RNA–Protein interactions for RNA: ENST00000496489.5

NCK1-212, Transcript of NCK adaptor protein 1, humanhuman

TSL 3

Gene NCK1, Length 422 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1-212ENST00000496489 PPFIBP1Q86W92 1011 aa4.29□□□□□ -1.72
NCK1-212ENST00000496489 MICAL1Q8TDZ2 1067 aa4.29□□□□□ -1.72
NCK1-212ENST00000496489 GATA6Q92908 595 aa4.29□□□□□ -1.72
NCK1-212ENST00000496489 DHRS1Q96LJ7 313 aa4.29□□□□□ -1.72
NCK1-212ENST00000496489 KREMEN1Q96MU8 473 aa4.29□□□□□ -1.72
NCK1-212ENST00000496489 KRTAP4-12Q9BQ66 201 aa4.29□□□□□ -1.72
NCK1-212ENST00000496489 DBNDD2Q9BQY9 259 aa4.29□□□□□ -1.72
NCK1-212ENST00000496489 ZSWIM4Q9H7M6 989 aa4.29□□□□□ -1.72
NCK1-212ENST00000496489 SUCOQ9UBS9 1254 aaKnown RBP4.29□□□□□ -1.72
NCK1-212ENST00000496489 ZNF214Q9UL59 606 aaPredicted RBP4.29□□□□□ -1.72
NCK1-212ENST00000496489 CEP131Q9UPN4 1083 aa4.29□□□□□ -1.72
NCK1-212ENST00000496489 COL17A1Q9UMD9 1497 aaPredicted RBP4.29□□□□□ -1.72
NCK1-212ENST00000496489 WDR64B1ANS9 1081 aa4.28□□□□□ -1.72
NCK1-212ENST00000496489 CBX7O95931 251 aa4.28□□□□□ -1.72
NCK1-212ENST00000496489 EOMESO95936 686 aa4.28□□□□□ -1.72
NCK1-212ENST00000496489 F13BP05160 661 aa4.28□□□□□ -1.72
NCK1-212ENST00000496489 ITIH2P19823 946 aa4.28□□□□□ -1.72
NCK1-212ENST00000496489 CYP7A1P22680 504 aa4.28□□□□□ -1.72
NCK1-212ENST00000496489 CD97P48960 835 aa4.28□□□□□ -1.72
NCK1-212ENST00000496489 RNF4P78317 190 aa4.28□□□□□ -1.72
NCK1-212ENST00000496489 SLC7A5Q01650 507 aa4.28□□□□□ -1.72
NCK1-212ENST00000496489 CYP27A1Q02318 531 aa4.28□□□□□ -1.72
NCK1-212ENST00000496489 BBS9Q3SYG4 887 aa4.28□□□□□ -1.72
NCK1-212ENST00000496489 GNPTABQ3T906 1256 aa4.28□□□□□ -1.72
NCK1-212ENST00000496489 CYP27C1Q4G0S4 372 aa4.28□□□□□ -1.72
NCK1-212ENST00000496489 LCE3BQ5TA77 95 aa4.28□□□□□ -1.72
NCK1-212ENST00000496489 DUSP27Q5VZP5 1158 aa4.28□□□□□ -1.72
NCK1-212ENST00000496489 MCTP1Q6DN14 999 aa4.28□□□□□ -1.72
NCK1-212ENST00000496489 KIAA1211LQ6NV74 962 aa4.28□□□□□ -1.72
NCK1-212ENST00000496489 OGFOD3Q6PK18 319 aa4.28□□□□□ -1.72
NCK1-212ENST00000496489 ARHGAP27Q6ZUM4 889 aa4.28□□□□□ -1.72
NCK1-212ENST00000496489 FAM178BQ8IXR5 827 aa4.28□□□□□ -1.72
NCK1-212ENST00000496489 CCDC144CPQ8IYA2 1237 aa4.28□□□□□ -1.72
NCK1-212ENST00000496489 FAM181AQ8N9Y4 354 aa4.28□□□□□ -1.72
NCK1-212ENST00000496489 SHKBP1Q8TBC3 707 aa4.28□□□□□ -1.72
NCK1-212ENST00000496489 ASPNQ9BXN1 380 aa4.28□□□□□ -1.72
NCK1-212ENST00000496489 OSBPL1AQ9BXW6 950 aa4.28□□□□□ -1.72
NCK1-212ENST00000496489 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP4.28□□□□□ -1.72
NCK1-212ENST00000496489 LRRC4CQ9HCJ2 640 aa4.28□□□□□ -1.72
NCK1-212ENST00000496489 ATG3Q9NT62 314 aa4.28□□□□□ -1.72
NCK1-212ENST00000496489 SIRPGQ9P1W8 387 aa4.28□□□□□ -1.72
NCK1-212ENST00000496489 GTF2IRD1Q9UHL9 959 aa4.28□□□□□ -1.72
NCK1-212ENST00000496489 GNAT3A8MTJ3 354 aa4.27□□□□□ -1.73
NCK1-212ENST00000496489 C9IYK1 514 aa4.27□□□□□ -1.73
NCK1-212ENST00000496489 RBAK-RBAKDNI3L0D1 243 aa4.27□□□□□ -1.73
NCK1-212ENST00000496489 PAX4O43316 350 aa4.27□□□□□ -1.73
NCK1-212ENST00000496489 MED26O95402 600 aa4.27□□□□□ -1.73
NCK1-212ENST00000496489 NCAPHQ15003 741 aa4.27□□□□□ -1.73
NCK1-212ENST00000496489 SFRP5Q5T4F7 317 aa4.27□□□□□ -1.73
NCK1-212ENST00000496489 MFSD4AQ8N468 514 aa4.27□□□□□ -1.73
NCK1-212ENST00000496489 RNF141Q8WVD5 230 aa4.27□□□□□ -1.73
NCK1-212ENST00000496489 KLHL6Q8WZ60 621 aa4.27□□□□□ -1.73
NCK1-212ENST00000496489 DEPDC7Q96QD5 511 aa4.27□□□□□ -1.73
NCK1-212ENST00000496489 SRPK1Q96SB4 655 aaKnown RBP4.27□□□□□ -1.73
NCK1-212ENST00000496489 METTL22Q9BUU2 404 aaPredicted RBP4.27□□□□□ -1.73
NCK1-212ENST00000496489 GOLGA2P5Q9HBQ8 144 aa4.27□□□□□ -1.73
NCK1-212ENST00000496489 CNTNAP4Q9C0A0 1308 aa4.26□□□□□ -1.73
NCK1-212ENST00000496489 LRRN2O75325 713 aa4.26□□□□□ -1.73
NCK1-212ENST00000496489 TGFB1P01137 390 aa4.26□□□□□ -1.73
NCK1-212ENST00000496489 GRIK1P39086 918 aa4.26□□□□□ -1.73
NCK1-212ENST00000496489 TXKP42681 527 aa4.26□□□□□ -1.73
NCK1-212ENST00000496489 IRAK1P51617 712 aa4.26□□□□□ -1.73
NCK1-212ENST00000496489 NFE2L2Q16236 605 aa4.26□□□□□ -1.73
NCK1-212ENST00000496489 AXDND1Q5T1B0 1012 aaPredicted RBP4.26□□□□□ -1.73
NCK1-212ENST00000496489 NBPF12Q5TAG4 269 aaPredicted RBP4.26□□□□□ -1.73
NCK1-212ENST00000496489 DCAF15Q66K64 600 aa4.26□□□□□ -1.73
NCK1-212ENST00000496489 MRM1Q6IN84 353 aaKnown RBP4.26□□□□□ -1.73
NCK1-212ENST00000496489 INTS5Q6P9B9 1019 aaKnown RBP4.26□□□□□ -1.73
NCK1-212ENST00000496489 SMARCC1Q92922 1105 aaPredicted RBP4.26□□□□□ -1.73
NCK1-212ENST00000496489 MRFAP1L1Q96HT8 127 aa4.26□□□□□ -1.73
NCK1-212ENST00000496489 HEXIM2Q96MH2 286 aaKnown RBP4.26□□□□□ -1.73
NCK1-212ENST00000496489 HAUS7Q99871 368 aa4.26□□□□□ -1.73
NCK1-212ENST00000496489 PIF1Q9H611 641 aa4.26□□□□□ -1.73
NCK1-212ENST00000496489 SNTG2Q9NY99 539 aa4.26□□□□□ -1.73
NCK1-212ENST00000496489 U3KQE9 123 aa4.26□□□□□ -1.73
NCK1-212ENST00000496489 PRR33A8MZF0 331 aa4.25□□□□□ -1.73
NCK1-212ENST00000496489 FAM155AB1AL88 458 aaPredicted RBP4.25□□□□□ -1.73
NCK1-212ENST00000496489 KIR3DL1P43629 444 aa4.25□□□□□ -1.73
NCK1-212ENST00000496489 RASA3Q14644 834 aa4.25□□□□□ -1.73
NCK1-212ENST00000496489 HEATR6Q6AI08 1181 aaKnown RBP4.25□□□□□ -1.73
NCK1-212ENST00000496489 EEPD1Q7L9B9 569 aa4.25□□□□□ -1.73
NCK1-212ENST00000496489 ZDHHC13Q8IUH4 622 aa4.25□□□□□ -1.73
NCK1-212ENST00000496489 PPP1R14AQ96A00 147 aa4.25□□□□□ -1.73
NCK1-212ENST00000496489 COX4I2Q96KJ9 171 aa4.25□□□□□ -1.73
NCK1-212ENST00000496489 GBP3Q9H0R5 595 aa4.25□□□□□ -1.73
NCK1-212ENST00000496489 FBXL21Q9UKT6 434 aa4.25□□□□□ -1.73
NCK1-212ENST00000496489 CDK11AQ9UQ88 783 aaPredicted RBP4.25□□□□□ -1.73
NCK1-212ENST00000496489 MSRB2Q9Y3D2 182 aa4.25□□□□□ -1.73
NCK1-212ENST00000496489 PCDHB12Q9Y5F1 795 aa4.25□□□□□ -1.73
NCK1-212ENST00000496489 FAM221BA6H8Z2 402 aa4.24□□□□□ -1.73
NCK1-212ENST00000496489 KIAA1324LA8MWY0 1029 aaPredicted RBP4.24□□□□□ -1.73
NCK1-212ENST00000496489 IGF2BP3O00425 579 aaKnown RBP eCLIP4.24□□□□□ -1.73
NCK1-212ENST00000496489 PDPK1O15530 556 aa4.24□□□□□ -1.73
NCK1-212ENST00000496489 CYP26A1O43174 497 aa4.24□□□□□ -1.73
NCK1-212ENST00000496489 CBFA2T2O43439 604 aa4.24□□□□□ -1.73
NCK1-212ENST00000496489 SUSD5O60279 629 aa4.24□□□□□ -1.73
NCK1-212ENST00000496489 EPHX1P07099 455 aa4.24□□□□□ -1.73
NCK1-212ENST00000496489 NAT2P11245 290 aa4.24□□□□□ -1.73
NCK1-212ENST00000496489 TAL1P17542 331 aaPredicted RBP4.24□□□□□ -1.73
NCK1-212ENST00000496489 GP2P55259 537 aaKnown RBP4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms