RNA–Protein interactions for RNA: ENST00000498466.1

CCDC58-207, Transcript of coiled-coil domain containing 58, humanhuman

TSL 2

Gene CCDC58, Length 683 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-207ENST00000498466 MOV10L1Q9BXT6 1211 aaKnown RBP16.97■□□□□ 0.31
CCDC58-207ENST00000498466 TANGO6Q9C0B7 1094 aa16.97■□□□□ 0.31
CCDC58-207ENST00000498466 CCDC8Q9H0W5 538 aaPredicted RBP16.97■□□□□ 0.31
CCDC58-207ENST00000498466 TLR7Q9NYK1 1049 aaKnown RBP16.97■□□□□ 0.31
CCDC58-207ENST00000498466 SEPT4O43236 478 aa16.96■□□□□ 0.31
CCDC58-207ENST00000498466 BCAR3O75815 825 aa16.96■□□□□ 0.31
CCDC58-207ENST00000498466 IGHA2P01877 340 aa16.96■□□□□ 0.31
CCDC58-207ENST00000498466 POLR3DP05423 398 aaPredicted RBP16.96■□□□□ 0.31
CCDC58-207ENST00000498466 PLCD1P51178 756 aa16.96■□□□□ 0.31
CCDC58-207ENST00000498466 MAP3K12Q12852 859 aa16.96■□□□□ 0.31
CCDC58-207ENST00000498466 COG2Q14746 738 aa16.96■□□□□ 0.31
CCDC58-207ENST00000498466 SEPT2Q15019 361 aa16.96■□□□□ 0.31
CCDC58-207ENST00000498466 SSH3Q8TE77 659 aa16.96■□□□□ 0.31
CCDC58-207ENST00000498466 MYLIPQ8WY64 445 aa16.96■□□□□ 0.31
CCDC58-207ENST00000498466 SPATC1LQ9H0A9 340 aa16.96■□□□□ 0.31
CCDC58-207ENST00000498466 HOXC10Q9NYD6 342 aa16.96■□□□□ 0.31
CCDC58-207ENST00000498466 LTBP2Q14767 1821 aa16.96■□□□□ 0.3
CCDC58-207ENST00000498466 MPHOSPH10O00566 681 aaKnown RBP16.95■□□□□ 0.3
CCDC58-207ENST00000498466 ERCC3P19447 782 aa16.95■□□□□ 0.3
CCDC58-207ENST00000498466 GUCY1A2P33402 732 aa16.95■□□□□ 0.3
CCDC58-207ENST00000498466 ADCYAP1R1P41586 468 aa16.95■□□□□ 0.3
CCDC58-207ENST00000498466 SMAD3P84022 425 aaKnown RBP16.95■□□□□ 0.3
CCDC58-207ENST00000498466 ATP8B2P98198 1209 aa16.95■□□□□ 0.3
CCDC58-207ENST00000498466 SNX17Q15036 470 aa16.95■□□□□ 0.3
CCDC58-207ENST00000498466 TMEM57Q8N5G2 664 aa16.95■□□□□ 0.3
CCDC58-207ENST00000498466 FERMT2Q96AC1 680 aa16.95■□□□□ 0.3
CCDC58-207ENST00000498466 PDLIM7Q9NR12 457 aa16.95■□□□□ 0.3
CCDC58-207ENST00000498466 SLC5A4Q9NY91 659 aa16.95■□□□□ 0.3
CCDC58-207ENST00000498466 MYH1P12882 1939 aa16.94■□□□□ 0.3
CCDC58-207ENST00000498466 COBLO75128 1261 aa16.94■□□□□ 0.3
CCDC58-207ENST00000498466 FOSL2P15408 326 aa16.94■□□□□ 0.3
CCDC58-207ENST00000498466 PLS1Q14651 629 aa16.94■□□□□ 0.3
CCDC58-207ENST00000498466 PRAMEF19Q5SWL8 479 aa16.94■□□□□ 0.3
CCDC58-207ENST00000498466 SH3RF1Q7Z6J0 888 aa16.94■□□□□ 0.3
CCDC58-207ENST00000498466 SHCBP1Q8NEM2 672 aa16.94■□□□□ 0.3
CCDC58-207ENST00000498466 EAF2Q96CJ1 260 aaPredicted RBP16.94■□□□□ 0.3
CCDC58-207ENST00000498466 TTYH1Q9H313 450 aaPredicted RBP16.94■□□□□ 0.3
CCDC58-207ENST00000498466 ANTXR1Q9H6X2 564 aa16.94■□□□□ 0.3
CCDC58-207ENST00000498466 C1orf115Q9H7X2 142 aa16.94■□□□□ 0.3
CCDC58-207ENST00000498466 MYO5AQ9Y4I1 1855 aaKnown RBP16.94■□□□□ 0.3
CCDC58-207ENST00000498466 A0A1W2PRG0 241 aa16.93■□□□□ 0.3
CCDC58-207ENST00000498466 TRIM43BA6NCK2 446 aa16.93■□□□□ 0.3
CCDC58-207ENST00000498466 LRRC41Q15345 812 aa16.93■□□□□ 0.3
CCDC58-207ENST00000498466 NCAPG2Q86XI2 1143 aa16.93■□□□□ 0.3
CCDC58-207ENST00000498466 TRIM43Q96BQ3 446 aaPredicted RBP16.93■□□□□ 0.3
CCDC58-207ENST00000498466 MAGEB6P1A0A0J9YX57 407 aa16.92■□□□□ 0.3
CCDC58-207ENST00000498466 FAM47AQ5JRC9 791 aa16.92■□□□□ 0.3
CCDC58-207ENST00000498466 C1orf53Q5VUE5 145 aa16.92■□□□□ 0.3
CCDC58-207ENST00000498466 TMED8Q6PL24 325 aaPredicted RBP16.92■□□□□ 0.3
CCDC58-207ENST00000498466 MB21D1Q8N884 522 aa16.92■□□□□ 0.3
CCDC58-207ENST00000498466 RIOK1Q9BRS2 568 aaKnown RBP16.92■□□□□ 0.3
CCDC58-207ENST00000498466 MROH8Q9H579 483 aa16.92■□□□□ 0.3
CCDC58-207ENST00000498466 NOP58Q9Y2X3 529 aaKnown RBP16.92■□□□□ 0.3
CCDC58-207ENST00000498466 RLFQ13129 1914 aa16.92■□□□□ 0.3
CCDC58-207ENST00000498466 ZNF236Q9UL36 1845 aa16.91■□□□□ 0.3
CCDC58-207ENST00000498466 FLOT1O75955 427 aa16.91■□□□□ 0.3
CCDC58-207ENST00000498466 TLE2Q04725 743 aa16.91■□□□□ 0.3
CCDC58-207ENST00000498466 GABPAQ06546 454 aa16.91■□□□□ 0.3
CCDC58-207ENST00000498466 SAMD1Q6SPF0 538 aaPredicted RBP16.91■□□□□ 0.3
CCDC58-207ENST00000498466 ABRAQ8N0Z2 381 aa16.91■□□□□ 0.3
CCDC58-207ENST00000498466 MAML3Q96JK9 1138 aa16.91■□□□□ 0.3
CCDC58-207ENST00000498466 RNPC3Q96LT9 517 aaKnown RBP16.91■□□□□ 0.3
CCDC58-207ENST00000498466 PRDM6Q9NQX0 595 aa16.91■□□□□ 0.3
CCDC58-207ENST00000498466 MCM9Q9NXL9 1143 aa16.91■□□□□ 0.3
CCDC58-207ENST00000498466 TACC3Q9Y6A5 838 aa16.91■□□□□ 0.3
CCDC58-207ENST00000498466 CLTBP09497 229 aa16.9■□□□□ 0.3
CCDC58-207ENST00000498466 RARBP10826 455 aa16.9■□□□□ 0.3
CCDC58-207ENST00000498466 FCER1AP12319 257 aa16.9■□□□□ 0.3
CCDC58-207ENST00000498466 DSG3P32926 999 aa16.9■□□□□ 0.3
CCDC58-207ENST00000498466 EVX2Q03828 476 aa16.9■□□□□ 0.3
CCDC58-207ENST00000498466 ZKSCAN2Q63HK3 967 aa16.9■□□□□ 0.3
CCDC58-207ENST00000498466 CRNKL1Q9BZJ0 848 aaKnown RBP16.9■□□□□ 0.3
CCDC58-207ENST00000498466 XPNPEP3Q9NQH7 507 aa16.9■□□□□ 0.3
CCDC58-207ENST00000498466 MUC3AQ02505 3323 aa16.9■□□□□ 0.3
CCDC58-207ENST00000498466 ITGB8P26012 769 aa16.89■□□□□ 0.29
CCDC58-207ENST00000498466 KIAA1755Q5JYT7 1200 aa16.89■□□□□ 0.29
CCDC58-207ENST00000498466 TMEM179Q6ZVK1 233 aa16.89■□□□□ 0.29
CCDC58-207ENST00000498466 RNF180Q86T96 592 aa16.89■□□□□ 0.29
CCDC58-207ENST00000498466 SPICE1Q8N0Z3 855 aa16.89■□□□□ 0.29
CCDC58-207ENST00000498466 SYMPKQ92797 1274 aaKnown RBP16.89■□□□□ 0.29
CCDC58-207ENST00000498466 ATG4CQ96DT6 458 aa16.89■□□□□ 0.29
CCDC58-207ENST00000498466 PHF24Q9UPV7 400 aa16.89■□□□□ 0.29
CCDC58-207ENST00000498466 TMEM265A0A087WTH1 108 aa16.88■□□□□ 0.29
CCDC58-207ENST00000498466 PQBP1O60828 265 aaKnown RBP16.88■□□□□ 0.29
CCDC58-207ENST00000498466 RAG1P15918 1043 aa16.88■□□□□ 0.29
CCDC58-207ENST00000498466 SLC9C2Q5TAH2 1124 aa16.88■□□□□ 0.29
CCDC58-207ENST00000498466 AACSQ86V21 672 aa16.88■□□□□ 0.29
CCDC58-207ENST00000498466 SLC44A5Q8NCS7 719 aa16.88■□□□□ 0.29
CCDC58-207ENST00000498466 ARHGEF10LQ9HCE6 1279 aa16.88■□□□□ 0.29
CCDC58-207ENST00000498466 SLC25A27O95847 323 aa16.87■□□□□ 0.29
CCDC58-207ENST00000498466 PGK1P00558 417 aa16.87■□□□□ 0.29
CCDC58-207ENST00000498466 EPHB4P54760 987 aa16.87■□□□□ 0.29
CCDC58-207ENST00000498466 ICA1Q05084 483 aa16.87■□□□□ 0.29
CCDC58-207ENST00000498466 TMEM132BQ14DG7 1078 aa16.87■□□□□ 0.29
CCDC58-207ENST00000498466 TTF1Q15361 905 aaPredicted RBP16.87■□□□□ 0.29
CCDC58-207ENST00000498466 CLEC10AQ8IUN9 316 aa16.87■□□□□ 0.29
CCDC58-207ENST00000498466 FTSJ3Q8IY81 847 aaKnown RBP16.87■□□□□ 0.29
CCDC58-207ENST00000498466 SDR42E1Q8WUS8 393 aa16.87■□□□□ 0.29
CCDC58-207ENST00000498466 MMP19Q99542 508 aa16.87■□□□□ 0.29
CCDC58-207ENST00000498466 SH2D4AQ9H788 454 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms