RNA–Protein interactions for RNA: ENST00000498254.5

CALD1-224, Transcript of caldesmon 1, humanhuman

TSL 3

Gene CALD1, Length 443 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-224ENST00000498254 AGRPO00253 132 aa5.15□□□□□ -1.59
CALD1-224ENST00000498254 RGS13O14921 159 aa5.15□□□□□ -1.59
CALD1-224ENST00000498254 MARCH6O60337 910 aa5.15□□□□□ -1.59
CALD1-224ENST00000498254 CLEC3AO75596 197 aa5.15□□□□□ -1.59
CALD1-224ENST00000498254 CNGA1P29973 690 aa5.15□□□□□ -1.59
CALD1-224ENST00000498254 PMS1P54277 932 aaKnown RBP5.15□□□□□ -1.59
CALD1-224ENST00000498254 DALRD3Q5D0E6 543 aaKnown RBP5.15□□□□□ -1.59
CALD1-224ENST00000498254 YOD1Q5VVQ6 348 aaPredicted RBP5.15□□□□□ -1.59
CALD1-224ENST00000498254 SLC6A19Q695T7 634 aa5.15□□□□□ -1.59
CALD1-224ENST00000498254 KIAA1211Q6ZU35 1233 aa5.15□□□□□ -1.59
CALD1-224ENST00000498254 ADAT2Q7Z6V5 191 aaKnown RBP5.15□□□□□ -1.59
CALD1-224ENST00000498254 MRPL41Q8IXM3 137 aaKnown RBP5.15□□□□□ -1.59
CALD1-224ENST00000498254 CCDC144CPQ8IYA2 1237 aa5.15□□□□□ -1.59
CALD1-224ENST00000498254 SLFN12Q8IYM2 578 aa5.15□□□□□ -1.59
CALD1-224ENST00000498254 JMYQ8N9B5 988 aa5.15□□□□□ -1.59
CALD1-224ENST00000498254 C12orf50Q8NA57 414 aaPredicted RBP5.15□□□□□ -1.59
CALD1-224ENST00000498254 ZBTB38Q8NAP3 1195 aaPredicted RBP5.15□□□□□ -1.59
CALD1-224ENST00000498254 CDC6Q99741 560 aa5.15□□□□□ -1.59
CALD1-224ENST00000498254 TMPRSS13Q9BYE2 586 aa5.15□□□□□ -1.59
CALD1-224ENST00000498254 MKRN2Q9H000 416 aaKnown RBP5.15□□□□□ -1.59
CALD1-224ENST00000498254 ATXN3LQ9H3M9 355 aa5.15□□□□□ -1.59
CALD1-224ENST00000498254 LGR6Q9HBX8 967 aa5.15□□□□□ -1.59
CALD1-224ENST00000498254 CYP4F12Q9HCS2 524 aa5.15□□□□□ -1.59
CALD1-224ENST00000498254 SUCOQ9UBS9 1254 aaKnown RBP5.15□□□□□ -1.59
CALD1-224ENST00000498254 APEX2Q9UBZ4 518 aa5.15□□□□□ -1.59
CALD1-224ENST00000498254 A0A1W2PQU0 124 aa5.14□□□□□ -1.59
CALD1-224ENST00000498254 IQCA1LA6NCM1 817 aa5.14□□□□□ -1.59
CALD1-224ENST00000498254 SPDYE3A6NKU9 549 aa5.14□□□□□ -1.59
CALD1-224ENST00000498254 RBAK-RBAKDNI3L0D1 243 aa5.14□□□□□ -1.59
CALD1-224ENST00000498254 RAB6AP20340 208 aa5.14□□□□□ -1.59
CALD1-224ENST00000498254 ASPAP45381 313 aa5.14□□□□□ -1.59
CALD1-224ENST00000498254 RAC1P63000 192 aa5.14□□□□□ -1.59
CALD1-224ENST00000498254 SLBPQ14493 270 aaKnown RBP eCLIP5.14□□□□□ -1.59
CALD1-224ENST00000498254 BBS9Q3SYG4 887 aa5.14□□□□□ -1.59
CALD1-224ENST00000498254 FAM209AQ5JX71 171 aa5.14□□□□□ -1.59
CALD1-224ENST00000498254 AXDND1Q5T1B0 1012 aaPredicted RBP5.14□□□□□ -1.59
CALD1-224ENST00000498254 HEATR6Q6AI08 1181 aaKnown RBP5.14□□□□□ -1.59
CALD1-224ENST00000498254 FDX2Q6P4F2 183 aa5.14□□□□□ -1.59
CALD1-224ENST00000498254 FBXO11Q86XK2 927 aa5.14□□□□□ -1.59
CALD1-224ENST00000498254 RPUSD2Q8IZ73 545 aaKnown RBP5.14□□□□□ -1.59
CALD1-224ENST00000498254 FMR1NBQ8N0W7 255 aaPredicted RBP5.14□□□□□ -1.59
CALD1-224ENST00000498254 LRRN4CLQ8ND94 238 aa5.14□□□□□ -1.59
CALD1-224ENST00000498254 ADCY4Q8NFM4 1077 aa5.14□□□□□ -1.59
CALD1-224ENST00000498254 EXOC2Q96KP1 924 aa5.14□□□□□ -1.59
CALD1-224ENST00000498254 DHRS1Q96LJ7 313 aa5.14□□□□□ -1.59
CALD1-224ENST00000498254 HAUS7Q99871 368 aa5.14□□□□□ -1.59
CALD1-224ENST00000498254 RNF208Q9H0X6 261 aa5.14□□□□□ -1.59
CALD1-224ENST00000498254 TPSG1Q9NRR2 321 aa5.14□□□□□ -1.59
CALD1-224ENST00000498254 FAM105AQ9NUU6 356 aa5.14□□□□□ -1.59
CALD1-224ENST00000498254 SUGT1Q9Y2Z0 365 aa5.14□□□□□ -1.59
CALD1-224ENST00000498254 ACTL7BQ9Y614 415 aa5.14□□□□□ -1.59
CALD1-224ENST00000498254 ANKRD34BA5PLL1 514 aa5.13□□□□□ -1.59
CALD1-224ENST00000498254 DYRK3O43781 588 aa5.13□□□□□ -1.59
CALD1-224ENST00000498254 RAPGEF3O95398 923 aa5.13□□□□□ -1.59
CALD1-224ENST00000498254 MYCLP1P12525 358 aaPredicted RBP5.13□□□□□ -1.59
CALD1-224ENST00000498254 EVA1CP58658 441 aa5.13□□□□□ -1.59
CALD1-224ENST00000498254 PPP2R2AP63151 447 aa5.13□□□□□ -1.59
CALD1-224ENST00000498254 SOX4Q06945 474 aaPredicted RBP5.13□□□□□ -1.59
CALD1-224ENST00000498254 PRRT3Q5FWE3 981 aa5.13□□□□□ -1.59
CALD1-224ENST00000498254 ILDR2Q71H61 639 aa5.13□□□□□ -1.59
CALD1-224ENST00000498254 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.13□□□□□ -1.59
CALD1-224ENST00000498254 NIM1KQ8IY84 436 aa5.13□□□□□ -1.59
CALD1-224ENST00000498254 SMYD4Q8IYR2 804 aaPredicted RBP5.13□□□□□ -1.59
CALD1-224ENST00000498254 UBR7Q8N806 425 aa5.13□□□□□ -1.59
CALD1-224ENST00000498254 CYB5D2Q8WUJ1 264 aa5.13□□□□□ -1.59
CALD1-224ENST00000498254 ZNF669Q96BR6 464 aaPredicted RBP5.13□□□□□ -1.59
CALD1-224ENST00000498254 APBA2Q99767 749 aa5.13□□□□□ -1.59
CALD1-224ENST00000498254 FAM126AQ9BYI3 521 aaPredicted RBP5.13□□□□□ -1.59
CALD1-224ENST00000498254 BRINP2Q9C0B6 783 aa5.13□□□□□ -1.59
CALD1-224ENST00000498254 EPN3Q9H201 632 aa5.13□□□□□ -1.59
CALD1-224ENST00000498254 ARHGEF4Q9NR80 690 aa5.13□□□□□ -1.59
CALD1-224ENST00000498254 SUSD2Q9UGT4 822 aa5.13□□□□□ -1.59
CALD1-224ENST00000498254 TBX1O43435 398 aa5.12□□□□□ -1.59
CALD1-224ENST00000498254 CBFA2T2O43439 604 aa5.12□□□□□ -1.59
CALD1-224ENST00000498254 ALX3O95076 343 aa5.12□□□□□ -1.59
CALD1-224ENST00000498254 APBA3O96018 575 aa5.12□□□□□ -1.59
CALD1-224ENST00000498254 CST3P01034 146 aaPredicted RBP5.12□□□□□ -1.59
CALD1-224ENST00000498254 ITGAVP06756 1048 aa5.12□□□□□ -1.59
CALD1-224ENST00000498254 CCNFP41002 786 aa5.12□□□□□ -1.59
CALD1-224ENST00000498254 PABPC4Q13310 644 aaKnown RBP eCLIP5.12□□□□□ -1.59
CALD1-224ENST00000498254 SHISA2Q6UWI4 295 aa5.12□□□□□ -1.59
CALD1-224ENST00000498254 ARMCX6Q7L4S7 300 aa5.12□□□□□ -1.59
CALD1-224ENST00000498254 ZNF227Q86WZ6 799 aa5.12□□□□□ -1.59
CALD1-224ENST00000498254 DTWD1Q8N5C7 304 aa5.12□□□□□ -1.59
CALD1-224ENST00000498254 MFSD3Q96ES6 412 aa5.12□□□□□ -1.59
CALD1-224ENST00000498254 IPO9Q96P70 1041 aaKnown RBP5.12□□□□□ -1.59
CALD1-224ENST00000498254 SLC26A8Q96RN1 970 aa5.12□□□□□ -1.59
CALD1-224ENST00000498254 MIPEPQ99797 713 aa5.12□□□□□ -1.59
CALD1-224ENST00000498254 AARSD1Q9BTE6 412 aaKnown RBP5.12□□□□□ -1.59
CALD1-224ENST00000498254 G3BP2Q9UN86 482 aaKnown RBP5.12□□□□□ -1.59
CALD1-224ENST00000498254 PLAAQ9Y263 795 aa5.12□□□□□ -1.59
CALD1-224ENST00000498254 DAGLAQ9Y4D2 1042 aa5.12□□□□□ -1.59
CALD1-224ENST00000498254 ZNF451Q9Y4E5 1061 aa5.12□□□□□ -1.59
CALD1-224ENST00000498254 TRBV23-1A0A0A0MS06 115 aa5.11□□□□□ -1.59
CALD1-224ENST00000498254 TRAV20A0A0B4J274 112 aa5.11□□□□□ -1.59
CALD1-224ENST00000498254 PRODHO43272 600 aa5.11□□□□□ -1.59
CALD1-224ENST00000498254 NAT2P11245 290 aa5.11□□□□□ -1.59
CALD1-224ENST00000498254 GRIA2P42262 883 aa5.11□□□□□ -1.59
CALD1-224ENST00000498254 PRSS36Q5K4E3 855 aa5.11□□□□□ -1.59
CALD1-224ENST00000498254 ZC3HAV1Q7Z2W4 902 aaKnown RBP5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms