RNA–Protein interactions for RNA: ENST00000496514.5

PDE6B-212, Transcript of phosphodiesterase 6B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDE6B, Length 3,232 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6B-212ENST00000496514 FNBP4Q8N3X1 1017 aaPredicted RBP14.07□□□□□ -0.16
PDE6B-212ENST00000496514 SMARCE1Q969G3 411 aa14.07□□□□□ -0.16
PDE6B-212ENST00000496514 MED15Q96RN5 788 aa14.07□□□□□ -0.16
PDE6B-212ENST00000496514 NFE2L3Q9Y4A8 694 aa14.07□□□□□ -0.16
PDE6B-212ENST00000496514 DYNC1I1O14576 645 aa14.06□□□□□ -0.16
PDE6B-212ENST00000496514 RAD21O60216 631 aa14.06□□□□□ -0.16
PDE6B-212ENST00000496514 TPM4P67936 248 aa14.06□□□□□ -0.16
PDE6B-212ENST00000496514 TTC38Q5R3I4 469 aa14.06□□□□□ -0.16
PDE6B-212ENST00000496514 CPLX3Q8WVH0 158 aa14.06□□□□□ -0.16
PDE6B-212ENST00000496514 PRPF3O43395 683 aaKnown RBP14.06□□□□□ -0.16
PDE6B-212ENST00000496514 SFPQP23246 707 aaKnown RBP eCLIP14.06□□□□□ -0.16
PDE6B-212ENST00000496514 SLC35G1Q2M3R5 365 aa14.06□□□□□ -0.16
PDE6B-212ENST00000496514 MSL1Q68DK7 614 aa14.06□□□□□ -0.16
PDE6B-212ENST00000496514 COL5A3P25940 1745 aaPredicted RBP14.06□□□□□ -0.16
PDE6B-212ENST00000496514 BTAF1O14981 1849 aa14.06□□□□□ -0.16
PDE6B-212ENST00000496514 HSPA1LP34931 641 aa14.05□□□□□ -0.16
PDE6B-212ENST00000496514 ADKP55263 362 aaKnown RBP14.05□□□□□ -0.16
PDE6B-212ENST00000496514 MDM2Q00987 491 aaPredicted RBP14.05□□□□□ -0.16
PDE6B-212ENST00000496514 PPP4R3BQ5MIZ7 849 aa14.05□□□□□ -0.16
PDE6B-212ENST00000496514 MFSD14BQ5SR56 506 aa14.05□□□□□ -0.16
PDE6B-212ENST00000496514 RC3H1Q5TC82 1133 aaKnown RBP14.05□□□□□ -0.16
PDE6B-212ENST00000496514 CEP135Q66GS9 1140 aa14.05□□□□□ -0.16
PDE6B-212ENST00000496514 SRPRBQ9Y5M8 271 aaKnown RBP14.05□□□□□ -0.16
PDE6B-212ENST00000496514 TNRC6CQ9HCJ0 1690 aaKnown RBP14.05□□□□□ -0.16
PDE6B-212ENST00000496514 DUOX1Q9NRD9 1551 aa14.05□□□□□ -0.16
PDE6B-212ENST00000496514 MYH6P13533 1939 aa14.05□□□□□ -0.16
PDE6B-212ENST00000496514 SMTNL1A8MU46 457 aa14.05□□□□□ -0.16
PDE6B-212ENST00000496514 ACTN4O43707 911 aaKnown RBP14.05□□□□□ -0.16
PDE6B-212ENST00000496514 SCG2P13521 617 aa14.05□□□□□ -0.16
PDE6B-212ENST00000496514 GYS1P13807 737 aa14.05□□□□□ -0.16
PDE6B-212ENST00000496514 CDC25BP30305 580 aa14.05□□□□□ -0.16
PDE6B-212ENST00000496514 DOK7Q18PE1 504 aa14.05□□□□□ -0.16
PDE6B-212ENST00000496514 USP17L2Q6R6M4 530 aa14.05□□□□□ -0.16
PDE6B-212ENST00000496514 ZNF444Q8N0Y2 327 aaPredicted RBP14.05□□□□□ -0.16
PDE6B-212ENST00000496514 UBA5Q9GZZ9 404 aa14.05□□□□□ -0.16
PDE6B-212ENST00000496514 INTS13Q9NVM9 706 aa14.05□□□□□ -0.16
PDE6B-212ENST00000496514 POLLQ9UGP5 575 aa14.05□□□□□ -0.16
PDE6B-212ENST00000496514 CD44P16070 742 aaKnown RBP14.05□□□□□ -0.16
PDE6B-212ENST00000496514 SCNN1DP51172 638 aa14.05□□□□□ -0.16
PDE6B-212ENST00000496514 GTF2IP78347 998 aa14.05□□□□□ -0.16
PDE6B-212ENST00000496514 C12orf60Q5U649 245 aa14.05□□□□□ -0.16
PDE6B-212ENST00000496514 PRIMPOLQ96LW4 560 aa14.05□□□□□ -0.16
PDE6B-212ENST00000496514 CD209Q9NNX6 404 aa14.05□□□□□ -0.16
PDE6B-212ENST00000496514 ATP8A2Q9NTI2 1148 aa14.05□□□□□ -0.16
PDE6B-212ENST00000496514 LAMB2P55268 1798 aa14.05□□□□□ -0.16
PDE6B-212ENST00000496514 PTPN14Q15678 1187 aa14.04□□□□□ -0.16
PDE6B-212ENST00000496514 IL17AQ16552 155 aa14.04□□□□□ -0.16
PDE6B-212ENST00000496514 RASSF8Q8NHQ8 419 aa14.04□□□□□ -0.16
PDE6B-212ENST00000496514 ARPP21Q9UBL0 812 aaPredicted RBP14.04□□□□□ -0.16
PDE6B-212ENST00000496514 SPDYE4A6NLX3 237 aa14.04□□□□□ -0.16
PDE6B-212ENST00000496514 DDR1Q08345 913 aa14.04□□□□□ -0.16
PDE6B-212ENST00000496514 DHX8Q14562 1220 aaKnown RBP14.04□□□□□ -0.16
PDE6B-212ENST00000496514 E4F1Q66K89 784 aaPredicted RBP14.04□□□□□ -0.16
PDE6B-212ENST00000496514 TEX11Q8IYF3 940 aa14.04□□□□□ -0.16
PDE6B-212ENST00000496514 TIGD1Q96MW7 591 aa14.04□□□□□ -0.16
PDE6B-212ENST00000496514 TIAM2Q8IVF5 1701 aa14.04□□□□□ -0.16
PDE6B-212ENST00000496514 CYTH3O43739 400 aa14.03□□□□□ -0.16
PDE6B-212ENST00000496514 INF2Q27J81 1249 aa14.03□□□□□ -0.16
PDE6B-212ENST00000496514 NOL10Q9BSC4 688 aaKnown RBP14.03□□□□□ -0.16
PDE6B-212ENST00000496514 BRMS1Q9HCU9 246 aa14.03□□□□□ -0.16
PDE6B-212ENST00000496514 CASZ1Q86V15 1759 aa14.03□□□□□ -0.16
PDE6B-212ENST00000496514 XDHP47989 1333 aa14.03□□□□□ -0.16
PDE6B-212ENST00000496514 FRMPD2Q68DX3 1309 aaPredicted RBP14.03□□□□□ -0.16
PDE6B-212ENST00000496514 ATP2B2Q01814 1243 aa14.03□□□□□ -0.16
PDE6B-212ENST00000496514 KARSQ15046 597 aaKnown RBP14.03□□□□□ -0.16
PDE6B-212ENST00000496514 ZNF804AQ7Z570 1209 aa14.03□□□□□ -0.16
PDE6B-212ENST00000496514 CCAR2Q8N163 923 aaKnown RBP14.03□□□□□ -0.16
PDE6B-212ENST00000496514 TERF1P54274 439 aa14.03□□□□□ -0.16
PDE6B-212ENST00000496514 DPYDQ12882 1025 aa14.03□□□□□ -0.16
PDE6B-212ENST00000496514 SYT10Q6XYQ8 523 aa14.03□□□□□ -0.16
PDE6B-212ENST00000496514 LRRN4CLQ8ND94 238 aa14.03□□□□□ -0.16
PDE6B-212ENST00000496514 ZBTB9Q96C00 473 aa14.03□□□□□ -0.16
PDE6B-212ENST00000496514 FAM196BA6NMK8 535 aa14.02□□□□□ -0.16
PDE6B-212ENST00000496514 TEX33O43247 280 aa14.02□□□□□ -0.16
PDE6B-212ENST00000496514 TOP1P11387 765 aaKnown RBP14.02□□□□□ -0.16
PDE6B-212ENST00000496514 CACNB3P54284 484 aa14.02□□□□□ -0.16
PDE6B-212ENST00000496514 PAGE5Q96GU1 130 aa14.02□□□□□ -0.16
PDE6B-212ENST00000496514 TMEM47Q9BQJ4 181 aa14.02□□□□□ -0.16
PDE6B-212ENST00000496514 RBM28Q9NW13 759 aaKnown RBP14.02□□□□□ -0.16
PDE6B-212ENST00000496514 GGA1Q9UJY5 639 aa14.02□□□□□ -0.16
PDE6B-212ENST00000496514 PCDHAC2Q9Y5I4 1007 aa14.02□□□□□ -0.16
PDE6B-212ENST00000496514 TULP1O00294 542 aaPredicted RBP14.02□□□□□ -0.17
PDE6B-212ENST00000496514 SEMA3EO15041 775 aa14.02□□□□□ -0.17
PDE6B-212ENST00000496514 ORC4O43929 436 aa14.02□□□□□ -0.17
PDE6B-212ENST00000496514 DDAH1O94760 285 aa14.02□□□□□ -0.17
PDE6B-212ENST00000496514 LRRC47Q8N1G4 583 aaKnown RBP14.02□□□□□ -0.17
PDE6B-212ENST00000496514 CCDC112Q8NEF3 446 aa14.02□□□□□ -0.17
PDE6B-212ENST00000496514 WDR66Q8TBY9 1149 aa14.02□□□□□ -0.17
PDE6B-212ENST00000496514 IRS2Q9Y4H2 1338 aa14.02□□□□□ -0.17
PDE6B-212ENST00000496514 CUL4BQ13620 913 aa14.02□□□□□ -0.17
PDE6B-212ENST00000496514 WWC2Q6AWC2 1192 aa14.02□□□□□ -0.17
PDE6B-212ENST00000496514 DESI2Q9BSY9 194 aa14.02□□□□□ -0.17
PDE6B-212ENST00000496514 TMEM60Q9H2L4 133 aa14.02□□□□□ -0.17
PDE6B-212ENST00000496514 KCNQ5Q9NR82 932 aa14.02□□□□□ -0.17
PDE6B-212ENST00000496514 CEP131Q9UPN4 1083 aa14.02□□□□□ -0.17
PDE6B-212ENST00000496514 SCN7AQ01118 1682 aa14.01□□□□□ -0.17
PDE6B-212ENST00000496514 RREB1Q92766 1687 aa14.01□□□□□ -0.17
PDE6B-212ENST00000496514 CCT6AP40227 531 aaKnown RBP14.01□□□□□ -0.17
PDE6B-212ENST00000496514 SPTY2D1Q68D10 685 aaPredicted RBP14.01□□□□□ -0.17
PDE6B-212ENST00000496514 TNFRSF25Q93038 417 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms