RNA–Protein interactions for RNA: ENST00000497703.1

GARNL3-221, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 3

Gene GARNL3, Length 304 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-221ENST00000497703 OSBPL1AQ9BXW6 950 aa10.57□□□□□ -0.72
GARNL3-221ENST00000497703 CCDC113Q9H0I3 377 aa10.57□□□□□ -0.72
GARNL3-221ENST00000497703 PCDHB10Q9UN67 800 aa10.57□□□□□ -0.72
GARNL3-221ENST00000497703 CDK11AQ9UQ88 783 aaPredicted RBP10.57□□□□□ -0.72
GARNL3-221ENST00000497703 GNAT3A8MTJ3 354 aa10.56□□□□□ -0.72
GARNL3-221ENST00000497703 LEFTY1O75610 366 aa10.56□□□□□ -0.72
GARNL3-221ENST00000497703 KIR3DL1P43629 444 aa10.56□□□□□ -0.72
GARNL3-221ENST00000497703 TCEAL1Q15170 157 aa10.56□□□□□ -0.72
GARNL3-221ENST00000497703 SLC51AQ86UW1 340 aa10.56□□□□□ -0.72
GARNL3-221ENST00000497703 ASCC2Q9H1I8 757 aaPredicted RBP10.56□□□□□ -0.72
GARNL3-221ENST00000497703 FAM86C1Q9NVL1 165 aa10.56□□□□□ -0.72
GARNL3-221ENST00000497703 PDPK1O15530 556 aa10.55□□□□□ -0.72
GARNL3-221ENST00000497703 EOMESO95936 686 aa10.55□□□□□ -0.72
GARNL3-221ENST00000497703 TP53P04637 393 aaPredicted RBP10.55□□□□□ -0.72
GARNL3-221ENST00000497703 CPSF6Q16630 551 aaKnown RBP eCLIP10.55□□□□□ -0.72
GARNL3-221ENST00000497703 TDRD10Q5VZ19 366 aaKnown RBP10.55□□□□□ -0.72
GARNL3-221ENST00000497703 HEATR6Q6AI08 1181 aaKnown RBP10.55□□□□□ -0.72
GARNL3-221ENST00000497703 FBXL18Q96ME1 805 aa10.55□□□□□ -0.72
GARNL3-221ENST00000497703 AGRPO00253 132 aa10.54□□□□□ -0.72
GARNL3-221ENST00000497703 IGLV1-40P01703 118 aa10.54□□□□□ -0.72
GARNL3-221ENST00000497703 IGHA1P01876 353 aa10.54□□□□□ -0.72
GARNL3-221ENST00000497703 FSTP19883 344 aa10.54□□□□□ -0.72
GARNL3-221ENST00000497703 ADMP35318 185 aa10.54□□□□□ -0.72
GARNL3-221ENST00000497703 ZNF143P52747 638 aaPredicted RBP10.54□□□□□ -0.72
GARNL3-221ENST00000497703 NBPF12Q5TAG4 269 aaPredicted RBP10.54□□□□□ -0.72
GARNL3-221ENST00000497703 GPAT2Q6NUI2 795 aa10.54□□□□□ -0.72
GARNL3-221ENST00000497703 ZNF765Q7L2R6 523 aa10.54□□□□□ -0.72
GARNL3-221ENST00000497703 ZNF512BQ96KM6 892 aaPredicted RBP10.54□□□□□ -0.72
GARNL3-221ENST00000497703 SPOCK3Q9BQ16 436 aa10.54□□□□□ -0.72
GARNL3-221ENST00000497703 GBP3Q9H0R5 595 aa10.54□□□□□ -0.72
GARNL3-221ENST00000497703 SNTG2Q9NY99 539 aa10.54□□□□□ -0.72
GARNL3-221ENST00000497703 FAM170BA6NMN3 283 aa10.53□□□□□ -0.72
GARNL3-221ENST00000497703 WDR64B1ANS9 1081 aa10.53□□□□□ -0.72
GARNL3-221ENST00000497703 B2RBV5 119 aa10.53□□□□□ -0.72
GARNL3-221ENST00000497703 RASGRF1Q13972 1273 aa10.53□□□□□ -0.72
GARNL3-221ENST00000497703 MTERF2Q49AM1 385 aa10.53□□□□□ -0.72
GARNL3-221ENST00000497703 MICAL1Q8TDZ2 1067 aa10.53□□□□□ -0.72
GARNL3-221ENST00000497703 EPN3Q9H201 632 aa10.53□□□□□ -0.72
GARNL3-221ENST00000497703 FBXL21Q9UKT6 434 aa10.53□□□□□ -0.72
GARNL3-221ENST00000497703 MSRB2Q9Y3D2 182 aa10.53□□□□□ -0.72
GARNL3-221ENST00000497703 PCDHB12Q9Y5F1 795 aa10.53□□□□□ -0.72
GARNL3-221ENST00000497703 SHROOM4Q9ULL8 1493 aa10.53□□□□□ -0.72
GARNL3-221ENST00000497703 ANKRD34BA5PLL1 514 aa10.52□□□□□ -0.73
GARNL3-221ENST00000497703 IGF2BP3O00425 579 aaKnown RBP eCLIP10.52□□□□□ -0.73
GARNL3-221ENST00000497703 CBX7O95931 251 aa10.52□□□□□ -0.73
GARNL3-221ENST00000497703 ITGB2P05107 769 aa10.52□□□□□ -0.73
GARNL3-221ENST00000497703 ADAT2Q7Z6V5 191 aaKnown RBP10.52□□□□□ -0.73
GARNL3-221ENST00000497703 ST13P5Q8NFI4 369 aaPredicted RBP10.52□□□□□ -0.73
GARNL3-221ENST00000497703 GATA6Q92908 595 aa10.52□□□□□ -0.73
GARNL3-221ENST00000497703 APBA2Q99767 749 aa10.52□□□□□ -0.73
GARNL3-221ENST00000497703 HAUS7Q99871 368 aa10.52□□□□□ -0.73
GARNL3-221ENST00000497703 CWC22Q9HCG8 908 aaKnown RBP10.52□□□□□ -0.73
GARNL3-221ENST00000497703 TMA7Q9Y2S6 64 aaKnown RBP10.52□□□□□ -0.73
GARNL3-221ENST00000497703 FAM155AB1AL88 458 aaPredicted RBP10.51□□□□□ -0.73
GARNL3-221ENST00000497703 F13BP05160 661 aa10.51□□□□□ -0.73
GARNL3-221ENST00000497703 AUHQ13825 339 aaKnown RBP10.51□□□□□ -0.73
GARNL3-221ENST00000497703 RASA3Q14644 834 aa10.51□□□□□ -0.73
GARNL3-221ENST00000497703 PPFIBP1Q86W92 1011 aa10.51□□□□□ -0.73
GARNL3-221ENST00000497703 SHKBP1Q8TBC3 707 aa10.51□□□□□ -0.73
GARNL3-221ENST00000497703 KLHL6Q8WZ60 621 aa10.51□□□□□ -0.73
GARNL3-221ENST00000497703 IQCA1LA6NCM1 817 aa10.5□□□□□ -0.73
GARNL3-221ENST00000497703 C9IYK1 514 aa10.5□□□□□ -0.73
GARNL3-221ENST00000497703 PPM1BO75688 479 aa10.5□□□□□ -0.73
GARNL3-221ENST00000497703 NOL9Q5SY16 702 aaKnown RBP10.5□□□□□ -0.73
GARNL3-221ENST00000497703 AXDND1Q5T1B0 1012 aaPredicted RBP10.5□□□□□ -0.73
GARNL3-221ENST00000497703 MFSD4AQ8N468 514 aa10.5□□□□□ -0.73
GARNL3-221ENST00000497703 LEMD3Q9Y2U8 911 aa10.5□□□□□ -0.73
GARNL3-221ENST00000497703 SUSD5O60279 629 aa10.49□□□□□ -0.73
GARNL3-221ENST00000497703 PROCP04070 461 aa10.49□□□□□ -0.73
GARNL3-221ENST00000497703 ITGA4P13612 1032 aa10.49□□□□□ -0.73
GARNL3-221ENST00000497703 ANKRD39Q53RE8 183 aa10.49□□□□□ -0.73
GARNL3-221ENST00000497703 DCAF15Q66K64 600 aa10.49□□□□□ -0.73
GARNL3-221ENST00000497703 C22orf34Q6ZV56 151 aa10.49□□□□□ -0.73
GARNL3-221ENST00000497703 C7orf61Q8IZ16 206 aa10.49□□□□□ -0.73
GARNL3-221ENST00000497703 ZNF669Q96BR6 464 aaPredicted RBP10.49□□□□□ -0.73
GARNL3-221ENST00000497703 PIF1Q9H611 641 aa10.49□□□□□ -0.73
GARNL3-221ENST00000497703 LRRC4CQ9HCJ2 640 aa10.49□□□□□ -0.73
GARNL3-221ENST00000497703 LRP2BPQ9P2M1 347 aa10.49□□□□□ -0.73
GARNL3-221ENST00000497703 SUGT1Q9Y2Z0 365 aa10.49□□□□□ -0.73
GARNL3-221ENST00000497703 NACADO15069 1562 aa10.48□□□□□ -0.73
GARNL3-221ENST00000497703 SV2CQ496J9 727 aa10.48□□□□□ -0.73
GARNL3-221ENST00000497703 PIWIL2Q8TC59 973 aaKnown RBP10.48□□□□□ -0.73
GARNL3-221ENST00000497703 PPP1R14AQ96A00 147 aa10.48□□□□□ -0.73
GARNL3-221ENST00000497703 VWCEQ96DN2 955 aa10.48□□□□□ -0.73
GARNL3-221ENST00000497703 MKNK2Q9HBH9 465 aa10.48□□□□□ -0.73
GARNL3-221ENST00000497703 WHRNQ9P202 907 aa10.48□□□□□ -0.73
GARNL3-221ENST00000497703 EPHX1P07099 455 aa10.47□□□□□ -0.73
GARNL3-221ENST00000497703 ZNF865P0CJ78 1059 aaPredicted RBP10.47□□□□□ -0.73
GARNL3-221ENST00000497703 RSPO4Q2I0M5 234 aaPredicted RBP10.47□□□□□ -0.73
GARNL3-221ENST00000497703 CLEC16AQ2KHT3 1053 aa10.47□□□□□ -0.73
GARNL3-221ENST00000497703 NBPF9Q3BBW0 867 aa10.47□□□□□ -0.73
GARNL3-221ENST00000497703 NKAPLQ5M9Q1 402 aa10.47□□□□□ -0.73
GARNL3-221ENST00000497703 CRACR2BQ8N4Y2 399 aaPredicted RBP10.47□□□□□ -0.73
GARNL3-221ENST00000497703 DTWD2Q8NBA8 298 aa10.47□□□□□ -0.73
GARNL3-221ENST00000497703 HEXIM2Q96MH2 286 aaKnown RBP10.47□□□□□ -0.73
GARNL3-221ENST00000497703 FAM221BA6H8Z2 402 aa10.46□□□□□ -0.73
GARNL3-221ENST00000497703 CYP26A1O43174 497 aa10.46□□□□□ -0.73
GARNL3-221ENST00000497703 DYRK3O43781 588 aa10.46□□□□□ -0.73
GARNL3-221ENST00000497703 ITIH2P19823 946 aa10.46□□□□□ -0.73
GARNL3-221ENST00000497703 CD247P20963 164 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms