RNA–Protein interactions for RNA: ENST00000504044.1

NFKB1-204, Transcript of nuclear factor kappa B subunit 1, humanhuman

TSL 2

Gene NFKB1, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-204ENST00000504044 ERVK-24P63145 666 aa21.31■■□□□ 1
NFKB1-204ENST00000504044 LBX2Q6XYB7 198 aa21.31■■□□□ 1
NFKB1-204ENST00000504044 PXYLP1Q8TE99 480 aa21.31■■□□□ 1
NFKB1-204ENST00000504044 SOCS4Q8WXH5 440 aa21.31■■□□□ 1
NFKB1-204ENST00000504044 RAD21O60216 631 aa21.3■■□□□ 1
NFKB1-204ENST00000504044 SDSP20132 328 aa21.3■■□□□ 1
NFKB1-204ENST00000504044 CCDC129Q6ZRS4 1044 aa21.3■■□□□ 1
NFKB1-204ENST00000504044 MB21D1Q8N884 522 aa21.3■■□□□ 1
NFKB1-204ENST00000504044 SH3TC2Q8TF17 1288 aa21.3■■□□□ 1
NFKB1-204ENST00000504044 NYAP2Q9P242 653 aa21.3■■□□□ 1
NFKB1-204ENST00000504044 ADCY3O60266 1144 aa21.29■■□□□ 1
NFKB1-204ENST00000504044 NMIQ13287 307 aaPredicted RBP21.29■■□□□ 1
NFKB1-204ENST00000504044 ALX1Q15699 326 aa21.29■■□□□ 1
NFKB1-204ENST00000504044 NKX2-3Q8TAU0 364 aa21.29■■□□□ 1
NFKB1-204ENST00000504044 FAM227BQ96M60 508 aa21.29■■□□□ 1
NFKB1-204ENST00000504044 NUDT12Q9BQG2 462 aa21.29■■□□□ 1
NFKB1-204ENST00000504044 RBPJLQ9UBG7 517 aa21.29■■□□□ 1
NFKB1-204ENST00000504044 SYNPO2Q9UMS6 1093 aa21.29■■□□□ 1
NFKB1-204ENST00000504044 CCDC171Q6TFL3 1326 aa21.29■■□□□ 1
NFKB1-204ENST00000504044 A0A0D9SFI3 127 aa21.28■■□□□ 1
NFKB1-204ENST00000504044 FLOT1O75955 427 aa21.28■■□□□ 1
NFKB1-204ENST00000504044 TRMT44Q8IYL2 757 aaKnown RBP21.28■■□□□ 1
NFKB1-204ENST00000504044 GABRQQ9UN88 632 aa21.28■■□□□ 1
NFKB1-204ENST00000504044 IVNS1ABPQ9Y6Y0 642 aa21.28■■□□□ 1
NFKB1-204ENST00000504044 TSPY2A6NKD2 308 aa21.27■■□□□ 1
NFKB1-204ENST00000504044 SPDYE16A6NNV3 312 aaPredicted RBP21.27■■□□□ 1
NFKB1-204ENST00000504044 SMIM22K7EJ46 135 aa21.27■■□□□ 1
NFKB1-204ENST00000504044 PRDM1O75626 825 aa21.27■■□□□ 1
NFKB1-204ENST00000504044 TTLL1O95922 423 aa21.27■■□□□ 1
NFKB1-204ENST00000504044 SPICE1Q8N0Z3 855 aa21.27■■□□□ 1
NFKB1-204ENST00000504044 TXNRD2Q9NNW7 524 aa21.27■■□□□ 1
NFKB1-204ENST00000504044 BAZ2AQ9UIF9 1905 aaKnown RBP21.27■■□□□ 1
NFKB1-204ENST00000504044 ZMYM6O95789 1325 aa21.27■□□□□ 0.99
NFKB1-204ENST00000504044 HSPD1P10809 573 aaKnown RBP21.26■□□□□ 0.99
NFKB1-204ENST00000504044 CAPN2P17655 700 aa21.26■□□□□ 0.99
NFKB1-204ENST00000504044 WDR78Q5VTH9 848 aa21.26■□□□□ 0.99
NFKB1-204ENST00000504044 PLEKHH3Q7Z736 793 aa21.26■□□□□ 0.99
NFKB1-204ENST00000504044 CLEC10AQ8IUN9 316 aa21.26■□□□□ 0.99
NFKB1-204ENST00000504044 NEDD1Q8NHV4 660 aa21.26■□□□□ 0.99
NFKB1-204ENST00000504044 ANAPC4Q9UJX5 808 aa21.26■□□□□ 0.99
NFKB1-204ENST00000504044 PCP11498 1178 aaKnown RBP21.25■□□□□ 0.99
NFKB1-204ENST00000504044 DSG3P32926 999 aa21.25■□□□□ 0.99
NFKB1-204ENST00000504044 NT5C2P49902 561 aa21.25■□□□□ 0.99
NFKB1-204ENST00000504044 TFAP4Q01664 338 aa21.25■□□□□ 0.99
NFKB1-204ENST00000504044 SIAH1Q8IUQ4 282 aa21.25■□□□□ 0.99
NFKB1-204ENST00000504044 TOMM22Q9NS69 142 aa21.25■□□□□ 0.99
NFKB1-204ENST00000504044 CLIP2Q9UDT6 1046 aa21.25■□□□□ 0.99
NFKB1-204ENST00000504044 PLIN4Q96Q06 1357 aa21.24■□□□□ 0.99
NFKB1-204ENST00000504044 MYCP01106 439 aaPredicted RBP21.24■□□□□ 0.99
NFKB1-204ENST00000504044 RGS2P41220 211 aa21.24■□□□□ 0.99
NFKB1-204ENST00000504044 TTC22Q5TAA0 569 aa21.24■□□□□ 0.99
NFKB1-204ENST00000504044 CWC27Q6UX04 472 aaKnown RBP21.24■□□□□ 0.99
NFKB1-204ENST00000504044 GPR142Q7Z601 462 aa21.24■□□□□ 0.99
NFKB1-204ENST00000504044 RUFY2Q8WXA3 655 aa21.24■□□□□ 0.99
NFKB1-204ENST00000504044 RNF208Q9H0X6 261 aa21.24■□□□□ 0.99
NFKB1-204ENST00000504044 RNF41Q9H4P4 317 aaPredicted RBP21.24■□□□□ 0.99
NFKB1-204ENST00000504044 MTMR4Q9NYA4 1195 aa21.24■□□□□ 0.99
NFKB1-204ENST00000504044 FGAP02671 866 aa21.23■□□□□ 0.99
NFKB1-204ENST00000504044 HMGCRP04035 888 aa21.23■□□□□ 0.99
NFKB1-204ENST00000504044 XRCC5P13010 732 aaKnown RBP21.23■□□□□ 0.99
NFKB1-204ENST00000504044 Q3C1V9 767 aa21.23■□□□□ 0.99
NFKB1-204ENST00000504044 VPS53Q5VIR6 699 aa21.23■□□□□ 0.99
NFKB1-204ENST00000504044 SAMD1Q6SPF0 538 aaPredicted RBP21.23■□□□□ 0.99
NFKB1-204ENST00000504044 CEP95Q96GE4 821 aa21.23■□□□□ 0.99
NFKB1-204ENST00000504044 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.23■□□□□ 0.99
NFKB1-204ENST00000504044 CTDP1Q9Y5B0 961 aaPredicted RBP21.23■□□□□ 0.99
NFKB1-204ENST00000504044 IGKV6D-41A0A0C4DH26 115 aa21.22■□□□□ 0.99
NFKB1-204ENST00000504044 F5H6K3 240 aa21.22■□□□□ 0.99
NFKB1-204ENST00000504044 RANBP6O60518 1105 aaKnown RBP21.22■□□□□ 0.99
NFKB1-204ENST00000504044 INHAP05111 366 aa21.22■□□□□ 0.99
NFKB1-204ENST00000504044 COPB2P35606 906 aa21.22■□□□□ 0.99
NFKB1-204ENST00000504044 CTDSPL2Q05D32 466 aa21.22■□□□□ 0.99
NFKB1-204ENST00000504044 KLRC3Q07444 240 aa21.22■□□□□ 0.99
NFKB1-204ENST00000504044 PLS1Q14651 629 aa21.22■□□□□ 0.99
NFKB1-204ENST00000504044 ZNF589Q86UQ0 364 aaPredicted RBP21.22■□□□□ 0.99
NFKB1-204ENST00000504044 SHCBP1Q8NEM2 672 aa21.22■□□□□ 0.99
NFKB1-204ENST00000504044 MKL1Q969V6 931 aa21.22■□□□□ 0.99
NFKB1-204ENST00000504044 SLC5A4Q9NY91 659 aa21.22■□□□□ 0.99
NFKB1-204ENST00000504044 CTNNA3Q9UI47 895 aa21.22■□□□□ 0.99
NFKB1-204ENST00000504044 MYH8P13535 1937 aa21.21■□□□□ 0.99
NFKB1-204ENST00000504044 POTEFA5A3E0 1075 aa21.21■□□□□ 0.99
NFKB1-204ENST00000504044 SLC15A5A6NIM6 579 aa21.21■□□□□ 0.99
NFKB1-204ENST00000504044 FOXP2O15409 715 aa21.21■□□□□ 0.99
NFKB1-204ENST00000504044 STRNO43815 780 aa21.21■□□□□ 0.99
NFKB1-204ENST00000504044 ORC4O43929 436 aa21.21■□□□□ 0.99
NFKB1-204ENST00000504044 CNMDO75829 334 aa21.21■□□□□ 0.99
NFKB1-204ENST00000504044 CCL5P13501 91 aa21.21■□□□□ 0.99
NFKB1-204ENST00000504044 ELNP15502 786 aa21.21■□□□□ 0.99
NFKB1-204ENST00000504044 CYP2B6P20813 491 aa21.21■□□□□ 0.99
NFKB1-204ENST00000504044 FAM47AQ5JRC9 791 aa21.21■□□□□ 0.99
NFKB1-204ENST00000504044 FAM83BQ5T0W9 1011 aa21.21■□□□□ 0.99
NFKB1-204ENST00000504044 GMCL1P1Q8NEA9 526 aa21.21■□□□□ 0.99
NFKB1-204ENST00000504044 APBA2Q99767 749 aa21.21■□□□□ 0.99
NFKB1-204ENST00000504044 SPATC1LQ9H0A9 340 aa21.21■□□□□ 0.99
NFKB1-204ENST00000504044 PORCNQ9H237 461 aa21.21■□□□□ 0.99
NFKB1-204ENST00000504044 MROH8Q9H579 483 aa21.21■□□□□ 0.99
NFKB1-204ENST00000504044 BTBD7Q9P203 1132 aa21.21■□□□□ 0.99
NFKB1-204ENST00000504044 GJD2Q9UKL4 321 aa21.21■□□□□ 0.99
NFKB1-204ENST00000504044 STX8Q9UNK0 236 aa21.21■□□□□ 0.99
NFKB1-204ENST00000504044 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.21■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms