RNA–Protein interactions for RNA: ENST00000497327.1

GGPS1-208, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 3

Gene GGPS1, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-208ENST00000497327 PLA2R1Q13018 1463 aa7.66□□□□□ -1.18
GGPS1-208ENST00000497327 DIP2CQ9Y2E4 1556 aa7.66□□□□□ -1.18
GGPS1-208ENST00000497327 ATP10AO60312 1499 aa7.65□□□□□ -1.18
GGPS1-208ENST00000497327 DEPDC5O75140 1603 aa7.65□□□□□ -1.18
GGPS1-208ENST00000497327 ATP2B2Q01814 1243 aa7.65□□□□□ -1.18
GGPS1-208ENST00000497327 SLBPQ14493 270 aaKnown RBP eCLIP7.65□□□□□ -1.18
GGPS1-208ENST00000497327 ZNF648Q5T619 568 aaPredicted RBP7.65□□□□□ -1.18
GGPS1-208ENST00000497327 RPRD2Q5VT52 1461 aaKnown RBP7.65□□□□□ -1.18
GGPS1-208ENST00000497327 IQGAP3Q86VI3 1631 aa7.65□□□□□ -1.18
GGPS1-208ENST00000497327 ABCA6Q8N139 1617 aa7.65□□□□□ -1.18
GGPS1-208ENST00000497327 MROH1Q8NDA8 1641 aa7.65□□□□□ -1.18
GGPS1-208ENST00000497327 FLAD1Q8NFF5 587 aa7.65□□□□□ -1.18
GGPS1-208ENST00000497327 ELMO3Q96BJ8 720 aa7.65□□□□□ -1.18
GGPS1-208ENST00000497327 PLPPR2Q96GM1 343 aa7.65□□□□□ -1.18
GGPS1-208ENST00000497327 PITPNM2Q9BZ72 1349 aa7.65□□□□□ -1.18
GGPS1-208ENST00000497327 CNTNAP4Q9C0A0 1308 aa7.65□□□□□ -1.18
GGPS1-208ENST00000497327 PICK1Q9NRD5 415 aa7.65□□□□□ -1.18
GGPS1-208ENST00000497327 EIF2AK4Q9P2K8 1649 aaKnown RBP7.65□□□□□ -1.18
GGPS1-208ENST00000497327 PRDM15P57071 1507 aaPredicted RBP7.64□□□□□ -1.19
GGPS1-208ENST00000497327 LMTK2Q8IWU2 1503 aa7.64□□□□□ -1.19
GGPS1-208ENST00000497327 LRIG2O94898 1065 aa7.64□□□□□ -1.19
GGPS1-208ENST00000497327 SLITRK5O94991 958 aa7.64□□□□□ -1.19
GGPS1-208ENST00000497327 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.64□□□□□ -1.19
GGPS1-208ENST00000497327 SV2BQ7L1I2 683 aa7.64□□□□□ -1.19
GGPS1-208ENST00000497327 KCT2Q8NC54 265 aa7.64□□□□□ -1.19
GGPS1-208ENST00000497327 ZNF507Q8TCN5 953 aa7.64□□□□□ -1.19
GGPS1-208ENST00000497327 ASB11Q8WXH4 323 aa7.64□□□□□ -1.19
GGPS1-208ENST00000497327 BCORL1Q5H9F3 1711 aa7.64□□□□□ -1.19
GGPS1-208ENST00000497327 PTPRTO14522 1441 aa7.63□□□□□ -1.19
GGPS1-208ENST00000497327 CAP2P40123 477 aa7.63□□□□□ -1.19
GGPS1-208ENST00000497327 CDK8P49336 464 aa7.63□□□□□ -1.19
GGPS1-208ENST00000497327 CLCN7P51798 805 aa7.63□□□□□ -1.19
GGPS1-208ENST00000497327 CDC37L1Q7L3B6 337 aa7.63□□□□□ -1.19
GGPS1-208ENST00000497327 TMEM40Q8WWA1 233 aa7.63□□□□□ -1.19
GGPS1-208ENST00000497327 PRDM5Q9NQX1 630 aaPredicted RBP7.63□□□□□ -1.19
GGPS1-208ENST00000497327 MAPK8IP1Q9UQF2 711 aa7.63□□□□□ -1.19
GGPS1-208ENST00000497327 TSPOAP1O95153 1857 aa7.63□□□□□ -1.19
GGPS1-208ENST00000497327 RNF17Q9BXT8 1623 aaKnown RBP7.63□□□□□ -1.19
GGPS1-208ENST00000497327 REREQ9P2R6 1566 aa7.63□□□□□ -1.19
GGPS1-208ENST00000497327 AGLP35573 1532 aa7.62□□□□□ -1.19
GGPS1-208ENST00000497327 KANK1Q14678 1352 aa7.62□□□□□ -1.19
GGPS1-208ENST00000497327 TONSLQ96HA7 1378 aa7.62□□□□□ -1.19
GGPS1-208ENST00000497327 PRAMEF27A3QJZ7 478 aa7.62□□□□□ -1.19
GGPS1-208ENST00000497327 PRR33A8MZF0 331 aa7.62□□□□□ -1.19
GGPS1-208ENST00000497327 RBAK-RBAKDNI3L0D1 243 aa7.62□□□□□ -1.19
GGPS1-208ENST00000497327 LDHBP07195 334 aaKnown RBP7.62□□□□□ -1.19
GGPS1-208ENST00000497327 IKZF1Q13422 519 aa7.62□□□□□ -1.19
GGPS1-208ENST00000497327 NKG7Q16617 165 aa7.62□□□□□ -1.19
GGPS1-208ENST00000497327 C22orf34Q6ZV56 151 aa7.62□□□□□ -1.19
GGPS1-208ENST00000497327 FOXQ1Q9C009 403 aa7.62□□□□□ -1.19
GGPS1-208ENST00000497327 WNT10AQ9GZT5 417 aa7.62□□□□□ -1.19
GGPS1-208ENST00000497327 ZP2Q05996 745 aa7.61□□□□□ -1.19
GGPS1-208ENST00000497327 FRMD6Q96NE9 622 aa7.61□□□□□ -1.19
GGPS1-208ENST00000497327 SEMA3GQ9NS98 782 aa7.61□□□□□ -1.19
GGPS1-208ENST00000497327 RNF19AQ9NV58 838 aa7.61□□□□□ -1.19
GGPS1-208ENST00000497327 TTF2Q9UNY4 1162 aaKnown RBP7.61□□□□□ -1.19
GGPS1-208ENST00000497327 ARID1BQ8NFD5 2236 aaPredicted RBP7.61□□□□□ -1.19
GGPS1-208ENST00000497327 GNAT3A8MTJ3 354 aa7.6□□□□□ -1.19
GGPS1-208ENST00000497327 ZNF865P0CJ78 1059 aaPredicted RBP7.6□□□□□ -1.19
GGPS1-208ENST00000497327 GNA15P30679 374 aa7.6□□□□□ -1.19
GGPS1-208ENST00000497327 WIPI1Q5MNZ9 446 aaPredicted RBP7.6□□□□□ -1.19
GGPS1-208ENST00000497327 TTBK2Q6IQ55 1244 aa7.6□□□□□ -1.19
GGPS1-208ENST00000497327 GGT6Q6P531 493 aa7.6□□□□□ -1.19
GGPS1-208ENST00000497327 HDXQ7Z353 690 aa7.6□□□□□ -1.19
GGPS1-208ENST00000497327 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.6□□□□□ -1.19
GGPS1-208ENST00000497327 CTNND2Q9UQB3 1225 aa7.6□□□□□ -1.19
GGPS1-208ENST00000497327 SNCAIPQ9Y6H5 919 aa7.6□□□□□ -1.19
GGPS1-208ENST00000497327 ABCC3O15438 1527 aa7.59□□□□□ -1.19
GGPS1-208ENST00000497327 ZNF124Q15973 351 aa7.59□□□□□ -1.19
GGPS1-208ENST00000497327 LCE1DQ5T752 114 aa7.59□□□□□ -1.19
GGPS1-208ENST00000497327 RIN3Q8TB24 985 aa7.59□□□□□ -1.19
GGPS1-208ENST00000497327 MIPEPQ99797 713 aa7.59□□□□□ -1.19
GGPS1-208ENST00000497327 PCDHB5Q9Y5E4 795 aa7.59□□□□□ -1.19
GGPS1-208ENST00000497327 TET3O43151 1660 aa7.59□□□□□ -1.19
GGPS1-208ENST00000497327 ARHGAP31Q2M1Z3 1444 aa7.59□□□□□ -1.19
GGPS1-208ENST00000497327 ARHGEF40Q8TER5 1519 aa7.58□□□□□ -1.2
GGPS1-208ENST00000497327 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.58□□□□□ -1.2
GGPS1-208ENST00000497327 GFRA2O00451 464 aa7.58□□□□□ -1.2
GGPS1-208ENST00000497327 EIF4BP23588 611 aaKnown RBP7.58□□□□□ -1.2
GGPS1-208ENST00000497327 MESP2Q0VG99 397 aa7.58□□□□□ -1.2
GGPS1-208ENST00000497327 NBPF8Q3BBV2 869 aa7.58□□□□□ -1.2
GGPS1-208ENST00000497327 ZSWIM9Q86XI8 627 aa7.58□□□□□ -1.2
GGPS1-208ENST00000497327 HSPA12BQ96MM6 686 aa7.58□□□□□ -1.2
GGPS1-208ENST00000497327 ATP13A1Q9HD20 1204 aa7.58□□□□□ -1.2
GGPS1-208ENST00000497327 LMCD1Q9NZU5 365 aa7.58□□□□□ -1.2
GGPS1-208ENST00000497327 CCDC144AA2RUR9 1427 aa7.58□□□□□ -1.2
GGPS1-208ENST00000497327 NPATQ14207 1427 aa7.58□□□□□ -1.2
GGPS1-208ENST00000497327 EFCAB6Q5THR3 1501 aa7.57□□□□□ -1.2
GGPS1-208ENST00000497327 E9PCH4 1651 aa7.57□□□□□ -1.2
GGPS1-208ENST00000497327 WASHC2CQ9Y4E1 1318 aa7.57□□□□□ -1.2
GGPS1-208ENST00000497327 ZNF503-AS2A6NEH8 195 aa7.57□□□□□ -1.2
GGPS1-208ENST00000497327 PRPF40AO75400 957 aaKnown RBP7.57□□□□□ -1.2
GGPS1-208ENST00000497327 FARP2O94887 1054 aaPredicted RBP7.57□□□□□ -1.2
GGPS1-208ENST00000497327 CST3P01034 146 aaPredicted RBP7.57□□□□□ -1.2
GGPS1-208ENST00000497327 RPS26P62854 115 aaKnown RBP7.57□□□□□ -1.2
GGPS1-208ENST00000497327 SEPT6Q14141 434 aa7.57□□□□□ -1.2
GGPS1-208ENST00000497327 SFRP5Q5T4F7 317 aa7.57□□□□□ -1.2
GGPS1-208ENST00000497327 FYB2Q5VWT5 728 aa7.57□□□□□ -1.2
GGPS1-208ENST00000497327 HID1Q8IV36 788 aa7.57□□□□□ -1.2
GGPS1-208ENST00000497327 MFSD4AQ8N468 514 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms