RNA–Protein interactions for RNA: ENST00000497539.5

SNRNP200-208, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 1 (best)

Gene SNRNP200, Length 2,666 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-208ENST00000497539 PTPAQ15257 358 aa13.26□□□□□ -0.29
SNRNP200-208ENST00000497539 GRIK5Q16478 980 aa13.26□□□□□ -0.29
SNRNP200-208ENST00000497539 CCDC73Q6ZRK6 1079 aa13.26□□□□□ -0.29
SNRNP200-208ENST00000497539 TMTC3Q6ZXV5 915 aa13.26□□□□□ -0.29
SNRNP200-208ENST00000497539 PLA2G4DQ86XP0 818 aa13.26□□□□□ -0.29
SNRNP200-208ENST00000497539 FMR1NBQ8N0W7 255 aaPredicted RBP13.26□□□□□ -0.29
SNRNP200-208ENST00000497539 FAM177A1Q8N128 213 aaPredicted RBP13.26□□□□□ -0.29
SNRNP200-208ENST00000497539 MASTLQ96GX5 879 aa13.26□□□□□ -0.29
SNRNP200-208ENST00000497539 AIFM3Q96NN9 605 aa13.26□□□□□ -0.29
SNRNP200-208ENST00000497539 STYK1Q6J9G0 422 aa13.25□□□□□ -0.29
SNRNP200-208ENST00000497539 ERCC4Q92889 916 aaPredicted RBP13.25□□□□□ -0.29
SNRNP200-208ENST00000497539 SNED1Q8TER0 1413 aa13.25□□□□□ -0.29
SNRNP200-208ENST00000497539 PLIN4Q96Q06 1357 aa13.25□□□□□ -0.29
SNRNP200-208ENST00000497539 NOP2P46087 812 aaKnown RBP13.25□□□□□ -0.29
SNRNP200-208ENST00000497539 FKBP1AP62942 108 aaKnown RBP13.25□□□□□ -0.29
SNRNP200-208ENST00000497539 STK38Q15208 465 aa13.25□□□□□ -0.29
SNRNP200-208ENST00000497539 NOSTRINQ8IVI9 506 aa13.25□□□□□ -0.29
SNRNP200-208ENST00000497539 CCDC112Q8NEF3 446 aa13.25□□□□□ -0.29
SNRNP200-208ENST00000497539 TRMT1Q9NXH9 659 aaKnown RBP13.25□□□□□ -0.29
SNRNP200-208ENST00000497539 FEZ2Q9UHY8 353 aaPredicted RBP13.25□□□□□ -0.29
SNRNP200-208ENST00000497539 SMTNL1A8MU46 457 aa13.24□□□□□ -0.29
SNRNP200-208ENST00000497539 CYP2D6P10635 497 aa13.24□□□□□ -0.29
SNRNP200-208ENST00000497539 CMA1P23946 247 aa13.24□□□□□ -0.29
SNRNP200-208ENST00000497539 NOVP48745 357 aa13.24□□□□□ -0.29
SNRNP200-208ENST00000497539 RHBDL3P58872 404 aa13.24□□□□□ -0.29
SNRNP200-208ENST00000497539 RCSD1Q6JBY9 416 aa13.24□□□□□ -0.29
SNRNP200-208ENST00000497539 AMOTL1Q8IY63 956 aa13.24□□□□□ -0.29
SNRNP200-208ENST00000497539 JMYQ8N9B5 988 aa13.24□□□□□ -0.29
SNRNP200-208ENST00000497539 GJB4Q9NTQ9 266 aa13.24□□□□□ -0.29
SNRNP200-208ENST00000497539 MCM9Q9NXL9 1143 aa13.24□□□□□ -0.29
SNRNP200-208ENST00000497539 PARP3Q9Y6F1 533 aa13.24□□□□□ -0.29
SNRNP200-208ENST00000497539 GREB1LQ9C091 1923 aaPredicted RBP13.24□□□□□ -0.29
SNRNP200-208ENST00000497539 CNTNAP5Q8WYK1 1306 aa13.24□□□□□ -0.29
SNRNP200-208ENST00000497539 USP5P45974 858 aa13.24□□□□□ -0.29
SNRNP200-208ENST00000497539 ME1P48163 572 aa13.24□□□□□ -0.29
SNRNP200-208ENST00000497539 PKN1Q16512 942 aa13.24□□□□□ -0.29
SNRNP200-208ENST00000497539 ELOA2Q8IYF1 753 aaPredicted RBP13.24□□□□□ -0.29
SNRNP200-208ENST00000497539 GPR101Q96P66 508 aaPredicted RBP13.24□□□□□ -0.29
SNRNP200-208ENST00000497539 PSME4Q14997 1843 aa13.23□□□□□ -0.29
SNRNP200-208ENST00000497539 USP17L8P0C7I0 530 aa13.23□□□□□ -0.29
SNRNP200-208ENST00000497539 GUCY1A2P33402 732 aa13.23□□□□□ -0.29
SNRNP200-208ENST00000497539 BTDP43251 543 aa13.23□□□□□ -0.29
SNRNP200-208ENST00000497539 SAFBQ15424 915 aaKnown RBP eCLIP13.23□□□□□ -0.29
SNRNP200-208ENST00000497539 DIXDC1Q155Q3 683 aa13.23□□□□□ -0.29
SNRNP200-208ENST00000497539 C11orf57Q6ZUT1 292 aaPredicted RBP13.23□□□□□ -0.29
SNRNP200-208ENST00000497539 C16orf86Q6ZW13 317 aa13.23□□□□□ -0.29
SNRNP200-208ENST00000497539 FILIP1Q7Z7B0 1213 aa13.23□□□□□ -0.29
SNRNP200-208ENST00000497539 FSIP1Q8NA03 581 aa13.23□□□□□ -0.29
SNRNP200-208ENST00000497539 ZNF287Q9HBT7 754 aa13.23□□□□□ -0.29
SNRNP200-208ENST00000497539 HPSEQ9Y251 543 aa13.23□□□□□ -0.29
SNRNP200-208ENST00000497539 POLR3DP05423 398 aaPredicted RBP13.23□□□□□ -0.29
SNRNP200-208ENST00000497539 MMP10P09238 476 aa13.23□□□□□ -0.29
SNRNP200-208ENST00000497539 OTUD6BQ8N6M0 293 aa13.23□□□□□ -0.29
SNRNP200-208ENST00000497539 FEZ1Q99689 392 aa13.23□□□□□ -0.29
SNRNP200-208ENST00000497539 PHF20Q9BVI0 1012 aa13.23□□□□□ -0.29
SNRNP200-208ENST00000497539 SLFN14P0C7P3 912 aa13.22□□□□□ -0.29
SNRNP200-208ENST00000497539 RILPL1Q5EBL4 403 aa13.22□□□□□ -0.29
SNRNP200-208ENST00000497539 MFSD14BQ5SR56 506 aa13.22□□□□□ -0.29
SNRNP200-208ENST00000497539 CEP135Q66GS9 1140 aa13.22□□□□□ -0.29
SNRNP200-208ENST00000497539 OGFRQ9NZT2 677 aa13.22□□□□□ -0.29
SNRNP200-208ENST00000497539 MYO3BQ8WXR4 1341 aa13.22□□□□□ -0.29
SNRNP200-208ENST00000497539 KINO60870 393 aaKnown RBP13.22□□□□□ -0.29
SNRNP200-208ENST00000497539 XBP1P17861 261 aa13.22□□□□□ -0.29
SNRNP200-208ENST00000497539 EVX2Q03828 476 aa13.22□□□□□ -0.29
SNRNP200-208ENST00000497539 MRIQ9BWK5 157 aa13.22□□□□□ -0.29
SNRNP200-208ENST00000497539 BRMS1Q9HCU9 246 aa13.22□□□□□ -0.29
SNRNP200-208ENST00000497539 JAG2Q9Y219 1238 aa13.22□□□□□ -0.29
SNRNP200-208ENST00000497539 FLT1P17948 1338 aa13.21□□□□□ -0.29
SNRNP200-208ENST00000497539 CUTAO60888 179 aa13.21□□□□□ -0.29
SNRNP200-208ENST00000497539 PRDM1O75626 825 aa13.21□□□□□ -0.29
SNRNP200-208ENST00000497539 GRM4Q14833 912 aa13.21□□□□□ -0.29
SNRNP200-208ENST00000497539 SF3A1Q15459 793 aaKnown RBP13.21□□□□□ -0.29
SNRNP200-208ENST00000497539 DIS3L2Q8IYB7 885 aaKnown RBP13.21□□□□□ -0.29
SNRNP200-208ENST00000497539 NUP133Q8WUM0 1156 aa13.21□□□□□ -0.29
SNRNP200-208ENST00000497539 EYA3Q99504 573 aa13.21□□□□□ -0.29
SNRNP200-208ENST00000497539 GOLGA6L19H0YKK7 550 aa13.21□□□□□ -0.3
SNRNP200-208ENST00000497539 C6orf229H3BNL8 230 aa13.21□□□□□ -0.3
SNRNP200-208ENST00000497539 KIF5BP33176 963 aa13.21□□□□□ -0.3
SNRNP200-208ENST00000497539 GTF2A1P52655 376 aaPredicted RBP13.21□□□□□ -0.3
SNRNP200-208ENST00000497539 RESP18Q5W5W9 173 aa13.21□□□□□ -0.3
SNRNP200-208ENST00000497539 LRRC8AQ8IWT6 810 aa13.21□□□□□ -0.3
SNRNP200-208ENST00000497539 TNFRSF25Q93038 417 aa13.21□□□□□ -0.3
SNRNP200-208ENST00000497539 SHISA4Q96DD7 197 aa13.21□□□□□ -0.3
SNRNP200-208ENST00000497539 SH3GLB2Q9NR46 395 aa13.21□□□□□ -0.3
SNRNP200-208ENST00000497539 IL17RBQ9NRM6 502 aa13.21□□□□□ -0.3
SNRNP200-208ENST00000497539 DONSONQ9NYP3 566 aa13.21□□□□□ -0.3
SNRNP200-208ENST00000497539 KIF13BQ9NQT8 1826 aa13.21□□□□□ -0.3
SNRNP200-208ENST00000497539 TSPY2A6NKD2 308 aa13.2□□□□□ -0.3
SNRNP200-208ENST00000497539 RASA1P20936 1047 aa13.2□□□□□ -0.3
SNRNP200-208ENST00000497539 STX1AQ16623 288 aa13.2□□□□□ -0.3
SNRNP200-208ENST00000497539 ZNF579Q8NAF0 562 aaKnown RBP13.2□□□□□ -0.3
SNRNP200-208ENST00000497539 CTCFLQ8NI51 663 aaPredicted RBP13.2□□□□□ -0.3
SNRNP200-208ENST00000497539 CAMKK2Q96RR4 588 aa13.2□□□□□ -0.3
SNRNP200-208ENST00000497539 ZNF215Q9UL58 517 aaPredicted RBP13.2□□□□□ -0.3
SNRNP200-208ENST00000497539 DAGLAQ9Y4D2 1042 aa13.2□□□□□ -0.3
SNRNP200-208ENST00000497539 UBE2Q2LH0YL09 131 aa13.2□□□□□ -0.3
SNRNP200-208ENST00000497539 PLEKHA8P1O95397 391 aa13.2□□□□□ -0.3
SNRNP200-208ENST00000497539 SKILP12757 684 aa13.2□□□□□ -0.3
SNRNP200-208ENST00000497539 GNAQP50148 359 aa13.2□□□□□ -0.3
SNRNP200-208ENST00000497539 TOB1P50616 345 aaPredicted RBP13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 92.3 ms