RNA–Protein interactions for RNA: ENST00000504318.5

PDLIM7-211, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-211ENST00000504318 RASA1P20936 1047 aa16.8■□□□□ 0.28
PDLIM7-211ENST00000504318 MAPK4P31152 587 aa16.8■□□□□ 0.28
PDLIM7-211ENST00000504318 SMC5Q8IY18 1101 aa16.8■□□□□ 0.28
PDLIM7-211ENST00000504318 U2AF1L4Q8WU68 220 aaKnown RBP16.8■□□□□ 0.28
PDLIM7-211ENST00000504318 GCC1Q96CN9 775 aa16.8■□□□□ 0.28
PDLIM7-211ENST00000504318 PAGR1Q9BTK6 254 aa16.8■□□□□ 0.28
PDLIM7-211ENST00000504318 CRISPLD2Q9H0B8 497 aa16.8■□□□□ 0.28
PDLIM7-211ENST00000504318 MYH4Q9Y623 1939 aa16.79■□□□□ 0.28
PDLIM7-211ENST00000504318 SGPL1O95470 568 aa16.79■□□□□ 0.28
PDLIM7-211ENST00000504318 HMGCRP04035 888 aa16.79■□□□□ 0.28
PDLIM7-211ENST00000504318 PDE1AP54750 535 aa16.79■□□□□ 0.28
PDLIM7-211ENST00000504318 ICA1Q05084 483 aa16.79■□□□□ 0.28
PDLIM7-211ENST00000504318 AAMPQ13685 434 aa16.79■□□□□ 0.28
PDLIM7-211ENST00000504318 NKX2-3Q8TAU0 364 aa16.79■□□□□ 0.28
PDLIM7-211ENST00000504318 VCPKMTQ9H867 229 aa16.79■□□□□ 0.28
PDLIM7-211ENST00000504318 FRMPD3Q5JV73 1810 aa16.79■□□□□ 0.28
PDLIM7-211ENST00000504318 CEP290O15078 2479 aa16.78■□□□□ 0.28
PDLIM7-211ENST00000504318 IGHDP01880 384 aa16.78■□□□□ 0.28
PDLIM7-211ENST00000504318 EEF2P13639 858 aaKnown RBP16.78■□□□□ 0.28
PDLIM7-211ENST00000504318 MNX1P50219 401 aaPredicted RBP16.78■□□□□ 0.28
PDLIM7-211ENST00000504318 ANKRD45Q5TZF3 282 aa16.78■□□□□ 0.28
PDLIM7-211ENST00000504318 SOCS4Q8WXH5 440 aa16.78■□□□□ 0.28
PDLIM7-211ENST00000504318 LPAR1Q92633 364 aa16.78■□□□□ 0.28
PDLIM7-211ENST00000504318 ADAMTS5Q9UNA0 930 aa16.78■□□□□ 0.28
PDLIM7-211ENST00000504318 PATL2C9JE40 543 aaKnown RBP16.77■□□□□ 0.28
PDLIM7-211ENST00000504318 CYP2B6P20813 491 aa16.77■□□□□ 0.28
PDLIM7-211ENST00000504318 CCL14Q16627 93 aa16.77■□□□□ 0.28
PDLIM7-211ENST00000504318 PLEKHH3Q7Z736 793 aa16.77■□□□□ 0.28
PDLIM7-211ENST00000504318 IFNL3Q8IZI9 196 aa16.77■□□□□ 0.28
PDLIM7-211ENST00000504318 EXOC6Q8TAG9 804 aa16.77■□□□□ 0.28
PDLIM7-211ENST00000504318 NUDT12Q9BQG2 462 aa16.77■□□□□ 0.28
PDLIM7-211ENST00000504318 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.77■□□□□ 0.288e-9■■■■□ 19.6
PDLIM7-211ENST00000504318 BIN2Q9UBW5 565 aaPredicted RBP16.77■□□□□ 0.28
PDLIM7-211ENST00000504318 TACC3Q9Y6A5 838 aa16.77■□□□□ 0.28
PDLIM7-211ENST00000504318 PLIN4Q96Q06 1357 aa16.77■□□□□ 0.27
PDLIM7-211ENST00000504318 SLC34A2O95436 690 aa16.76■□□□□ 0.27
PDLIM7-211ENST00000504318 GNAT2P19087 354 aa16.76■□□□□ 0.27
PDLIM7-211ENST00000504318 DSG3P32926 999 aa16.76■□□□□ 0.27
PDLIM7-211ENST00000504318 GRB14Q14449 540 aa16.76■□□□□ 0.27
PDLIM7-211ENST00000504318 COG2Q14746 738 aa16.76■□□□□ 0.27
PDLIM7-211ENST00000504318 SPICE1Q8N0Z3 855 aa16.76■□□□□ 0.27
PDLIM7-211ENST00000504318 DEFB118Q96PH6 123 aa16.76■□□□□ 0.27
PDLIM7-211ENST00000504318 FSD1Q9BTV5 496 aa16.76■□□□□ 0.27
PDLIM7-211ENST00000504318 KANSL2Q9H9L4 492 aa16.76■□□□□ 0.27
PDLIM7-211ENST00000504318 FLRT1Q9NZU1 646 aa16.76■□□□□ 0.27
PDLIM7-211ENST00000504318 ZNFX1Q9P2E3 1918 aaKnown RBP16.76■□□□□ 0.27
PDLIM7-211ENST00000504318 RPTORQ8N122 1335 aa16.75■□□□□ 0.27
PDLIM7-211ENST00000504318 WDR46O15213 610 aaKnown RBP16.75■□□□□ 0.27
PDLIM7-211ENST00000504318 HOXC6P09630 235 aa16.75■□□□□ 0.27
PDLIM7-211ENST00000504318 PTPREP23469 700 aa16.75■□□□□ 0.27
PDLIM7-211ENST00000504318 MAP2K5Q13163 448 aa16.75■□□□□ 0.27
PDLIM7-211ENST00000504318 CCDC129Q6ZRS4 1044 aa16.75■□□□□ 0.27
PDLIM7-211ENST00000504318 AMOTL1Q8IY63 956 aa16.75■□□□□ 0.27
PDLIM7-211ENST00000504318 REPS2Q8NFH8 660 aa16.75■□□□□ 0.27
PDLIM7-211ENST00000504318 DDRGK1Q96HY6 314 aa16.75■□□□□ 0.27
PDLIM7-211ENST00000504318 APBA2Q99767 749 aa16.75■□□□□ 0.27
PDLIM7-211ENST00000504318 MOV10L1Q9BXT6 1211 aaKnown RBP16.75■□□□□ 0.27
PDLIM7-211ENST00000504318 ARHGEF10LQ9HCE6 1279 aa16.75■□□□□ 0.27
PDLIM7-211ENST00000504318 CACNB2Q08289 660 aaPredicted RBP16.74■□□□□ 0.27
PDLIM7-211ENST00000504318 ATG4CQ96DT6 458 aa16.74■□□□□ 0.27
PDLIM7-211ENST00000504318 SPATC1LQ9H0A9 340 aa16.74■□□□□ 0.27
PDLIM7-211ENST00000504318 HOXC10Q9NYD6 342 aa16.74■□□□□ 0.27
PDLIM7-211ENST00000504318 NYAP2Q9P242 653 aa16.74■□□□□ 0.27
PDLIM7-211ENST00000504318 RANBP2P49792 3224 aaKnown RBP16.73■□□□□ 0.27
PDLIM7-211ENST00000504318 SLC15A5A6NIM6 579 aa16.73■□□□□ 0.27
PDLIM7-211ENST00000504318 MINDY4BA8MYZ0 360 aa16.73■□□□□ 0.27
PDLIM7-211ENST00000504318 FARP2O94887 1054 aaPredicted RBP16.73■□□□□ 0.27
PDLIM7-211ENST00000504318 PRKAR2AP13861 404 aaKnown RBP16.73■□□□□ 0.27
PDLIM7-211ENST00000504318 CAPN2P17655 700 aa16.73■□□□□ 0.27
PDLIM7-211ENST00000504318 RGS2P41220 211 aa16.73■□□□□ 0.27
PDLIM7-211ENST00000504318 VPS53Q5VIR6 699 aa16.73■□□□□ 0.27
PDLIM7-211ENST00000504318 SHCBP1Q8NEM2 672 aa16.73■□□□□ 0.27
PDLIM7-211ENST00000504318 NPLOC4Q8TAT6 608 aa16.73■□□□□ 0.27
PDLIM7-211ENST00000504318 DIS3LQ8TF46 1054 aaKnown RBP16.73■□□□□ 0.27
PDLIM7-211ENST00000504318 EVI5LQ96CN4 794 aa16.73■□□□□ 0.27
PDLIM7-211ENST00000504318 TANGO6Q9C0B7 1094 aa16.73■□□□□ 0.27
PDLIM7-211ENST00000504318 LNPKQ9C0E8 428 aa16.73■□□□□ 0.27
PDLIM7-211ENST00000504318 FBXO28Q9NVF7 368 aa16.73■□□□□ 0.27
PDLIM7-211ENST00000504318 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.73■□□□□ 0.27
PDLIM7-211ENST00000504318 PRDM1O75626 825 aa16.72■□□□□ 0.27
PDLIM7-211ENST00000504318 TDO2P48775 406 aa16.72■□□□□ 0.27
PDLIM7-211ENST00000504318 CCNA1P78396 465 aa16.72■□□□□ 0.27
PDLIM7-211ENST00000504318 TMEM132BQ14DG7 1078 aa16.72■□□□□ 0.27
PDLIM7-211ENST00000504318 LRRFIP1Q32MZ4 808 aaKnown RBP16.72■□□□□ 0.27
PDLIM7-211ENST00000504318 LHX8Q68G74 356 aa16.72■□□□□ 0.27
PDLIM7-211ENST00000504318 PLEKHM2Q8IWE5 1019 aa16.72■□□□□ 0.27
PDLIM7-211ENST00000504318 STK11IPQ8N1F8 1099 aa16.72■□□□□ 0.27
PDLIM7-211ENST00000504318 MB21D1Q8N884 522 aa16.72■□□□□ 0.27
PDLIM7-211ENST00000504318 MKL1Q969V6 931 aa16.72■□□□□ 0.27
PDLIM7-211ENST00000504318 OSBPL3Q9H4L5 887 aa16.72■□□□□ 0.27
PDLIM7-211ENST00000504318 SH2D4AQ9H788 454 aa16.72■□□□□ 0.27
PDLIM7-211ENST00000504318 OGDHLQ9ULD0 1010 aa16.72■□□□□ 0.27
PDLIM7-211ENST00000504318 A0A0D9SFI3 127 aa16.71■□□□□ 0.27
PDLIM7-211ENST00000504318 FLOT1O75955 427 aa16.71■□□□□ 0.27
PDLIM7-211ENST00000504318 ERCC3P19447 782 aa16.71■□□□□ 0.27
PDLIM7-211ENST00000504318 CCND3P30281 292 aaPredicted RBP16.71■□□□□ 0.27
PDLIM7-211ENST00000504318 NUCB1Q02818 461 aa16.71■□□□□ 0.27
PDLIM7-211ENST00000504318 PPARAQ07869 468 aa16.71■□□□□ 0.27
PDLIM7-211ENST00000504318 TICAM2Q86XR7 235 aa16.71■□□□□ 0.27
PDLIM7-211ENST00000504318 TRMT44Q8IYL2 757 aaKnown RBP16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms