RNA–Protein interactions for RNA: ENST00000498613.1

TMEM39B-209, Transcript of transmembrane protein 39B, humanhuman

TSL 3

Gene TMEM39B, Length 854 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39B-209ENST00000498613 IRX3P78415 501 aaPredicted RBP14.98□□□□□ -0.01
TMEM39B-209ENST00000498613 USP17L24Q0WX57 530 aa14.98□□□□□ -0.01
TMEM39B-209ENST00000498613 TAF1CQ15572 869 aaPredicted RBP14.98□□□□□ -0.01
TMEM39B-209ENST00000498613 ZYXQ15942 572 aaKnown RBP14.98□□□□□ -0.01
TMEM39B-209ENST00000498613 TSGA10IPQ3SY00 556 aa14.98□□□□□ -0.01
TMEM39B-209ENST00000498613 ACER1Q8TDN7 264 aa14.98□□□□□ -0.01
TMEM39B-209ENST00000498613 ZSCAN10Q96SZ4 725 aaPredicted RBP14.98□□□□□ -0.01
TMEM39B-209ENST00000498613 ZIC5Q96T25 663 aa14.98□□□□□ -0.01
TMEM39B-209ENST00000498613 PARK7Q99497 189 aaKnown RBP14.98□□□□□ -0.01
TMEM39B-209ENST00000498613 MTA3Q9BTC8 594 aa14.98□□□□□ -0.01
TMEM39B-209ENST00000498613 USP26Q9BXU7 913 aa14.98□□□□□ -0.01
TMEM39B-209ENST00000498613 RNF186Q9NXI6 227 aa14.98□□□□□ -0.01
TMEM39B-209ENST00000498613 HOXC10Q9NYD6 342 aa14.98□□□□□ -0.01
TMEM39B-209ENST00000498613 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.98□□□□□ -0.01
TMEM39B-209ENST00000498613 DOCK1Q14185 1865 aa14.97□□□□□ -0.01
TMEM39B-209ENST00000498613 BTBD19C9JJ37 291 aa14.97□□□□□ -0.01
TMEM39B-209ENST00000498613 FGD1P98174 961 aa14.97□□□□□ -0.01
TMEM39B-209ENST00000498613 ARHGEF6Q15052 776 aa14.97□□□□□ -0.01
TMEM39B-209ENST00000498613 SMCR8Q8TEV9 937 aaPredicted RBP14.97□□□□□ -0.01
TMEM39B-209ENST00000498613 NEK1Q96PY6 1258 aa14.97□□□□□ -0.01
TMEM39B-209ENST00000498613 VCPKMTQ9H867 229 aa14.97□□□□□ -0.01
TMEM39B-209ENST00000498613 KAT14Q9H8E8 782 aa14.97□□□□□ -0.01
TMEM39B-209ENST00000498613 TSKSQ9UJT2 592 aa14.97□□□□□ -0.01
TMEM39B-209ENST00000498613 ISY1Q9ULR0 285 aaKnown RBP14.97□□□□□ -0.01
TMEM39B-209ENST00000498613 MYH8P13535 1937 aa14.97□□□□□ -0.01
TMEM39B-209ENST00000498613 IGKV6D-41A0A0C4DH26 115 aa14.96□□□□□ -0.01
TMEM39B-209ENST00000498613 F5H6K3 240 aa14.96□□□□□ -0.01
TMEM39B-209ENST00000498613 IFIT3O14879 490 aaKnown RBP14.96□□□□□ -0.01
TMEM39B-209ENST00000498613 HOXA7P31268 230 aaPredicted RBP14.96□□□□□ -0.01
TMEM39B-209ENST00000498613 KLRC3Q07444 240 aa14.96□□□□□ -0.01
TMEM39B-209ENST00000498613 SHROOM1Q2M3G4 852 aaPredicted RBP14.96□□□□□ -0.01
TMEM39B-209ENST00000498613 DDX60LQ5H9U9 1706 aaKnown RBP14.96□□□□□ -0.01
TMEM39B-209ENST00000498613 PDE4DIPQ5VU43 2346 aa14.96□□□□□ -0.01
TMEM39B-209ENST00000498613 GTF3C2Q8WUA4 911 aaPredicted RBP14.96□□□□□ -0.01
TMEM39B-209ENST00000498613 C12orf42Q96LP6 360 aa14.96□□□□□ -0.01
TMEM39B-209ENST00000498613 PTPN18Q99952 460 aa14.96□□□□□ -0.01
TMEM39B-209ENST00000498613 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.96□□□□□ -0.01
TMEM39B-209ENST00000498613 NBPF3Q9H094 633 aa14.96□□□□□ -0.01
TMEM39B-209ENST00000498613 EMILIN3Q9NT22 766 aa14.96□□□□□ -0.01
TMEM39B-209ENST00000498613 CTDP1Q9Y5B0 961 aaPredicted RBP14.96□□□□□ -0.01
TMEM39B-209ENST00000498613 SIPA1L1O43166 1804 aa14.96□□□□□ -0.01
TMEM39B-209ENST00000498613 PLIN4Q96Q06 1357 aa14.96□□□□□ -0.02
TMEM39B-209ENST00000498613 NEDD4P46934 1319 aa14.95□□□□□ -0.02
TMEM39B-209ENST00000498613 A0A1W2PRG0 241 aa14.95□□□□□ -0.02
TMEM39B-209ENST00000498613 WDR46O15213 610 aaKnown RBP14.95□□□□□ -0.02
TMEM39B-209ENST00000498613 GCLCP48506 637 aaPredicted RBP14.95□□□□□ -0.02
TMEM39B-209ENST00000498613 COG2Q14746 738 aa14.95□□□□□ -0.02
TMEM39B-209ENST00000498613 IFIT1BQ5T764 474 aaKnown RBP14.95□□□□□ -0.02
TMEM39B-209ENST00000498613 SLFN13Q68D06 897 aa14.95□□□□□ -0.02
TMEM39B-209ENST00000498613 SYNE3Q6ZMZ3 975 aa14.95□□□□□ -0.02
TMEM39B-209ENST00000498613 SIAH1Q8IUQ4 282 aa14.95□□□□□ -0.02
TMEM39B-209ENST00000498613 FAM43AQ8N2R8 423 aa14.95□□□□□ -0.02
TMEM39B-209ENST00000498613 GMCL1P1Q8NEA9 526 aa14.95□□□□□ -0.02
TMEM39B-209ENST00000498613 TMEM87BQ96K49 555 aa14.95□□□□□ -0.02
TMEM39B-209ENST00000498613 ZKSCAN3Q9BRR0 538 aa14.95□□□□□ -0.02
TMEM39B-209ENST00000498613 TANGO6Q9C0B7 1094 aa14.95□□□□□ -0.02
TMEM39B-209ENST00000498613 IL17RBQ9NRM6 502 aa14.95□□□□□ -0.02
TMEM39B-209ENST00000498613 LAMB1P07942 1786 aa14.94□□□□□ -0.02
TMEM39B-209ENST00000498613 IGF2BP3O00425 579 aaKnown RBP eCLIP14.94□□□□□ -0.02
TMEM39B-209ENST00000498613 SLC1A4P43007 532 aa14.94□□□□□ -0.02
TMEM39B-209ENST00000498613 KIF22Q14807 665 aa14.94□□□□□ -0.02
TMEM39B-209ENST00000498613 WTAPQ15007 396 aa14.94□□□□□ -0.02
TMEM39B-209ENST00000498613 TMEM67Q5HYA8 995 aa14.94□□□□□ -0.02
TMEM39B-209ENST00000498613 RCSD1Q6JBY9 416 aa14.94□□□□□ -0.02
TMEM39B-209ENST00000498613 GPAT2Q6NUI2 795 aa14.94□□□□□ -0.02
TMEM39B-209ENST00000498613 NFXL1Q6ZNB6 911 aa14.94□□□□□ -0.02
TMEM39B-209ENST00000498613 DHX32Q7L7V1 743 aaKnown RBP14.94□□□□□ -0.02
TMEM39B-209ENST00000498613 CCAR1Q8IX12 1150 aaKnown RBP14.94□□□□□ -0.02
TMEM39B-209ENST00000498613 SPICE1Q8N0Z3 855 aa14.94□□□□□ -0.02
TMEM39B-209ENST00000498613 CHURC1Q8WUH1 139 aa14.94□□□□□ -0.02
TMEM39B-209ENST00000498613 ANKS1AQ92625 1134 aa14.94□□□□□ -0.02
TMEM39B-209ENST00000498613 RPAP3Q9H6T3 665 aaPredicted RBP14.94□□□□□ -0.02
TMEM39B-209ENST00000498613 PCDH10Q9P2E7 1040 aa14.94□□□□□ -0.02
TMEM39B-209ENST00000498613 OTOFQ9HC10 1997 aa14.94□□□□□ -0.02
TMEM39B-209ENST00000498613 PRC1O43663 620 aa14.93□□□□□ -0.02
TMEM39B-209ENST00000498613 NMT2O60551 498 aa14.93□□□□□ -0.02
TMEM39B-209ENST00000498613 TBC1D8O95759 1140 aa14.93□□□□□ -0.02
TMEM39B-209ENST00000498613 VCAM1P19320 739 aa14.93□□□□□ -0.02
TMEM39B-209ENST00000498613 ANAPC15P60006 121 aa14.93□□□□□ -0.02
TMEM39B-209ENST00000498613 IKQ13123 557 aaPredicted RBP14.93□□□□□ -0.02
TMEM39B-209ENST00000498613 BLOC1S2Q6QNY1 142 aa14.93□□□□□ -0.02
TMEM39B-209ENST00000498613 CATSPERGQ6ZRH7 1159 aa14.93□□□□□ -0.02
TMEM39B-209ENST00000498613 CATIPQ7Z7H3 387 aa14.93□□□□□ -0.02
TMEM39B-209ENST00000498613 CLEC10AQ8IUN9 316 aa14.93□□□□□ -0.02
TMEM39B-209ENST00000498613 TMEM47Q9BQJ4 181 aa14.93□□□□□ -0.02
TMEM39B-209ENST00000498613 CFHR5Q9BXR6 569 aa14.93□□□□□ -0.02
TMEM39B-209ENST00000498613 TACC3Q9Y6A5 838 aa14.93□□□□□ -0.02
TMEM39B-209ENST00000498613 ATAD5Q96QE3 1844 aa14.93□□□□□ -0.02
TMEM39B-209ENST00000498613 TNKSO95271 1327 aa14.92□□□□□ -0.02
TMEM39B-209ENST00000498613 CCDC69A6NI79 296 aa14.92□□□□□ -0.02
TMEM39B-209ENST00000498613 TLR2O60603 784 aa14.92□□□□□ -0.02
TMEM39B-209ENST00000498613 FLOT1O75955 427 aa14.92□□□□□ -0.02
TMEM39B-209ENST00000498613 BMP3P12645 472 aa14.92□□□□□ -0.02
TMEM39B-209ENST00000498613 MOGSQ13724 837 aa14.92□□□□□ -0.02
TMEM39B-209ENST00000498613 TREML2Q5T2D2 321 aa14.92□□□□□ -0.02
TMEM39B-209ENST00000498613 LRRC47Q8N1G4 583 aaKnown RBP14.92□□□□□ -0.02
TMEM39B-209ENST00000498613 DCAF4Q8WV16 495 aa14.92□□□□□ -0.02
TMEM39B-209ENST00000498613 KCNB2Q92953 911 aa14.92□□□□□ -0.02
TMEM39B-209ENST00000498613 JAKMIP1Q96N16 626 aaKnown RBP14.92□□□□□ -0.02
TMEM39B-209ENST00000498613 MCOLN1Q9GZU1 580 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms