RNA–Protein interactions for RNA: ENST00000502998.1

CLCN3-203, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 493 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-203ENST00000502998 SPC24Q8NBT2 197 aa7.36□□□□□ -1.23
CLCN3-203ENST00000502998 MAGEC3Q8TD91 643 aa7.36□□□□□ -1.23
CLCN3-203ENST00000502998 WHAMMQ8TF30 809 aa7.36□□□□□ -1.23
CLCN3-203ENST00000502998 NUP133Q8WUM0 1156 aa7.36□□□□□ -1.23
CLCN3-203ENST00000502998 SPIRE2Q8WWL2 714 aa7.36□□□□□ -1.23
CLCN3-203ENST00000502998 USP6NLQ92738 828 aa7.36□□□□□ -1.23
CLCN3-203ENST00000502998 SMARCE1Q969G3 411 aa7.36□□□□□ -1.23
CLCN3-203ENST00000502998 RBM41Q96IZ5 413 aaKnown RBP7.36□□□□□ -1.23
CLCN3-203ENST00000502998 CABS1Q96KC9 395 aa7.36□□□□□ -1.23
CLCN3-203ENST00000502998 MTRQ99707 1265 aa7.36□□□□□ -1.23
CLCN3-203ENST00000502998 EPAS1Q99814 870 aa7.36□□□□□ -1.23
CLCN3-203ENST00000502998 OSBPL10Q9BXB5 764 aa7.36□□□□□ -1.23
CLCN3-203ENST00000502998 ZHX3Q9H4I2 956 aa7.36□□□□□ -1.23
CLCN3-203ENST00000502998 KIAA1522Q9P206 1035 aaPredicted RBP7.36□□□□□ -1.23
CLCN3-203ENST00000502998 DDX25Q9UHL0 483 aaKnown RBP7.36□□□□□ -1.23
CLCN3-203ENST00000502998 G3BP2Q9UN86 482 aaKnown RBP7.36□□□□□ -1.23
CLCN3-203ENST00000502998 SSX2IPQ9Y2D8 614 aa7.36□□□□□ -1.23
CLCN3-203ENST00000502998 COG6Q9Y2V7 657 aa7.36□□□□□ -1.23
CLCN3-203ENST00000502998 LUC7L2Q9Y383 392 aaKnown RBP7.36□□□□□ -1.23
CLCN3-203ENST00000502998 PARP4Q9UKK3 1724 aaKnown RBP7.35□□□□□ -1.23
CLCN3-203ENST00000502998 TTC21BQ7Z4L5 1316 aa7.35□□□□□ -1.23
CLCN3-203ENST00000502998 A6NJR5 290 aa7.35□□□□□ -1.23
CLCN3-203ENST00000502998 FAM177BA6PVY3 158 aa7.35□□□□□ -1.23
CLCN3-203ENST00000502998 P4HA2O15460 535 aa7.35□□□□□ -1.23
CLCN3-203ENST00000502998 TTI1O43156 1089 aa7.35□□□□□ -1.23
CLCN3-203ENST00000502998 EVI5O60447 810 aa7.35□□□□□ -1.23
CLCN3-203ENST00000502998 CLASP2O75122 1294 aaKnown RBP7.35□□□□□ -1.23
CLCN3-203ENST00000502998 FGFR1OPO95684 399 aaKnown RBP7.35□□□□□ -1.23
CLCN3-203ENST00000502998 MAGEA10P43363 369 aaPredicted RBP7.35□□□□□ -1.23
CLCN3-203ENST00000502998 TUBA1BP68363 451 aa7.35□□□□□ -1.23
CLCN3-203ENST00000502998 FLIIQ13045 1269 aa7.35□□□□□ -1.23
CLCN3-203ENST00000502998 MYBPC3Q14896 1274 aa7.35□□□□□ -1.23
CLCN3-203ENST00000502998 SLMAPQ14BN4 828 aa7.35□□□□□ -1.23
CLCN3-203ENST00000502998 SEPT2Q15019 361 aa7.35□□□□□ -1.23
CLCN3-203ENST00000502998 ISM2Q6H9L7 571 aa7.35□□□□□ -1.23
CLCN3-203ENST00000502998 MTHFD1LQ6UB35 978 aa7.35□□□□□ -1.23
CLCN3-203ENST00000502998 GIGYF2Q6Y7W6 1299 aaKnown RBP7.35□□□□□ -1.23
CLCN3-203ENST00000502998 TUBA1AQ71U36 451 aa7.35□□□□□ -1.23
CLCN3-203ENST00000502998 CEP57Q86XR8 500 aa7.35□□□□□ -1.23
CLCN3-203ENST00000502998 NT5DC4Q86YG4 428 aa7.35□□□□□ -1.23
CLCN3-203ENST00000502998 BRSK2Q8IWQ3 736 aa7.35□□□□□ -1.23
CLCN3-203ENST00000502998 CEP57L1Q8IYX8 460 aa7.35□□□□□ -1.23
CLCN3-203ENST00000502998 SLC7A5P1Q8MH63 180 aa7.35□□□□□ -1.23
CLCN3-203ENST00000502998 LARGE2Q8N3Y3 721 aa7.35□□□□□ -1.23
CLCN3-203ENST00000502998 SVIPQ8NHG7 77 aa7.35□□□□□ -1.23
CLCN3-203ENST00000502998 KIAA1524Q8TCG1 905 aa7.35□□□□□ -1.23
CLCN3-203ENST00000502998 ACMSDQ8TDX5 336 aa7.35□□□□□ -1.23
CLCN3-203ENST00000502998 ATRIPQ8WXE1 791 aa7.35□□□□□ -1.23
CLCN3-203ENST00000502998 CUL5Q93034 780 aa7.35□□□□□ -1.23
CLCN3-203ENST00000502998 PPP2R3CQ969Q6 453 aa7.35□□□□□ -1.23
CLCN3-203ENST00000502998 TTC14Q96N46 770 aa7.35□□□□□ -1.23
CLCN3-203ENST00000502998 ZMAT2Q96NC0 199 aaKnown RBP7.35□□□□□ -1.23
CLCN3-203ENST00000502998 JPH2Q9BR39 696 aaPredicted RBP7.35□□□□□ -1.23
CLCN3-203ENST00000502998 SYNCQ9H7C4 482 aa7.35□□□□□ -1.23
CLCN3-203ENST00000502998 TFIP11Q9UBB9 837 aaKnown RBP7.35□□□□□ -1.23
CLCN3-203ENST00000502998 XPO7Q9UIA9 1087 aaKnown RBP7.35□□□□□ -1.23
CLCN3-203ENST00000502998 ZNF510Q9Y2H8 683 aa7.35□□□□□ -1.23
CLCN3-203ENST00000502998 AXIN2Q9Y2T1 843 aa7.35□□□□□ -1.23
CLCN3-203ENST00000502998 SQORQ9Y6N5 450 aa7.35□□□□□ -1.23
CLCN3-203ENST00000502998 CPSF1Q10570 1443 aaKnown RBP7.35□□□□□ -1.23
CLCN3-203ENST00000502998 MYOM1P52179 1685 aa7.35□□□□□ -1.23
CLCN3-203ENST00000502998 CHD4Q14839 1912 aa7.35□□□□□ -1.23
CLCN3-203ENST00000502998 LRRC37A3O60309 1634 aa7.34□□□□□ -1.23
CLCN3-203ENST00000502998 TTC21AQ8NDW8 1320 aa7.34□□□□□ -1.23
CLCN3-203ENST00000502998 HOXA2O43364 376 aa7.34□□□□□ -1.23
CLCN3-203ENST00000502998 PRPF40AO75400 957 aaKnown RBP7.34□□□□□ -1.23
CLCN3-203ENST00000502998 ZBTB7AO95365 584 aa7.34□□□□□ -1.23
CLCN3-203ENST00000502998 H2AFXP16104 143 aaPredicted RBP7.34□□□□□ -1.23
CLCN3-203ENST00000502998 S100A5P33763 92 aa7.34□□□□□ -1.23
CLCN3-203ENST00000502998 DDIT3P35638 169 aa7.34□□□□□ -1.23
CLCN3-203ENST00000502998 PHEXP78562 749 aa7.34□□□□□ -1.23
CLCN3-203ENST00000502998 FAM160A1Q05DH4 1040 aa7.34□□□□□ -1.23
CLCN3-203ENST00000502998 DYNC1I2Q13409 638 aaKnown RBP7.34□□□□□ -1.23
CLCN3-203ENST00000502998 CUL3Q13618 768 aa7.34□□□□□ -1.23
CLCN3-203ENST00000502998 RAB3GAP1Q15042 981 aa7.34□□□□□ -1.23
CLCN3-203ENST00000502998 INAQ16352 499 aa7.34□□□□□ -1.23
CLCN3-203ENST00000502998 PTPROQ16827 1216 aa7.34□□□□□ -1.23
CLCN3-203ENST00000502998 SH2D4BQ5SQS7 431 aa7.34□□□□□ -1.23
CLCN3-203ENST00000502998 VARS2Q5ST30 1063 aaKnown RBP7.34□□□□□ -1.23
CLCN3-203ENST00000502998 LRSAM1Q6UWE0 723 aa7.34□□□□□ -1.23
CLCN3-203ENST00000502998 CCBE1Q6UXH8 406 aaPredicted RBP7.34□□□□□ -1.23
CLCN3-203ENST00000502998 TOM1L2Q6ZVM7 507 aa7.34□□□□□ -1.23
CLCN3-203ENST00000502998 RELL1Q8IUW5 271 aa7.34□□□□□ -1.23
CLCN3-203ENST00000502998 ZNF687Q8N1G0 1237 aa7.34□□□□□ -1.23
CLCN3-203ENST00000502998 TTC39CQ8N584 583 aa7.34□□□□□ -1.23
CLCN3-203ENST00000502998 EPSTI1Q96J88 318 aa7.34□□□□□ -1.23
CLCN3-203ENST00000502998 MAML3Q96JK9 1138 aa7.34□□□□□ -1.23
CLCN3-203ENST00000502998 C2orf49Q9BVC5 232 aaPredicted RBP7.34□□□□□ -1.23
CLCN3-203ENST00000502998 CARD11Q9BXL7 1154 aa7.34□□□□□ -1.23
CLCN3-203ENST00000502998 TNMDQ9H2S6 317 aa7.34□□□□□ -1.23
CLCN3-203ENST00000502998 MRPL46Q9H2W6 279 aaKnown RBP7.34□□□□□ -1.23
CLCN3-203ENST00000502998 AS3MTQ9HBK9 375 aa7.34□□□□□ -1.23
CLCN3-203ENST00000502998 ZSWIM6Q9HCJ5 1215 aa7.34□□□□□ -1.23
CLCN3-203ENST00000502998 CD248Q9HCU0 757 aa7.34□□□□□ -1.23
CLCN3-203ENST00000502998 PICK1Q9NRD5 415 aa7.34□□□□□ -1.23
CLCN3-203ENST00000502998 SFMBT1Q9UHJ3 866 aa7.34□□□□□ -1.23
CLCN3-203ENST00000502998 SERPINA10Q9UK55 444 aa7.34□□□□□ -1.23
CLCN3-203ENST00000502998 MON2Q7Z3U7 1717 aa7.34□□□□□ -1.23
CLCN3-203ENST00000502998 PEAK1Q9H792 1746 aa7.34□□□□□ -1.23
CLCN3-203ENST00000502998 CD163L1Q9NR16 1453 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms