■□□□□ 0.31
HOXC9-202ENST00000504557 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.97■□□□□ 0.31
HOXC9-202ENST00000504557 RNF208Q9H0X6 261 aa16.97■□□□□ 0.31
HOXC9-202ENST00000504557 ZNF287Q9HBT7 754 aa16.97■□□□□ 0.31
HOXC9-202ENST00000504557 GOPCQ9HD26 462 aa16.97■□□□□ 0.31
HOXC9-202ENST00000504557 INCENPQ9NQS7 918 aa16.97■□□□□ 0.31
HOXC9-202ENST00000504557 BTBD7Q9P203 1132 aa16.97■□□□□ 0.31
HOXC9-202ENST00000504557 ZNFX1Q9P2E3 1918 aaKnown RBP16.97■□□□□ 0.31
HOXC9-202ENST00000504557 FOXP2O15409 715 aa16.96■□□□□ 0.31
HOXC9-202ENST00000504557 TSPY3P0CV98 308 aa16.96■□□□□ 0.31
HOXC9-202ENST00000504557 TSPY8P0CW00 308 aa16.96■□□□□ 0.31
HOXC9-202ENST00000504557 COG2Q14746 738 aa16.96■□□□□ 0.31
HOXC9-202ENST00000504557 ZNF589Q86UQ0 364 aaPredicted RBP16.96■□□□□ 0.31
HOXC9-202ENST00000504557 UNC93B1Q9H1C4 597 aa16.96■□□□□ 0.31
HOXC9-202ENST00000504557 TOMM22Q9NS69 142 aa16.96■□□□□ 0.31
HOXC9-202ENST00000504557 CLIP2Q9UDT6 1046 aa16.96■□□□□ 0.31
HOXC9-202ENST00000504557 ISY1Q9ULR0 285 aaKnown RBP16.96■□□□□ 0.31
HOXC9-202ENST00000504557 RABGAP1Q9Y3P9 1069 aa16.96■□□□□ 0.31
HOXC9-202ENST00000504557 TNRC18O15417 2968 aaPredicted RBP16.96■□□□□ 0.31
HOXC9-202ENST00000504557 SDSP20132 328 aa16.95■□□□□ 0.3
HOXC9-202ENST00000504557 PDE4AP27815 886 aa16.95■□□□□ 0.3
HOXC9-202ENST00000504557 MAPK4P31152 587 aa16.95■□□□□ 0.3
HOXC9-202ENST00000504557 CCNA1P78396 465 aa16.95■□□□□ 0.3
HOXC9-202ENST00000504557 FAM83BQ5T0W9 1011 aa16.95■□□□□ 0.3
HOXC9-202ENST00000504557 CWC27Q6UX04 472 aaKnown RBP16.95■□□□□ 0.3
HOXC9-202ENST00000504557 GPR142Q7Z601 462 aa16.95■□□□□ 0.3
HOXC9-202ENST00000504557 LPAR1Q92633 364 aa16.95■□□□□ 0.3
HOXC9-202ENST00000504557 NUP88Q99567 741 aaPredicted RBP16.95■□□□□ 0.3
HOXC9-202ENST00000504557 NUDT12Q9BQG2 462 aa16.95■□□□□ 0.3
HOXC9-202ENST00000504557 DIAPH3Q9NSV4 1193 aa16.95■□□□□ 0.3
HOXC9-202ENST00000504557 A0A0G2JMZ2 1700 aa16.95■□□□□ 0.3
HOXC9-202ENST00000504557 WDR46O15213 610 aaKnown RBP16.94■□□□□ 0.3
HOXC9-202ENST00000504557 HAND2P61296 217 aa16.94■□□□□ 0.3
HOXC9-202ENST00000504557 TFAP4Q01664 338 aa16.94■□□□□ 0.3
HOXC9-202ENST00000504557 TRIM32Q13049 653 aa16.94■□□□□ 0.3
HOXC9-202ENST00000504557 IRF5Q13568 498 aa16.94■□□□□ 0.3
HOXC9-202ENST00000504557 RRP12Q5JTH9 1297 aaKnown RBP16.94■□□□□ 0.3
HOXC9-202ENST00000504557 PLEKHH3Q7Z736 793 aa16.94■□□□□ 0.3
HOXC9-202ENST00000504557 LRRC47Q8N1G4 583 aaKnown RBP16.94■□□□□ 0.3
HOXC9-202ENST00000504557 ATG4CQ96DT6 458 aa16.94■□□□□ 0.3
HOXC9-202ENST00000504557 CEP95Q96GE4 821 aa16.94■□□□□ 0.3
HOXC9-202ENST00000504557 OSBPL3Q9H4L5 887 aa16.94■□□□□ 0.3
HOXC9-202ENST00000504557 FBXO28Q9NVF7 368 aa16.94■□□□□ 0.3
HOXC9-202ENST00000504557 HOXC10Q9NYD6 342 aa16.94■□□□□ 0.3
HOXC9-202ENST00000504557 GJD2Q9UKL4 321 aa16.94■□□□□ 0.3
HOXC9-202ENST00000504557 CCDC171Q6TFL3 1326 aa16.94■□□□□ 0.3
HOXC9-202ENST00000504557 RANBP6O60518 1105 aaKnown RBP16.93■□□□□ 0.3
HOXC9-202ENST00000504557 PXYLP1Q8TE99 480 aa16.93■□□□□ 0.3
HOXC9-202ENST00000504557 MTMR7Q9Y216 660 aa16.93■□□□□ 0.3
HOXC9-202ENST00000504557 IVNS1ABPQ9Y6Y0 642 aa16.93■□□□□ 0.3
HOXC9-202ENST00000504557 BRCA2P51587 3418 aa16.92■□□□□ 0.3
HOXC9-202ENST00000504557 TSPY2A6NKD2 308 aa16.92■□□□□ 0.3
HOXC9-202ENST00000504557 HSPD1P10809 573 aaKnown RBP16.92■□□□□ 0.3
HOXC9-202ENST00000504557 DSG3P32926 999 aa16.92■□□□□ 0.3
HOXC9-202ENST00000504557 SLC4A3P48751 1232 aa16.92■□□□□ 0.3
HOXC9-202ENST00000504557 SOCS4Q8WXH5 440 aa16.92■□□□□ 0.3
HOXC9-202ENST00000504557 TRIB2Q92519 343 aa16.92■□□□□ 0.3
HOXC9-202ENST00000504557 NYAP2Q9P242 653 aa16.92■□□□□ 0.3
HOXC9-202ENST00000504557 LAMA4Q16363 1823 aa16.91■□□□□ 0.3
HOXC9-202ENST00000504557 F5H6K3 240 aa16.91■□□□□ 0.3
HOXC9-202ENST00000504557 NMT2O60551 498 aa16.91■□□□□ 0.3
HOXC9-202ENST00000504557 NDUFB10O96000 172 aa16.91■□□□□ 0.3
HOXC9-202ENST00000504557 FGAP02671 866 aa16.91■□□□□ 0.3
HOXC9-202ENST00000504557 HMGCRP04035 888 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms