RNA–Protein interactions for RNA: ENST00000497377.5

HLA-B-254, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 917 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-254ENST00000497377 CWC27Q6UX04 472 aaKnown RBP13.64□□□□□ -0.23
HLA-B-254ENST00000497377 ZNF589Q86UQ0 364 aaPredicted RBP13.64□□□□□ -0.23
HLA-B-254ENST00000497377 TNS4Q8IZW8 715 aa13.64□□□□□ -0.23
HLA-B-254ENST00000497377 C12orf42Q96LP6 360 aa13.64□□□□□ -0.23
HLA-B-254ENST00000497377 SH2D4AQ9H788 454 aa13.64□□□□□ -0.23
HLA-B-254ENST00000497377 ANAPC4Q9UJX5 808 aa13.64□□□□□ -0.23
HLA-B-254ENST00000497377 RAD50Q92878 1312 aa13.64□□□□□ -0.23
HLA-B-254ENST00000497377 SMIM22K7EJ46 135 aa13.63□□□□□ -0.23
HLA-B-254ENST00000497377 AKR1B1P15121 316 aa13.63□□□□□ -0.23
HLA-B-254ENST00000497377 RASA1P20936 1047 aa13.63□□□□□ -0.23
HLA-B-254ENST00000497377 OSBPP22059 807 aa13.63□□□□□ -0.23
HLA-B-254ENST00000497377 HOXA7P31268 230 aaPredicted RBP13.63□□□□□ -0.23
HLA-B-254ENST00000497377 PKN2Q16513 984 aaKnown RBP13.63□□□□□ -0.23
HLA-B-254ENST00000497377 VPS53Q5VIR6 699 aa13.63□□□□□ -0.23
HLA-B-254ENST00000497377 C17orf99Q6UX52 265 aa13.63□□□□□ -0.23
HLA-B-254ENST00000497377 CTU1Q7Z7A3 348 aaKnown RBP13.63□□□□□ -0.23
HLA-B-254ENST00000497377 ZNF444Q8N0Y2 327 aaPredicted RBP13.63□□□□□ -0.23
HLA-B-254ENST00000497377 KANSL2Q9H9L4 492 aa13.63□□□□□ -0.23
HLA-B-254ENST00000497377 ARHGEF10LQ9HCE6 1279 aa13.63□□□□□ -0.23
HLA-B-254ENST00000497377 ADGRA2Q96PE1 1338 aa13.63□□□□□ -0.23
HLA-B-254ENST00000497377 GREB1LQ9C091 1923 aaPredicted RBP13.62□□□□□ -0.23
HLA-B-254ENST00000497377 FGAP02671 866 aa13.62□□□□□ -0.23
HLA-B-254ENST00000497377 PCP11498 1178 aaKnown RBP13.62□□□□□ -0.23
HLA-B-254ENST00000497377 ICA1Q05084 483 aa13.62□□□□□ -0.23
HLA-B-254ENST00000497377 KIF22Q14807 665 aa13.62□□□□□ -0.23
HLA-B-254ENST00000497377 TREML2Q5T2D2 321 aa13.62□□□□□ -0.23
HLA-B-254ENST00000497377 EFCAB3Q8N7B9 438 aa13.62□□□□□ -0.23
HLA-B-254ENST00000497377 SMCR8Q8TEV9 937 aaPredicted RBP13.62□□□□□ -0.23
HLA-B-254ENST00000497377 DSCC1Q9BVC3 393 aa13.62□□□□□ -0.23
HLA-B-254ENST00000497377 EMILIN3Q9NT22 766 aa13.62□□□□□ -0.23
HLA-B-254ENST00000497377 PPP4R2Q9NY27 417 aa13.62□□□□□ -0.23
HLA-B-254ENST00000497377 CYP2C8P10632 490 aa13.61□□□□□ -0.23
HLA-B-254ENST00000497377 CHMLP26374 656 aa13.61□□□□□ -0.23
HLA-B-254ENST00000497377 GCLCP48506 637 aaPredicted RBP13.61□□□□□ -0.23
HLA-B-254ENST00000497377 IRX3P78415 501 aaPredicted RBP13.61□□□□□ -0.23
HLA-B-254ENST00000497377 DGKZQ13574 1117 aa13.61□□□□□ -0.23
HLA-B-254ENST00000497377 BMP2KLQ5H9B9 411 aa13.61□□□□□ -0.23
HLA-B-254ENST00000497377 PPP4R3BQ5MIZ7 849 aa13.61□□□□□ -0.23
HLA-B-254ENST00000497377 ACER1Q8TDN7 264 aa13.61□□□□□ -0.23
HLA-B-254ENST00000497377 GTF3C2Q8WUA4 911 aaPredicted RBP13.61□□□□□ -0.23
HLA-B-254ENST00000497377 LPAR1Q92633 364 aa13.61□□□□□ -0.23
HLA-B-254ENST00000497377 ASCC2Q9H1I8 757 aaPredicted RBP13.61□□□□□ -0.23
HLA-B-254ENST00000497377 TMX2Q9Y320 296 aa13.61□□□□□ -0.23
HLA-B-254ENST00000497377 PLIN4Q96Q06 1357 aa13.6□□□□□ -0.23
HLA-B-254ENST00000497377 GNRH1P01148 92 aa13.6□□□□□ -0.23
HLA-B-254ENST00000497377 NT5C2P49902 561 aa13.6□□□□□ -0.23
HLA-B-254ENST00000497377 STK11IPQ8N1F8 1099 aa13.6□□□□□ -0.23
HLA-B-254ENST00000497377 NYAP2Q9P242 653 aa13.6□□□□□ -0.23
HLA-B-254ENST00000497377 CPA4Q9UI42 421 aa13.6□□□□□ -0.23
HLA-B-254ENST00000497377 CTNNA3Q9UI47 895 aa13.6□□□□□ -0.23
HLA-B-254ENST00000497377 SYNPO2Q9UMS6 1093 aa13.6□□□□□ -0.23
HLA-B-254ENST00000497377 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.6□□□□□ -0.23
HLA-B-254ENST00000497377 BOLA1Q9Y3E2 137 aa13.6□□□□□ -0.23
HLA-B-254ENST00000497377 A0A1W2PRG0 241 aa13.59□□□□□ -0.23
HLA-B-254ENST00000497377 USP17L15C9J2P7 530 aa13.59□□□□□ -0.23
HLA-B-254ENST00000497377 USP17L13C9JLJ4 530 aa13.59□□□□□ -0.23
HLA-B-254ENST00000497377 USP17L11C9JVI0 530 aa13.59□□□□□ -0.23
HLA-B-254ENST00000497377 USP17L18D6R9N7 530 aa13.59□□□□□ -0.23
HLA-B-254ENST00000497377 USP17L22D6RA61 530 aa13.59□□□□□ -0.23
HLA-B-254ENST00000497377 USP17L17D6RBQ6 530 aa13.59□□□□□ -0.23
HLA-B-254ENST00000497377 USP17L19D6RCP7 530 aa13.59□□□□□ -0.23
HLA-B-254ENST00000497377 USP17L20D6RJB6 530 aa13.59□□□□□ -0.23
HLA-B-254ENST00000497377 ORC4O43929 436 aa13.59□□□□□ -0.23
HLA-B-254ENST00000497377 FGRP09769 529 aa13.59□□□□□ -0.23
HLA-B-254ENST00000497377 TSPY3P0CV98 308 aa13.59□□□□□ -0.23
HLA-B-254ENST00000497377 TSPY8P0CW00 308 aa13.59□□□□□ -0.23
HLA-B-254ENST00000497377 BCRP11274 1271 aa13.59□□□□□ -0.23
HLA-B-254ENST00000497377 EEF2P13639 858 aaKnown RBP13.59□□□□□ -0.23
HLA-B-254ENST00000497377 VCAM1P19320 739 aa13.59□□□□□ -0.23
HLA-B-254ENST00000497377 LACTBP83111 547 aaPredicted RBP13.59□□□□□ -0.23
HLA-B-254ENST00000497377 USP17L24Q0WX57 530 aa13.59□□□□□ -0.23
HLA-B-254ENST00000497377 ZYXQ15942 572 aaKnown RBP13.59□□□□□ -0.23
HLA-B-254ENST00000497377 SIAH1Q8IUQ4 282 aa13.59□□□□□ -0.23
HLA-B-254ENST00000497377 NEDD1Q8NHV4 660 aa13.59□□□□□ -0.23
HLA-B-254ENST00000497377 CD99L2Q8TCZ2 262 aa13.59□□□□□ -0.23
HLA-B-254ENST00000497377 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.59□□□□□ -0.23
HLA-B-254ENST00000497377 RNF41Q9H4P4 317 aaPredicted RBP13.59□□□□□ -0.23
HLA-B-254ENST00000497377 LAMA4Q16363 1823 aa13.59□□□□□ -0.23
HLA-B-254ENST00000497377 IGKV6D-41A0A0C4DH26 115 aa13.58□□□□□ -0.24
HLA-B-254ENST00000497377 ZNF213O14771 459 aa13.58□□□□□ -0.24
HLA-B-254ENST00000497377 PRDM1O75626 825 aa13.58□□□□□ -0.24
HLA-B-254ENST00000497377 CTDSPL2Q05D32 466 aa13.58□□□□□ -0.24
HLA-B-254ENST00000497377 FAM110CQ1W6H9 321 aa13.58□□□□□ -0.24
HLA-B-254ENST00000497377 MCOLN1Q9GZU1 580 aa13.58□□□□□ -0.24
HLA-B-254ENST00000497377 VCPKMTQ9H867 229 aa13.58□□□□□ -0.24
HLA-B-254ENST00000497377 EFCC1Q9HA90 598 aa13.58□□□□□ -0.24
HLA-B-254ENST00000497377 GOPCQ9HD26 462 aa13.58□□□□□ -0.24
HLA-B-254ENST00000497377 MYH4Q9Y623 1939 aa13.57□□□□□ -0.24
HLA-B-254ENST00000497377 TSPY2A6NKD2 308 aa13.57□□□□□ -0.24
HLA-B-254ENST00000497377 SGSM2O43147 1006 aa13.57□□□□□ -0.24
HLA-B-254ENST00000497377 TTLL1O95922 423 aa13.57□□□□□ -0.24
HLA-B-254ENST00000497377 HOXD10P28358 340 aa13.57□□□□□ -0.24
HLA-B-254ENST00000497377 PRMT2P55345 433 aa13.57□□□□□ -0.24
HLA-B-254ENST00000497377 HERVK_113P62684 666 aa13.57□□□□□ -0.24
HLA-B-254ENST00000497377 TFAP4Q01664 338 aa13.57□□□□□ -0.24
HLA-B-254ENST00000497377 ATP2B2Q01814 1243 aa13.57□□□□□ -0.24
HLA-B-254ENST00000497377 IMMTQ16891 758 aaKnown RBP13.57□□□□□ -0.24
HLA-B-254ENST00000497377 AKNAD1Q5T1N1 836 aa13.57□□□□□ -0.24
HLA-B-254ENST00000497377 FBXO46Q6PJ61 603 aaPredicted RBP13.57□□□□□ -0.24
HLA-B-254ENST00000497377 CATSPERGQ6ZRH7 1159 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms