RNA–Protein interactions for RNA: ENST00000504466.1

HMGCR-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

TSL 2

Gene HMGCR, Length 1,107 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-204ENST00000504466 PIDD1Q9HB75 910 aa7.23□□□□□ -1.25
HMGCR-204ENST00000504466 METTL5Q9NRN9 209 aaKnown RBP7.23□□□□□ -1.25
HMGCR-204ENST00000504466 PPP4R2Q9NY27 417 aa7.23□□□□□ -1.25
HMGCR-204ENST00000504466 FAM8A1Q9UBU6 413 aa7.23□□□□□ -1.25
HMGCR-204ENST00000504466 IFT172Q9UG01 1749 aa7.23□□□□□ -1.25
HMGCR-204ENST00000504466 PIK3C2BO00750 1634 aa7.23□□□□□ -1.25
HMGCR-204ENST00000504466 LAMC1P11047 1609 aa7.23□□□□□ -1.25
HMGCR-204ENST00000504466 USP47Q96K76 1375 aa7.22□□□□□ -1.25
HMGCR-204ENST00000504466 CCDC7Q96M83 1385 aa7.22□□□□□ -1.25
HMGCR-204ENST00000504466 SYNMO15061 1565 aa7.22□□□□□ -1.25
HMGCR-204ENST00000504466 CNTLNQ9NXG0 1405 aa7.22□□□□□ -1.25
HMGCR-204ENST00000504466 CTSHP09668 335 aa7.22□□□□□ -1.25
HMGCR-204ENST00000504466 FCGRTP55899 365 aa7.22□□□□□ -1.25
HMGCR-204ENST00000504466 FZD5Q13467 585 aa7.22□□□□□ -1.25
HMGCR-204ENST00000504466 TTLL4Q14679 1199 aa7.22□□□□□ -1.25
HMGCR-204ENST00000504466 ZC3H12AQ5D1E8 599 aaKnown RBP7.22□□□□□ -1.25
HMGCR-204ENST00000504466 NXPE4Q6UWF7 544 aa7.22□□□□□ -1.25
HMGCR-204ENST00000504466 BCO2Q9BYV7 579 aa7.22□□□□□ -1.25
HMGCR-204ENST00000504466 VAV3Q9UKW4 847 aa7.22□□□□□ -1.25
HMGCR-204ENST00000504466 PCOLCE2Q9UKZ9 415 aa7.22□□□□□ -1.25
HMGCR-204ENST00000504466 WASHC2CQ9Y4E1 1318 aa7.22□□□□□ -1.25
HMGCR-204ENST00000504466 ARHGEF40Q8TER5 1519 aa7.22□□□□□ -1.25
HMGCR-204ENST00000504466 NEFMP07197 916 aa7.21□□□□□ -1.26
HMGCR-204ENST00000504466 FUT4P22083 530 aa7.21□□□□□ -1.26
HMGCR-204ENST00000504466 ARNTP27540 789 aa7.21□□□□□ -1.26
HMGCR-204ENST00000504466 ERVK-24P63145 666 aa7.21□□□□□ -1.26
HMGCR-204ENST00000504466 HDLBPQ00341 1268 aaKnown RBP7.21□□□□□ -1.26
HMGCR-204ENST00000504466 FANCCQ00597 558 aa7.21□□□□□ -1.26
HMGCR-204ENST00000504466 PRKCQQ04759 706 aa7.21□□□□□ -1.26
HMGCR-204ENST00000504466 ZNF252P-AS1Q0IIN9 211 aa7.21□□□□□ -1.26
HMGCR-204ENST00000504466 ZNF792Q3KQV3 632 aa7.21□□□□□ -1.26
HMGCR-204ENST00000504466 PLD6Q8N2A8 252 aaKnown RBP7.21□□□□□ -1.26
HMGCR-204ENST00000504466 STK35Q8TDR2 534 aa7.21□□□□□ -1.26
HMGCR-204ENST00000504466 RNF34Q969K3 372 aa7.21□□□□□ -1.26
HMGCR-204ENST00000504466 DUSP23Q9BVJ7 150 aa7.21□□□□□ -1.26
HMGCR-204ENST00000504466 U3KQE9 123 aa7.21□□□□□ -1.26
HMGCR-204ENST00000504466 NRXN1Q9ULB1 1477 aa7.21□□□□□ -1.26
HMGCR-204ENST00000504466 KIF7Q2M1P5 1343 aa7.21□□□□□ -1.26
HMGCR-204ENST00000504466 ADGRB3O60242 1522 aa7.21□□□□□ -1.26
HMGCR-204ENST00000504466 USP17L7P0C7H9 530 aa7.2□□□□□ -1.26
HMGCR-204ENST00000504466 ERCC5P28715 1186 aaPredicted RBP7.2□□□□□ -1.26
HMGCR-204ENST00000504466 ZNF76P36508 570 aa7.2□□□□□ -1.26
HMGCR-204ENST00000504466 OXCT1P55809 520 aa7.2□□□□□ -1.26
HMGCR-204ENST00000504466 SULF2Q8IWU5 870 aa7.2□□□□□ -1.26
HMGCR-204ENST00000504466 RNF214Q8ND24 703 aa7.2□□□□□ -1.26
HMGCR-204ENST00000504466 C3orf58Q8NDZ4 430 aa7.2□□□□□ -1.26
HMGCR-204ENST00000504466 CARD11Q9BXL7 1154 aa7.2□□□□□ -1.26
HMGCR-204ENST00000504466 GPN3Q9UHW5 284 aaPredicted RBP7.2□□□□□ -1.26
HMGCR-204ENST00000504466 PREX1Q8TCU6 1659 aa7.19□□□□□ -1.26
HMGCR-204ENST00000504466 MYOM2P54296 1465 aa7.19□□□□□ -1.26
HMGCR-204ENST00000504466 KIAA1210Q9ULL0 1709 aa7.19□□□□□ -1.26
HMGCR-204ENST00000504466 PPLO60437 1756 aa7.19□□□□□ -1.26
HMGCR-204ENST00000504466 LEFTY1O75610 366 aa7.19□□□□□ -1.26
HMGCR-204ENST00000504466 CD8BP10966 210 aa7.19□□□□□ -1.26
HMGCR-204ENST00000504466 HCLS1P14317 486 aaPredicted RBP7.19□□□□□ -1.26
HMGCR-204ENST00000504466 NME2P22392 152 aa7.19□□□□□ -1.26
HMGCR-204ENST00000504466 GSTT1P30711 240 aa7.19□□□□□ -1.26
HMGCR-204ENST00000504466 BNIP3Q12983 259 aa7.19□□□□□ -1.26
HMGCR-204ENST00000504466 PLCL1Q15111 1095 aa7.19□□□□□ -1.26
HMGCR-204ENST00000504466 C9orf131Q5VYM1 1079 aa7.19□□□□□ -1.26
HMGCR-204ENST00000504466 FAM214BQ7L5A3 538 aa7.19□□□□□ -1.26
HMGCR-204ENST00000504466 ATG4DQ86TL0 474 aaPredicted RBP7.19□□□□□ -1.26
HMGCR-204ENST00000504466 FAM181AQ8N9Y4 354 aa7.19□□□□□ -1.26
HMGCR-204ENST00000504466 KCNB2Q92953 911 aa7.19□□□□□ -1.26
HMGCR-204ENST00000504466 ISL2Q96A47 359 aa7.19□□□□□ -1.26
HMGCR-204ENST00000504466 EMILIN2Q9BXX0 1053 aa7.19□□□□□ -1.26
HMGCR-204ENST00000504466 ROCK2O75116 1388 aaKnown RBP7.19□□□□□ -1.26
HMGCR-204ENST00000504466 ST20-MTHFSA0A0A6YYL1 179 aa7.18□□□□□ -1.26
HMGCR-204ENST00000504466 BIN1O00499 593 aa7.18□□□□□ -1.26
HMGCR-204ENST00000504466 C8AP07357 584 aa7.18□□□□□ -1.26
HMGCR-204ENST00000504466 ZC3H6P61129 1189 aaKnown RBP7.18□□□□□ -1.26
HMGCR-204ENST00000504466 JAG1P78504 1218 aa7.18□□□□□ -1.26
HMGCR-204ENST00000504466 TAF1CQ15572 869 aaPredicted RBP7.18□□□□□ -1.26
HMGCR-204ENST00000504466 IFI16Q16666 785 aaKnown RBP7.18□□□□□ -1.26
HMGCR-204ENST00000504466 METTL16Q86W50 562 aaKnown RBP7.18□□□□□ -1.26
HMGCR-204ENST00000504466 ANKRD24Q8TF21 1146 aa7.18□□□□□ -1.26
HMGCR-204ENST00000504466 C8orf37Q96NL8 207 aa7.18□□□□□ -1.26
HMGCR-204ENST00000504466 TNKS2Q9H2K2 1166 aa7.18□□□□□ -1.26
HMGCR-204ENST00000504466 PLAGL2Q9UPG8 496 aa7.18□□□□□ -1.26
HMGCR-204ENST00000504466 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.18□□□□□ -1.26
HMGCR-204ENST00000504466 ADGRF5Q8IZF2 1346 aa7.18□□□□□ -1.26
HMGCR-204ENST00000504466 IQGAP1P46940 1657 aa7.18□□□□□ -1.26
HMGCR-204ENST00000504466 USP31Q70CQ4 1352 aa7.18□□□□□ -1.26
HMGCR-204ENST00000504466 CLTCQ00610 1675 aaKnown RBP7.17□□□□□ -1.26
HMGCR-204ENST00000504466 RNGTTO60942 597 aaKnown RBP7.17□□□□□ -1.26
HMGCR-204ENST00000504466 CEACAM5P06731 702 aa7.17□□□□□ -1.26
HMGCR-204ENST00000504466 NTF4P34130 210 aa7.17□□□□□ -1.26
HMGCR-204ENST00000504466 ST13P50502 369 aaKnown RBP7.17□□□□□ -1.26
HMGCR-204ENST00000504466 RING1Q06587 406 aa7.17□□□□□ -1.26
HMGCR-204ENST00000504466 IDI1Q13907 227 aa7.17□□□□□ -1.26
HMGCR-204ENST00000504466 NT5DC4Q86YG4 428 aa7.17□□□□□ -1.26
HMGCR-204ENST00000504466 NECAB3Q96P71 396 aaPredicted RBP7.17□□□□□ -1.26
HMGCR-204ENST00000504466 TESK2Q96S53 571 aa7.17□□□□□ -1.26
HMGCR-204ENST00000504466 MBNL3Q9NUK0 354 aaKnown RBP7.17□□□□□ -1.26
HMGCR-204ENST00000504466 ARID4BQ4LE39 1312 aaPredicted RBP7.17□□□□□ -1.26
HMGCR-204ENST00000504466 MYO5BQ9ULV0 1848 aa7.17□□□□□ -1.26
HMGCR-204ENST00000504466 TMEM131LA2VDJ0 1609 aa7.16□□□□□ -1.26
HMGCR-204ENST00000504466 ARID1BQ8NFD5 2236 aaPredicted RBP7.16□□□□□ -1.26
HMGCR-204ENST00000504466 TMEM265A0A087WTH1 108 aa7.16□□□□□ -1.26
HMGCR-204ENST00000504466 RNASE1P07998 156 aaKnown RBP7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms