RNA–Protein interactions for RNA: ENST00000503659.5

RNF4-204, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 558 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-204ENST00000503659 CEP290O15078 2479 aa21.88■■□□□ 1.09
RNF4-204ENST00000503659 SPDYE16A6NNV3 312 aaPredicted RBP21.87■■□□□ 1.09
RNF4-204ENST00000503659 MINDY4BA8MYZ0 360 aa21.87■■□□□ 1.09
RNF4-204ENST00000503659 PATL2C9JE40 543 aaKnown RBP21.87■■□□□ 1.09
RNF4-204ENST00000503659 TDO2P48775 406 aa21.87■■□□□ 1.09
RNF4-204ENST00000503659 B4GALNT3Q6L9W6 998 aa21.87■■□□□ 1.09
RNF4-204ENST00000503659 LBX2Q6XYB7 198 aa21.87■■□□□ 1.09
RNF4-204ENST00000503659 IFNL3Q8IZI9 196 aa21.87■■□□□ 1.09
RNF4-204ENST00000503659 EVI5LQ96CN4 794 aa21.87■■□□□ 1.09
RNF4-204ENST00000503659 UNC93B1Q9H1C4 597 aa21.87■■□□□ 1.09
RNF4-204ENST00000503659 PORCNQ9H237 461 aa21.87■■□□□ 1.09
RNF4-204ENST00000503659 ARHGEF10LQ9HCE6 1279 aa21.87■■□□□ 1.09
RNF4-204ENST00000503659 TMX2Q9Y320 296 aa21.87■■□□□ 1.09
RNF4-204ENST00000503659 MYH4Q9Y623 1939 aa21.86■■□□□ 1.09
RNF4-204ENST00000503659 FOXP2O15409 715 aa21.86■■□□□ 1.09
RNF4-204ENST00000503659 SGPL1O95470 568 aa21.86■■□□□ 1.09
RNF4-204ENST00000503659 RASA1P20936 1047 aa21.86■■□□□ 1.09
RNF4-204ENST00000503659 UBE2Q1Q7Z7E8 422 aa21.86■■□□□ 1.09
RNF4-204ENST00000503659 STK11IPQ8N1F8 1099 aa21.86■■□□□ 1.09
RNF4-204ENST00000503659 RABGAP1Q9Y3P9 1069 aa21.86■■□□□ 1.09
RNF4-204ENST00000503659 COL11A1P12107 1806 aaPredicted RBP21.85■■□□□ 1.09
RNF4-204ENST00000503659 APPP05067 770 aa21.85■■□□□ 1.09
RNF4-204ENST00000503659 EEF2P13639 858 aaKnown RBP21.85■■□□□ 1.09
RNF4-204ENST00000503659 NUCB1Q02818 461 aa21.85■■□□□ 1.09
RNF4-204ENST00000503659 CCDC129Q6ZRS4 1044 aa21.85■■□□□ 1.09
RNF4-204ENST00000503659 LPAR1Q92633 364 aa21.85■■□□□ 1.09
RNF4-204ENST00000503659 VCPKMTQ9H867 229 aa21.85■■□□□ 1.09
RNF4-204ENST00000503659 PAK6Q9NQU5 681 aaPredicted RBP21.85■■□□□ 1.09
RNF4-204ENST00000503659 BTBD7Q9P203 1132 aa21.85■■□□□ 1.09
RNF4-204ENST00000503659 HMGCRP04035 888 aa21.84■■□□□ 1.09
RNF4-204ENST00000503659 MAPK4P31152 587 aa21.84■■□□□ 1.09
RNF4-204ENST00000503659 CHD1LQ86WJ1 897 aa21.84■■□□□ 1.09
RNF4-204ENST00000503659 SPICE1Q8N0Z3 855 aa21.84■■□□□ 1.09
RNF4-204ENST00000503659 HTATIP2Q9BUP3 242 aa21.84■■□□□ 1.09
RNF4-204ENST00000503659 TANGO6Q9C0B7 1094 aa21.84■■□□□ 1.09
RNF4-204ENST00000503659 SH2D4AQ9H788 454 aa21.84■■□□□ 1.09
RNF4-204ENST00000503659 KANSL2Q9H9L4 492 aa21.84■■□□□ 1.09
RNF4-204ENST00000503659 GPR142Q7Z601 462 aa21.83■■□□□ 1.09
RNF4-204ENST00000503659 SOCS4Q8WXH5 440 aa21.83■■□□□ 1.09
RNF4-204ENST00000503659 XRCC5P13010 732 aaKnown RBP21.82■■□□□ 1.08
RNF4-204ENST00000503659 COG2Q14746 738 aa21.82■■□□□ 1.08
RNF4-204ENST00000503659 USP6NLQ92738 828 aa21.82■■□□□ 1.08
RNF4-204ENST00000503659 NUDT12Q9BQG2 462 aa21.82■■□□□ 1.08
RNF4-204ENST00000503659 NACAP1Q9BZK3 213 aa21.82■■□□□ 1.08
RNF4-204ENST00000503659 MKNK2Q9HBH9 465 aa21.82■■□□□ 1.08
RNF4-204ENST00000503659 ZNF236Q9UL36 1845 aa21.82■■□□□ 1.08
RNF4-204ENST00000503659 PRDM1O75626 825 aa21.81■■□□□ 1.08
RNF4-204ENST00000503659 FARP2O94887 1054 aaPredicted RBP21.81■■□□□ 1.08
RNF4-204ENST00000503659 ATP2B2Q01814 1243 aa21.81■■□□□ 1.08
RNF4-204ENST00000503659 HABP4Q5JVS0 413 aaKnown RBP21.81■■□□□ 1.08
RNF4-204ENST00000503659 MORN1Q5T089 497 aa21.81■■□□□ 1.08
RNF4-204ENST00000503659 VPS53Q5VIR6 699 aa21.81■■□□□ 1.08
RNF4-204ENST00000503659 PLEKHH3Q7Z736 793 aa21.81■■□□□ 1.08
RNF4-204ENST00000503659 PLEKHM2Q8IWE5 1019 aa21.81■■□□□ 1.08
RNF4-204ENST00000503659 CCAR1Q8IX12 1150 aaKnown RBP21.81■■□□□ 1.08
RNF4-204ENST00000503659 TRMT44Q8IYL2 757 aaKnown RBP21.81■■□□□ 1.08
RNF4-204ENST00000503659 TRIB2Q92519 343 aa21.81■■□□□ 1.08
RNF4-204ENST00000503659 FAM227BQ96M60 508 aa21.81■■□□□ 1.08
RNF4-204ENST00000503659 DEFB118Q96PH6 123 aa21.81■■□□□ 1.08
RNF4-204ENST00000503659 CRISPLD2Q9H0B8 497 aa21.81■■□□□ 1.08
RNF4-204ENST00000503659 NAPBQ9H115 298 aa21.81■■□□□ 1.08
RNF4-204ENST00000503659 IGKV6D-41A0A0C4DH26 115 aa21.8■■□□□ 1.08
RNF4-204ENST00000503659 A0A0D9SFI3 127 aa21.8■■□□□ 1.08
RNF4-204ENST00000503659 WDR46O15213 610 aaKnown RBP21.8■■□□□ 1.08
RNF4-204ENST00000503659 CYP2B6P20813 491 aa21.8■■□□□ 1.08
RNF4-204ENST00000503659 CCNA1P78396 465 aa21.8■■□□□ 1.08
RNF4-204ENST00000503659 TRIM32Q13049 653 aa21.8■■□□□ 1.08
RNF4-204ENST00000503659 OSBPL3Q9H4L5 887 aa21.8■■□□□ 1.08
RNF4-204ENST00000503659 HELLSQ9NRZ9 838 aa21.8■■□□□ 1.08
RNF4-204ENST00000503659 RPTORQ8N122 1335 aa21.8■■□□□ 1.08
RNF4-204ENST00000503659 PLIN4Q96Q06 1357 aa21.79■■□□□ 1.08
RNF4-204ENST00000503659 TFRCP02786 760 aaKnown RBP21.79■■□□□ 1.08
RNF4-204ENST00000503659 DSG3P32926 999 aa21.79■■□□□ 1.08
RNF4-204ENST00000503659 IRX6P78412 446 aaPredicted RBP21.79■■□□□ 1.08
RNF4-204ENST00000503659 PPARAQ07869 468 aa21.79■■□□□ 1.08
RNF4-204ENST00000503659 TICAM2Q86XR7 235 aa21.79■■□□□ 1.08
RNF4-204ENST00000503659 DPF3Q92784 378 aa21.79■■□□□ 1.08
RNF4-204ENST00000503659 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.79■■□□□ 1.08
RNF4-204ENST00000503659 HOXC10Q9NYD6 342 aa21.79■■□□□ 1.08
RNF4-204ENST00000503659 PCDH10Q9P2E7 1040 aa21.79■■□□□ 1.08
RNF4-204ENST00000503659 H0YGN5 161 aa21.78■■□□□ 1.08
RNF4-204ENST00000503659 FLOT1O75955 427 aa21.78■■□□□ 1.08
RNF4-204ENST00000503659 ANKLE1Q8NAG6 615 aa21.78■■□□□ 1.08
RNF4-204ENST00000503659 ATG4CQ96DT6 458 aa21.78■■□□□ 1.08
RNF4-204ENST00000503659 ZNF287Q9HBT7 754 aa21.78■■□□□ 1.08
RNF4-204ENST00000503659 GOPCQ9HD26 462 aa21.78■■□□□ 1.08
RNF4-204ENST00000503659 HMX1Q9NP08 348 aaPredicted RBP21.78■■□□□ 1.08
RNF4-204ENST00000503659 NYAP2Q9P242 653 aa21.78■■□□□ 1.08
RNF4-204ENST00000503659 TRIM6-TRIM34B2RNG4 842 aa21.77■■□□□ 1.08
RNF4-204ENST00000503659 APBA2Q99767 749 aa21.77■■□□□ 1.08
RNF4-204ENST00000503659 MOV10L1Q9BXT6 1211 aaKnown RBP21.77■■□□□ 1.08
RNF4-204ENST00000503659 FBXO28Q9NVF7 368 aa21.77■■□□□ 1.08
RNF4-204ENST00000503659 FRMPD3Q5JV73 1810 aa21.76■■□□□ 1.07
RNF4-204ENST00000503659 PTPREP23469 700 aa21.76■■□□□ 1.07
RNF4-204ENST00000503659 RGS2P41220 211 aa21.76■■□□□ 1.07
RNF4-204ENST00000503659 MAP2K5Q13163 448 aa21.76■■□□□ 1.07
RNF4-204ENST00000503659 NMIQ13287 307 aaPredicted RBP21.76■■□□□ 1.07
RNF4-204ENST00000503659 CCL14Q16627 93 aa21.76■■□□□ 1.07
RNF4-204ENST00000503659 MCMDC2Q4G0Z9 681 aa21.76■■□□□ 1.07
RNF4-204ENST00000503659 FAM83BQ5T0W9 1011 aa21.76■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms