RNA–Protein interactions for RNA: ENST00000498562.2

CUL4A-211, Transcript of cullin 4A, humanhuman

TSL 3

Gene CUL4A, Length 790 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-211ENST00000498562 PTPREP23469 700 aa31.22■■■□□ 2.59
CUL4A-211ENST00000498562 UBE3CQ15386 1083 aa31.22■■■□□ 2.59
CUL4A-211ENST00000498562 WDR78Q5VTH9 848 aa31.22■■■□□ 2.59
CUL4A-211ENST00000498562 GRB14Q14449 540 aa31.21■■■□□ 2.59
CUL4A-211ENST00000498562 KIAA1755Q5JYT7 1200 aa31.21■■■□□ 2.59
CUL4A-211ENST00000498562 FLRT1Q9NZU1 646 aa31.21■■■□□ 2.59
CUL4A-211ENST00000498562 PARP14Q460N5 1801 aa31.21■■■□□ 2.59
CUL4A-211ENST00000498562 PFASO15067 1338 aa31.21■■■□□ 2.59
CUL4A-211ENST00000498562 SMIM22K7EJ46 135 aa31.2■■■□□ 2.59
CUL4A-211ENST00000498562 SMARCA5O60264 1052 aaPredicted RBP31.2■■■□□ 2.59
CUL4A-211ENST00000498562 AKR1B1P15121 316 aa31.2■■■□□ 2.59
CUL4A-211ENST00000498562 C12orf60Q5U649 245 aa31.2■■■□□ 2.59
CUL4A-211ENST00000498562 LHX8Q68G74 356 aa31.2■■■□□ 2.59
CUL4A-211ENST00000498562 CLEC10AQ8IUN9 316 aa31.2■■■□□ 2.59
CUL4A-211ENST00000498562 C7orf61Q8IZ16 206 aa31.2■■■□□ 2.59
CUL4A-211ENST00000498562 CYP2D7A0A087X1C5 515 aa31.19■■■□□ 2.58
CUL4A-211ENST00000498562 COG2Q14746 738 aa31.19■■■□□ 2.58
CUL4A-211ENST00000498562 TANGO6Q9C0B7 1094 aa31.19■■■□□ 2.58
CUL4A-211ENST00000498562 IVNS1ABPQ9Y6Y0 642 aa31.19■■■□□ 2.58
CUL4A-211ENST00000498562 A0A1W2PPC1 479 aa31.18■■■□□ 2.58
CUL4A-211ENST00000498562 HOXC6P09630 235 aa31.18■■■□□ 2.58
CUL4A-211ENST00000498562 ICA1Q05084 483 aa31.18■■■□□ 2.58
CUL4A-211ENST00000498562 SIAH1Q8IUQ4 282 aa31.18■■■□□ 2.58
CUL4A-211ENST00000498562 USP17L12C9JPN9 530 aa31.17■■■□□ 2.58
CUL4A-211ENST00000498562 USP17L21D6R901 530 aa31.17■■■□□ 2.58
CUL4A-211ENST00000498562 CDK8P49336 464 aa31.17■■■□□ 2.58
CUL4A-211ENST00000498562 C16orf86Q6ZW13 317 aa31.17■■■□□ 2.58
CUL4A-211ENST00000498562 NPLOC4Q8TAT6 608 aa31.17■■■□□ 2.58
CUL4A-211ENST00000498562 LPAR1Q92633 364 aa31.17■■■□□ 2.58
CUL4A-211ENST00000498562 PUS7LQ9H0K6 701 aaKnown RBP31.17■■■□□ 2.58
CUL4A-211ENST00000498562 HOXC10Q9NYD6 342 aa31.17■■■□□ 2.58
CUL4A-211ENST00000498562 STAP2Q9UGK3 403 aa31.17■■■□□ 2.58
CUL4A-211ENST00000498562 TMX2Q9Y320 296 aa31.17■■■□□ 2.58
CUL4A-211ENST00000498562 LAMA3Q16787 3333 aa31.17■■■□□ 2.58
CUL4A-211ENST00000498562 COL6A1P12109 1028 aa31.16■■■□□ 2.58
CUL4A-211ENST00000498562 MFSD14CQ5VZR4 134 aa31.16■■■□□ 2.58
CUL4A-211ENST00000498562 ZSCAN25Q6NSZ9 544 aa31.16■■■□□ 2.58
CUL4A-211ENST00000498562 AMOTL1Q8IY63 956 aa31.16■■■□□ 2.58
CUL4A-211ENST00000498562 CCDC17Q96LX7 622 aa31.16■■■□□ 2.58
CUL4A-211ENST00000498562 MOV10L1Q9BXT6 1211 aaKnown RBP31.16■■■□□ 2.58
CUL4A-211ENST00000498562 ARHGEF10LQ9HCE6 1279 aa31.16■■■□□ 2.58
CUL4A-211ENST00000498562 ZMYND8Q9ULU4 1186 aaPredicted RBP31.16■■■□□ 2.58
CUL4A-211ENST00000498562 SLC4A4Q9Y6R1 1079 aa31.16■■■□□ 2.58
CUL4A-211ENST00000498562 SPATC1LQ9H0A9 340 aa31.15■■■□□ 2.58
CUL4A-211ENST00000498562 VCPKMTQ9H867 229 aa31.15■■■□□ 2.58
CUL4A-211ENST00000498562 DDRGK1Q96HY6 314 aa31.14■■■□□ 2.58
CUL4A-211ENST00000498562 GDF15Q99988 308 aa31.14■■■□□ 2.58
CUL4A-211ENST00000498562 SH2D4AQ9H788 454 aa31.14■■■□□ 2.58
CUL4A-211ENST00000498562 GREB1LQ9C091 1923 aaPredicted RBP31.14■■■□□ 2.57
CUL4A-211ENST00000498562 IGHA2P01877 340 aa31.13■■■□□ 2.57
CUL4A-211ENST00000498562 DSG3P32926 999 aa31.13■■■□□ 2.57
CUL4A-211ENST00000498562 CTR9Q6PD62 1173 aa31.13■■■□□ 2.57
CUL4A-211ENST00000498562 SPICE1Q8N0Z3 855 aa31.13■■■□□ 2.57
CUL4A-211ENST00000498562 SHCBP1Q8NEM2 672 aa31.13■■■□□ 2.57
CUL4A-211ENST00000498562 ECHDC1Q9NTX5 307 aa31.13■■■□□ 2.57
CUL4A-211ENST00000498562 ATP2B2Q01814 1243 aa31.12■■■□□ 2.57
CUL4A-211ENST00000498562 MB21D1Q8N884 522 aa31.12■■■□□ 2.57
CUL4A-211ENST00000498562 COL11A1P12107 1806 aaPredicted RBP31.12■■■□□ 2.57
CUL4A-211ENST00000498562 FLOT1O75955 427 aa31.11■■■□□ 2.57
CUL4A-211ENST00000498562 ATG4CQ96DT6 458 aa31.11■■■□□ 2.57
CUL4A-211ENST00000498562 WDR46O15213 610 aaKnown RBP31.1■■■□□ 2.57
CUL4A-211ENST00000498562 SYN1P17600 705 aa31.1■■■□□ 2.57
CUL4A-211ENST00000498562 ERCC3P19447 782 aa31.1■■■□□ 2.57
CUL4A-211ENST00000498562 ADORA2AP29274 412 aa31.1■■■□□ 2.57
CUL4A-211ENST00000498562 CYP2C19P33261 490 aa31.1■■■□□ 2.57
CUL4A-211ENST00000498562 DCTPP1Q9H773 170 aa31.1■■■□□ 2.57
CUL4A-211ENST00000498562 ARPP21Q9UBL0 812 aaPredicted RBP31.1■■■□□ 2.57
CUL4A-211ENST00000498562 DDX20Q9UHI6 824 aaKnown RBP31.1■■■□□ 2.57
CUL4A-211ENST00000498562 STRNO43815 780 aa31.09■■■□□ 2.57
CUL4A-211ENST00000498562 BMP8BP34820 402 aa31.09■■■□□ 2.57
CUL4A-211ENST00000498562 KBTBD3Q8NAB2 608 aa31.09■■■□□ 2.57
CUL4A-211ENST00000498562 SOX1O00570 391 aaPredicted RBP31.08■■■□□ 2.57
CUL4A-211ENST00000498562 CYBAP13498 195 aa31.08■■■□□ 2.57
CUL4A-211ENST00000498562 EEF2P13639 858 aaKnown RBP31.08■■■□□ 2.57
CUL4A-211ENST00000498562 DPP9Q86TI2 863 aa31.08■■■□□ 2.57
CUL4A-211ENST00000498562 TRPV1Q8NER1 839 aa31.08■■■□□ 2.57
CUL4A-211ENST00000498562 STRBPQ96SI9 672 aaKnown RBP31.08■■■□□ 2.57
CUL4A-211ENST00000498562 MSCO60682 206 aa31.07■■■□□ 2.56
CUL4A-211ENST00000498562 LRRC26Q2I0M4 334 aa31.07■■■□□ 2.56
CUL4A-211ENST00000498562 TSHZ3Q63HK5 1081 aa31.07■■■□□ 2.56
CUL4A-211ENST00000498562 OLFML2BQ68BL8 750 aa31.07■■■□□ 2.56
CUL4A-211ENST00000498562 KANSL2Q9H9L4 492 aa31.07■■■□□ 2.56
CUL4A-211ENST00000498562 COBLO75128 1261 aa31.06■■■□□ 2.56
CUL4A-211ENST00000498562 CNGA1P29973 690 aa31.06■■■□□ 2.56
CUL4A-211ENST00000498562 PLS1Q14651 629 aa31.06■■■□□ 2.56
CUL4A-211ENST00000498562 MROH8Q9H579 483 aa31.06■■■□□ 2.56
CUL4A-211ENST00000498562 ROBO3Q96MS0 1386 aa31.05■■■□□ 2.56
CUL4A-211ENST00000498562 MAGEA10P43363 369 aaPredicted RBP31.05■■■□□ 2.56
CUL4A-211ENST00000498562 SBK1Q52WX2 424 aa31.05■■■□□ 2.56
CUL4A-211ENST00000498562 NCAPG2Q86XI2 1143 aa31.05■■■□□ 2.56
CUL4A-211ENST00000498562 OSBP2Q969R2 916 aa31.05■■■□□ 2.56
CUL4A-211ENST00000498562 GPATCH3Q96I76 525 aa31.05■■■□□ 2.56
CUL4A-211ENST00000498562 GNL3Q9BVP2 549 aaKnown RBP eCLIP31.05■■■□□ 2.56
CUL4A-211ENST00000498562 GSG1L2A8MUP6 293 aa31.04■■■□□ 2.56
CUL4A-211ENST00000498562 TMEM132BQ14DG7 1078 aa31.04■■■□□ 2.56
CUL4A-211ENST00000498562 SAMD1Q6SPF0 538 aaPredicted RBP31.04■■■□□ 2.56
CUL4A-211ENST00000498562 ABRAQ8N0Z2 381 aa31.04■■■□□ 2.56
CUL4A-211ENST00000498562 APPBP2Q92624 585 aa31.04■■■□□ 2.56
CUL4A-211ENST00000498562 LRCH3Q96II8 777 aa31.04■■■□□ 2.56
CUL4A-211ENST00000498562 ADAMTS5Q9UNA0 930 aa31.04■■■□□ 2.56
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms