RNA–Protein interactions for RNA: ENST00000503827.5

PDLIM7-210, Transcript of PDZ and LIM domain 7, humanhuman

TSL 5

Gene PDLIM7, Length 451 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-210ENST00000503827 MEIS3Q99687 375 aa19.38■□□□□ 0.69
PDLIM7-210ENST00000503827 CABP5Q9NP86 173 aa19.38■□□□□ 0.69
PDLIM7-210ENST00000503827 E9PSI1 815 aa19.37■□□□□ 0.69
PDLIM7-210ENST00000503827 PQBP1O60828 265 aaKnown RBP19.37■□□□□ 0.69
PDLIM7-210ENST00000503827 COG2Q14746 738 aa19.37■□□□□ 0.69
PDLIM7-210ENST00000503827 ABCB5Q2M3G0 1257 aa19.37■□□□□ 0.69
PDLIM7-210ENST00000503827 CERKLQ49MI3 558 aaPredicted RBP19.37■□□□□ 0.69
PDLIM7-210ENST00000503827 RNF180Q86T96 592 aa19.37■□□□□ 0.69
PDLIM7-210ENST00000503827 IL27Q8NEV9 243 aa19.37■□□□□ 0.69
PDLIM7-210ENST00000503827 SPATC1LQ9H0A9 340 aa19.37■□□□□ 0.69
PDLIM7-210ENST00000503827 XPNPEP3Q9NQH7 507 aa19.37■□□□□ 0.69
PDLIM7-210ENST00000503827 SNRKQ9NRH2 765 aa19.37■□□□□ 0.69
PDLIM7-210ENST00000503827 TMEM39AQ9NV64 488 aa19.37■□□□□ 0.69
PDLIM7-210ENST00000503827 HOXC10Q9NYD6 342 aa19.37■□□□□ 0.69
PDLIM7-210ENST00000503827 SERPINB13Q9UIV8 391 aa19.37■□□□□ 0.69
PDLIM7-210ENST00000503827 MYO9BQ13459 2157 aa19.36■□□□□ 0.69
PDLIM7-210ENST00000503827 IGSF3O75054 1194 aa19.36■□□□□ 0.69
PDLIM7-210ENST00000503827 COBLO75128 1261 aa19.36■□□□□ 0.69
PDLIM7-210ENST00000503827 RARBP10826 455 aa19.36■□□□□ 0.69
PDLIM7-210ENST00000503827 ERCC3P19447 782 aa19.36■□□□□ 0.69
PDLIM7-210ENST00000503827 MRPS5P82675 430 aaKnown RBP19.36■□□□□ 0.69
PDLIM7-210ENST00000503827 MAP3K12Q12852 859 aa19.36■□□□□ 0.69
PDLIM7-210ENST00000503827 MTX1Q13505 466 aa19.36■□□□□ 0.69
PDLIM7-210ENST00000503827 AKNAD1Q5T1N1 836 aa19.36■□□□□ 0.69
PDLIM7-210ENST00000503827 UHRF1Q96T88 793 aaPredicted RBP19.36■□□□□ 0.69
PDLIM7-210ENST00000503827 API5Q9BZZ5 524 aaKnown RBP19.36■□□□□ 0.69
PDLIM7-210ENST00000503827 A0A0G2JMZ2 1700 aa19.36■□□□□ 0.69
PDLIM7-210ENST00000503827 USP5P45974 858 aa19.35■□□□□ 0.69
PDLIM7-210ENST00000503827 DYNLL1P63167 89 aaKnown RBP19.35■□□□□ 0.69
PDLIM7-210ENST00000503827 TTC39AQ5SRH9 613 aa19.35■□□□□ 0.69
PDLIM7-210ENST00000503827 ABRAQ8N0Z2 381 aa19.35■□□□□ 0.69
PDLIM7-210ENST00000503827 MAML3Q96JK9 1138 aa19.35■□□□□ 0.69
PDLIM7-210ENST00000503827 EHD4Q9H223 541 aa19.35■□□□□ 0.69
PDLIM7-210ENST00000503827 MROH8Q9H579 483 aa19.35■□□□□ 0.69
PDLIM7-210ENST00000503827 NOB1Q9ULX3 412 aaKnown RBP19.35■□□□□ 0.69
PDLIM7-210ENST00000503827 ANP32CO43423 234 aa19.34■□□□□ 0.69
PDLIM7-210ENST00000503827 GNAI3P08754 354 aa19.34■□□□□ 0.69
PDLIM7-210ENST00000503827 G3BP1Q13283 466 aaKnown RBP eCLIP19.34■□□□□ 0.69
PDLIM7-210ENST00000503827 CCDC158Q5M9N0 1113 aa19.34■□□□□ 0.69
PDLIM7-210ENST00000503827 CCDC129Q6ZRS4 1044 aa19.34■□□□□ 0.69
PDLIM7-210ENST00000503827 TTC6Q86TZ1 520 aa19.34■□□□□ 0.69
PDLIM7-210ENST00000503827 NRBP1Q9UHY1 535 aa19.34■□□□□ 0.69
PDLIM7-210ENST00000503827 A0A1W2PQ45 241 aaPredicted RBP19.33■□□□□ 0.68
PDLIM7-210ENST00000503827 A0A1W2PQY0 241 aa19.33■□□□□ 0.68
PDLIM7-210ENST00000503827 DCDC2CA8MYV0 355 aa19.33■□□□□ 0.68
PDLIM7-210ENST00000503827 CYP2E1P05181 493 aaPredicted RBP19.33■□□□□ 0.68
PDLIM7-210ENST00000503827 PLS1Q14651 629 aa19.33■□□□□ 0.68
PDLIM7-210ENST00000503827 NCAPG2Q86XI2 1143 aa19.33■□□□□ 0.68
PDLIM7-210ENST00000503827 MB21D1Q8N884 522 aa19.33■□□□□ 0.68
PDLIM7-210ENST00000503827 SLC44A5Q8NCS7 719 aa19.33■□□□□ 0.68
PDLIM7-210ENST00000503827 TOX2Q96NM4 488 aa19.33■□□□□ 0.68
PDLIM7-210ENST00000503827 TANGO6Q9C0B7 1094 aa19.33■□□□□ 0.68
PDLIM7-210ENST00000503827 PRDM12Q9H4Q4 367 aa19.33■□□□□ 0.68
PDLIM7-210ENST00000503827 PGK1P00558 417 aa19.32■□□□□ 0.68
PDLIM7-210ENST00000503827 CYP7A1P22680 504 aa19.32■□□□□ 0.68
PDLIM7-210ENST00000503827 FAAP100Q0VG06 881 aa19.32■□□□□ 0.68
PDLIM7-210ENST00000503827 CCDC174Q6PII3 467 aa19.32■□□□□ 0.68
PDLIM7-210ENST00000503827 ANKRD33Q7Z3H0 272 aa19.32■□□□□ 0.68
PDLIM7-210ENST00000503827 CERS3Q8IU89 383 aa19.32■□□□□ 0.68
PDLIM7-210ENST00000503827 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.32■□□□□ 0.689e-10■■■□□ 15.9
PDLIM7-210ENST00000503827 TIMP1P01033 207 aa19.31■□□□□ 0.68
PDLIM7-210ENST00000503827 FCER1AP12319 257 aa19.31■□□□□ 0.68
PDLIM7-210ENST00000503827 HOXD11P31277 338 aaPredicted RBP19.31■□□□□ 0.68
PDLIM7-210ENST00000503827 PBX4Q9BYU1 374 aa19.31■□□□□ 0.68
PDLIM7-210ENST00000503827 TCF20Q9UGU0 1960 aaKnown RBP19.31■□□□□ 0.68
PDLIM7-210ENST00000503827 NCOR1O75376 2440 aa19.31■□□□□ 0.68
PDLIM7-210ENST00000503827 PBX2P40425 430 aa19.3■□□□□ 0.68
PDLIM7-210ENST00000503827 SLFN5Q08AF3 891 aa19.3■□□□□ 0.68
PDLIM7-210ENST00000503827 PPIGQ13427 754 aaKnown RBP eCLIP19.3■□□□□ 0.681e-7■■■□□ 16.8
PDLIM7-210ENST00000503827 SEPT2Q15019 361 aa19.3■□□□□ 0.68
PDLIM7-210ENST00000503827 CCDC85BQ15834 202 aaPredicted RBP19.3■□□□□ 0.68
PDLIM7-210ENST00000503827 NUP133Q8WUM0 1156 aa19.3■□□□□ 0.68
PDLIM7-210ENST00000503827 C1QTNF1Q9BXJ1 281 aa19.3■□□□□ 0.68
PDLIM7-210ENST00000503827 STARD7Q9NQZ5 370 aa19.3■□□□□ 0.68
PDLIM7-210ENST00000503827 IGFBP4P22692 258 aa19.29■□□□□ 0.68
PDLIM7-210ENST00000503827 DSG3P32926 999 aa19.29■□□□□ 0.68
PDLIM7-210ENST00000503827 GUCY1A2P33402 732 aa19.29■□□□□ 0.68
PDLIM7-210ENST00000503827 SHMT1P34896 483 aa19.29■□□□□ 0.68
PDLIM7-210ENST00000503827 ZAP70P43403 619 aa19.29■□□□□ 0.68
PDLIM7-210ENST00000503827 MFSD5Q6N075 450 aa19.29■□□□□ 0.68
PDLIM7-210ENST00000503827 MIGA1Q8NAN2 632 aa19.29■□□□□ 0.68
PDLIM7-210ENST00000503827 TSEN34Q9BSV6 310 aaKnown RBP19.29■□□□□ 0.68
PDLIM7-210ENST00000503827 TSPYL2Q9H2G4 693 aaPredicted RBP19.29■□□□□ 0.68
PDLIM7-210ENST00000503827 PIH1D3Q9NQM4 214 aaKnown RBP19.29■□□□□ 0.68
PDLIM7-210ENST00000503827 COL11A1P12107 1806 aaPredicted RBP19.29■□□□□ 0.68
PDLIM7-210ENST00000503827 PARP14Q460N5 1801 aa19.29■□□□□ 0.68
PDLIM7-210ENST00000503827 GBF1Q92538 1859 aa19.28■□□□□ 0.68
PDLIM7-210ENST00000503827 GRXCR1A8MXD5 290 aa19.28■□□□□ 0.68
PDLIM7-210ENST00000503827 AKR1A1P14550 325 aa19.28■□□□□ 0.68
PDLIM7-210ENST00000503827 ACLYP53396 1101 aa19.28■□□□□ 0.68
PDLIM7-210ENST00000503827 DBNDD2Q9BQY9 259 aa19.28■□□□□ 0.68
PDLIM7-210ENST00000503827 TINF2Q9BSI4 451 aa19.28■□□□□ 0.68
PDLIM7-210ENST00000503827 GPR108Q9NPR9 543 aa19.28■□□□□ 0.68
PDLIM7-210ENST00000503827 ROBO3Q96MS0 1386 aa19.28■□□□□ 0.68
PDLIM7-210ENST00000503827 MYH8P13535 1937 aa19.27■□□□□ 0.68
PDLIM7-210ENST00000503827 A0A1W2PRG0 241 aa19.27■□□□□ 0.68
PDLIM7-210ENST00000503827 MPHOSPH10O00566 681 aaKnown RBP19.27■□□□□ 0.68
PDLIM7-210ENST00000503827 SLC25A27O95847 323 aa19.27■□□□□ 0.68
PDLIM7-210ENST00000503827 ADGRE1Q14246 886 aa19.27■□□□□ 0.68
PDLIM7-210ENST00000503827 TNNI3KQ59H18 835 aa19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms