RNA–Protein interactions for RNA: ENST00000497980.5

STX1A-214, Transcript of syntaxin 1A, humanhuman

TSL 3

Gene STX1A, Length 503 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STX1A-214ENST00000497980 TRIM6-TRIM34B2RNG4 842 aa29.06■■■□□ 2.24
STX1A-214ENST00000497980 WDR46O15213 610 aaKnown RBP29.06■■■□□ 2.24
STX1A-214ENST00000497980 RASA1P20936 1047 aa29.06■■■□□ 2.24
STX1A-214ENST00000497980 COG2Q14746 738 aa29.06■■■□□ 2.24
STX1A-214ENST00000497980 CWC22Q9HCG8 908 aaKnown RBP29.06■■■□□ 2.24
STX1A-214ENST00000497980 ZNF444Q8N0Y2 327 aaPredicted RBP29.05■■■□□ 2.24
STX1A-214ENST00000497980 MB21D1Q8N884 522 aa29.05■■■□□ 2.24
STX1A-214ENST00000497980 NUDT12Q9BQG2 462 aa29.05■■■□□ 2.24
STX1A-214ENST00000497980 EEF2P13639 858 aaKnown RBP29.04■■■□□ 2.24
STX1A-214ENST00000497980 CAPN2P17655 700 aa29.04■■■□□ 2.24
STX1A-214ENST00000497980 ATP2B2Q01814 1243 aa29.04■■■□□ 2.24
STX1A-214ENST00000497980 CLEC10AQ8IUN9 316 aa29.04■■■□□ 2.24
STX1A-214ENST00000497980 SIAH1Q8IUQ4 282 aa29.04■■■□□ 2.24
STX1A-214ENST00000497980 PLEKHM2Q8IWE5 1019 aa29.04■■■□□ 2.24
STX1A-214ENST00000497980 CENPFP49454 3210 aa29.04■■■□□ 2.24
STX1A-214ENST00000497980 MYCP01106 439 aaPredicted RBP29.03■■■□□ 2.24
STX1A-214ENST00000497980 PPARAQ07869 468 aa29.03■■■□□ 2.24
STX1A-214ENST00000497980 MCMDC2Q4G0Z9 681 aa29.03■■■□□ 2.24
STX1A-214ENST00000497980 PPP4R3BQ5MIZ7 849 aa29.03■■■□□ 2.24
STX1A-214ENST00000497980 TRMT44Q8IYL2 757 aaKnown RBP29.03■■■□□ 2.24
STX1A-214ENST00000497980 GJD2Q9UKL4 321 aa29.03■■■□□ 2.24
STX1A-214ENST00000497980 SYNPO2Q9UMS6 1093 aa29.03■■■□□ 2.24
STX1A-214ENST00000497980 PLIN4Q96Q06 1357 aa29.02■■■□□ 2.24
STX1A-214ENST00000497980 HMGCRP04035 888 aa29.02■■■□□ 2.24
STX1A-214ENST00000497980 INHAP05111 366 aa29.02■■■□□ 2.24
STX1A-214ENST00000497980 EN2P19622 333 aaPredicted RBP29.02■■■□□ 2.24
STX1A-214ENST00000497980 MTFR1Q15390 333 aa29.02■■■□□ 2.24
STX1A-214ENST00000497980 GPR142Q7Z601 462 aa29.02■■■□□ 2.24
STX1A-214ENST00000497980 RILPL2Q969X0 211 aa29.02■■■□□ 2.24
STX1A-214ENST00000497980 RNF208Q9H0X6 261 aa29.02■■■□□ 2.24
STX1A-214ENST00000497980 NYAP2Q9P242 653 aa29.02■■■□□ 2.24
STX1A-214ENST00000497980 FLOT1O75955 427 aa29.01■■■□□ 2.23
STX1A-214ENST00000497980 GJB1P08034 283 aa29.01■■■□□ 2.23
STX1A-214ENST00000497980 XRCC5P13010 732 aaKnown RBP29.01■■■□□ 2.23
STX1A-214ENST00000497980 CCL5P13501 91 aa29.01■■■□□ 2.23
STX1A-214ENST00000497980 ELNP15502 786 aa29.01■■■□□ 2.23
STX1A-214ENST00000497980 MFAP1P55081 439 aaKnown RBP29.01■■■□□ 2.23
STX1A-214ENST00000497980 Q3C1V9 767 aa29.01■■■□□ 2.23
STX1A-214ENST00000497980 PLEKHH3Q7Z736 793 aa29.01■■■□□ 2.23
STX1A-214ENST00000497980 SPICE1Q8N0Z3 855 aa29.01■■■□□ 2.23
STX1A-214ENST00000497980 CNMDO75829 334 aa29■■■□□ 2.23
STX1A-214ENST00000497980 CCDC129Q6ZRS4 1044 aa29■■■□□ 2.23
STX1A-214ENST00000497980 GNL3Q9BVP2 549 aaKnown RBP eCLIP29■■■□□ 2.23
STX1A-214ENST00000497980 PORCNQ9H237 461 aa29■■■□□ 2.23
STX1A-214ENST00000497980 ZMYM6O95789 1325 aa28.99■■■□□ 2.23
STX1A-214ENST00000497980 GREB1LQ9C091 1923 aaPredicted RBP28.99■■■□□ 2.23
STX1A-214ENST00000497980 HIP1O00291 1037 aa28.99■■■□□ 2.23
STX1A-214ENST00000497980 TSPY3P0CV98 308 aa28.99■■■□□ 2.23
STX1A-214ENST00000497980 TSPY8P0CW00 308 aa28.99■■■□□ 2.23
STX1A-214ENST00000497980 RGS2P41220 211 aa28.99■■■□□ 2.23
STX1A-214ENST00000497980 POTEEQ6S8J3 1075 aa28.99■■■□□ 2.23
STX1A-214ENST00000497980 STK11IPQ8N1F8 1099 aa28.99■■■□□ 2.23
STX1A-214ENST00000497980 IVNS1ABPQ9Y6Y0 642 aa28.99■■■□□ 2.23
STX1A-214ENST00000497980 A0A0D9SFI3 127 aa28.98■■■□□ 2.23
STX1A-214ENST00000497980 PRDM1O75626 825 aa28.98■■■□□ 2.23
STX1A-214ENST00000497980 DSG3P32926 999 aa28.98■■■□□ 2.23
STX1A-214ENST00000497980 GJA8P48165 433 aa28.98■■■□□ 2.23
STX1A-214ENST00000497980 ALX1Q15699 326 aa28.98■■■□□ 2.23
STX1A-214ENST00000497980 FAM227BQ96M60 508 aa28.98■■■□□ 2.23
STX1A-214ENST00000497980 APBA2Q99767 749 aa28.98■■■□□ 2.23
STX1A-214ENST00000497980 IGKV6D-41A0A0C4DH26 115 aa28.97■■■□□ 2.23
STX1A-214ENST00000497980 PEX10O60683 326 aa28.97■■■□□ 2.23
STX1A-214ENST00000497980 KIAA1755Q5JYT7 1200 aa28.97■■■□□ 2.23
STX1A-214ENST00000497980 BTBD7Q9P203 1132 aa28.97■■■□□ 2.23
STX1A-214ENST00000497980 ANAPC4Q9UJX5 808 aa28.97■■■□□ 2.23
STX1A-214ENST00000497980 CCDC171Q6TFL3 1326 aa28.96■■■□□ 2.23
STX1A-214ENST00000497980 FOXP2O15409 715 aa28.96■■■□□ 2.23
STX1A-214ENST00000497980 TTLL1O95922 423 aa28.96■■■□□ 2.23
STX1A-214ENST00000497980 MORN1Q5T089 497 aa28.96■■■□□ 2.23
STX1A-214ENST00000497980 WDR78Q5VTH9 848 aa28.96■■■□□ 2.23
STX1A-214ENST00000497980 SHCBP1Q8NEM2 672 aa28.96■■■□□ 2.23
STX1A-214ENST00000497980 NEDD1Q8NHV4 660 aa28.96■■■□□ 2.23
STX1A-214ENST00000497980 SPATC1LQ9H0A9 340 aa28.96■■■□□ 2.23
STX1A-214ENST00000497980 BRCA2P51587 3418 aa28.95■■■□□ 2.23
STX1A-214ENST00000497980 SLC15A5A6NIM6 579 aa28.95■■■□□ 2.22
STX1A-214ENST00000497980 RAD21O60216 631 aa28.95■■■□□ 2.22
STX1A-214ENST00000497980 ZKSCAN1P17029 563 aaPredicted RBP28.95■■■□□ 2.22
STX1A-214ENST00000497980 SDSP20132 328 aa28.95■■■□□ 2.22
STX1A-214ENST00000497980 NMIQ13287 307 aaPredicted RBP28.95■■■□□ 2.22
STX1A-214ENST00000497980 UNC93B1Q9H1C4 597 aa28.95■■■□□ 2.22
STX1A-214ENST00000497980 MTMR4Q9NYA4 1195 aa28.95■■■□□ 2.22
STX1A-214ENST00000497980 DOCK3Q8IZD9 2030 aa28.94■■■□□ 2.22
STX1A-214ENST00000497980 CYP2B6P20813 491 aa28.94■■■□□ 2.22
STX1A-214ENST00000497980 IRX6P78412 446 aaPredicted RBP28.94■■■□□ 2.22
STX1A-214ENST00000497980 VPS53Q5VIR6 699 aa28.94■■■□□ 2.22
STX1A-214ENST00000497980 USP6NLQ92738 828 aa28.94■■■□□ 2.22
STX1A-214ENST00000497980 CEP95Q96GE4 821 aa28.94■■■□□ 2.22
STX1A-214ENST00000497980 PAK6Q9NQU5 681 aaPredicted RBP28.94■■■□□ 2.22
STX1A-214ENST00000497980 DIAPH3Q9NSV4 1193 aa28.94■■■□□ 2.22
STX1A-214ENST00000497980 PDE4DIPQ5VU43 2346 aa28.94■■■□□ 2.22
STX1A-214ENST00000497980 A0A0G2JMZ2 1700 aa28.94■■■□□ 2.22
STX1A-214ENST00000497980 MAP2K5Q13163 448 aa28.93■■■□□ 2.22
STX1A-214ENST00000497980 U2AF1L4Q8WU68 220 aaKnown RBP28.93■■■□□ 2.22
STX1A-214ENST00000497980 MKL1Q969V6 931 aa28.93■■■□□ 2.22
STX1A-214ENST00000497980 CLIP2Q9UDT6 1046 aa28.93■■■□□ 2.22
STX1A-214ENST00000497980 PPP1R9AQ9ULJ8 1098 aa28.93■■■□□ 2.22
STX1A-214ENST00000497980 DDX52Q9Y2R4 599 aaKnown RBP eCLIP28.93■■■□□ 2.22
STX1A-214ENST00000497980 STRNO43815 780 aa28.92■■■□□ 2.22
STX1A-214ENST00000497980 HSPD1P10809 573 aaKnown RBP28.92■■■□□ 2.22
STX1A-214ENST00000497980 PTPREP23469 700 aa28.92■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms