RNA–Protein interactions for RNA: ENST00000496441.5

CDCA7-208, Transcript of cell division cycle associated 7, humanhuman

TSL 2

Gene CDCA7, Length 2,943 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA7-208ENST00000496441 SLC10A5Q5PT55 438 aa13.14□□□□□ -0.31
CDCA7-208ENST00000496441 RCSD1Q6JBY9 416 aa13.14□□□□□ -0.31
CDCA7-208ENST00000496441 ATP8A2Q9NTI2 1148 aa13.14□□□□□ -0.31
CDCA7-208ENST00000496441 RBM28Q9NW13 759 aaKnown RBP13.14□□□□□ -0.31
CDCA7-208ENST00000496441 DUOX1Q9NRD9 1551 aa13.13□□□□□ -0.31
CDCA7-208ENST00000496441 TEX33O43247 280 aa13.13□□□□□ -0.31
CDCA7-208ENST00000496441 CBFA2T2O43439 604 aa13.13□□□□□ -0.31
CDCA7-208ENST00000496441 CCT6AP40227 531 aaKnown RBP13.13□□□□□ -0.31
CDCA7-208ENST00000496441 ELF2Q15723 593 aa13.13□□□□□ -0.31
CDCA7-208ENST00000496441 NPY5RQ15761 445 aa13.13□□□□□ -0.31
CDCA7-208ENST00000496441 VSTM4Q8IW00 320 aa13.13□□□□□ -0.31
CDCA7-208ENST00000496441 PAGE5Q96GU1 130 aa13.13□□□□□ -0.31
CDCA7-208ENST00000496441 CCDC94Q9BW85 323 aaPredicted RBP13.13□□□□□ -0.31
CDCA7-208ENST00000496441 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.13□□□□□ -0.31
CDCA7-208ENST00000496441 CNTNAP4Q9C0A0 1308 aa13.13□□□□□ -0.31
CDCA7-208ENST00000496441 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.13□□□□□ -0.31
CDCA7-208ENST00000496441 FAM237AA0A1B0GTK4 181 aa13.13□□□□□ -0.31
CDCA7-208ENST00000496441 RIMBP2O15034 1052 aa13.13□□□□□ -0.31
CDCA7-208ENST00000496441 CTIFO43310 598 aaKnown RBP13.13□□□□□ -0.31
CDCA7-208ENST00000496441 UFL1O94874 794 aa13.13□□□□□ -0.31
CDCA7-208ENST00000496441 EIF6P56537 245 aaKnown RBP13.13□□□□□ -0.31
CDCA7-208ENST00000496441 MEX3CQ5U5Q3 659 aaKnown RBP13.13□□□□□ -0.31
CDCA7-208ENST00000496441 ZNF444Q8N0Y2 327 aaPredicted RBP13.13□□□□□ -0.31
CDCA7-208ENST00000496441 RPGRQ92834 1020 aaKnown RBP13.13□□□□□ -0.31
CDCA7-208ENST00000496441 ARPP21Q9UBL0 812 aaPredicted RBP13.13□□□□□ -0.31
CDCA7-208ENST00000496441 NRAPQ86VF7 1730 aa13.13□□□□□ -0.31
CDCA7-208ENST00000496441 TIAM2Q8IVF5 1701 aa13.13□□□□□ -0.31
CDCA7-208ENST00000496441 PES1O00541 588 aaKnown RBP13.12□□□□□ -0.31
CDCA7-208ENST00000496441 CALM1P0DP23 149 aa13.12□□□□□ -0.31
CDCA7-208ENST00000496441 CALM2P0DP24 149 aa13.12□□□□□ -0.31
CDCA7-208ENST00000496441 CALM3P0DP25 149 aa13.12□□□□□ -0.31
CDCA7-208ENST00000496441 MORC3Q14149 939 aa13.12□□□□□ -0.31
CDCA7-208ENST00000496441 DHX8Q14562 1220 aaKnown RBP13.12□□□□□ -0.31
CDCA7-208ENST00000496441 TYW1BQ6NUM6 668 aa13.12□□□□□ -0.31
CDCA7-208ENST00000496441 MTERF4Q7Z6M4 381 aaKnown RBP13.12□□□□□ -0.31
CDCA7-208ENST00000496441 ZBTB9Q96C00 473 aa13.12□□□□□ -0.31
CDCA7-208ENST00000496441 FAM205AQ6ZU69 1335 aa13.12□□□□□ -0.31
CDCA7-208ENST00000496441 PICALMQ13492 652 aa13.12□□□□□ -0.31
CDCA7-208ENST00000496441 KARSQ15046 597 aaKnown RBP13.12□□□□□ -0.31
CDCA7-208ENST00000496441 NOL10Q9BSC4 688 aaKnown RBP13.12□□□□□ -0.31
CDCA7-208ENST00000496441 CTNND2Q9UQB3 1225 aa13.12□□□□□ -0.31
CDCA7-208ENST00000496441 COL22A1Q8NFW1 1626 aaPredicted RBP13.12□□□□□ -0.31
CDCA7-208ENST00000496441 C6orf229H3BNL8 230 aa13.12□□□□□ -0.31
CDCA7-208ENST00000496441 DDAH1O94760 285 aa13.12□□□□□ -0.31
CDCA7-208ENST00000496441 MTF1Q14872 753 aa13.12□□□□□ -0.31
CDCA7-208ENST00000496441 VPS72Q15906 364 aa13.12□□□□□ -0.31
CDCA7-208ENST00000496441 IL17AQ16552 155 aa13.12□□□□□ -0.31
CDCA7-208ENST00000496441 INF2Q27J81 1249 aa13.12□□□□□ -0.31
CDCA7-208ENST00000496441 MLKLQ8NB16 471 aa13.12□□□□□ -0.31
CDCA7-208ENST00000496441 LRRC4BQ9NT99 713 aa13.12□□□□□ -0.31
CDCA7-208ENST00000496441 RAD21O60216 631 aa13.11□□□□□ -0.31
CDCA7-208ENST00000496441 GPSM2P81274 684 aa13.11□□□□□ -0.31
CDCA7-208ENST00000496441 CUL4BQ13620 913 aa13.11□□□□□ -0.31
CDCA7-208ENST00000496441 UIMC1Q96RL1 719 aa13.11□□□□□ -0.31
CDCA7-208ENST00000496441 SEMA3EO15041 775 aa13.11□□□□□ -0.31
CDCA7-208ENST00000496441 URI1O94763 535 aaPredicted RBP13.11□□□□□ -0.31
CDCA7-208ENST00000496441 SLFN14P0C7P3 912 aa13.11□□□□□ -0.31
CDCA7-208ENST00000496441 ERCC6LQ2NKX8 1250 aa13.11□□□□□ -0.31
CDCA7-208ENST00000496441 C12orf60Q5U649 245 aa13.11□□□□□ -0.31
CDCA7-208ENST00000496441 RRAGBQ5VZM2 374 aa13.11□□□□□ -0.31
CDCA7-208ENST00000496441 CLEC10AQ8IUN9 316 aa13.11□□□□□ -0.31
CDCA7-208ENST00000496441 BAG1Q99933 345 aaPredicted RBP13.11□□□□□ -0.31
CDCA7-208ENST00000496441 CASZ1Q86V15 1759 aa13.11□□□□□ -0.31
CDCA7-208ENST00000496441 NID2Q14112 1375 aa13.1□□□□□ -0.31
CDCA7-208ENST00000496441 ORC4O43929 436 aa13.1□□□□□ -0.31
CDCA7-208ENST00000496441 BTDP43251 543 aa13.1□□□□□ -0.31
CDCA7-208ENST00000496441 SARSP49591 514 aaKnown RBP13.1□□□□□ -0.31
CDCA7-208ENST00000496441 PPP2R5BQ15173 497 aa13.1□□□□□ -0.31
CDCA7-208ENST00000496441 PFKFB3Q16875 520 aaPredicted RBP13.1□□□□□ -0.31
CDCA7-208ENST00000496441 USP17L2Q6R6M4 530 aa13.1□□□□□ -0.31
CDCA7-208ENST00000496441 TOGARAM2Q6ZUX3 1019 aa13.1□□□□□ -0.31
CDCA7-208ENST00000496441 AMOTL1Q8IY63 956 aa13.1□□□□□ -0.31
CDCA7-208ENST00000496441 ZNF579Q8NAF0 562 aaKnown RBP13.1□□□□□ -0.31
CDCA7-208ENST00000496441 MTA3Q9BTC8 594 aa13.1□□□□□ -0.31
CDCA7-208ENST00000496441 SYNRGQ9UMZ2 1314 aa13.1□□□□□ -0.31
CDCA7-208ENST00000496441 CCDC194A0A1B0GVG4 234 aa13.1□□□□□ -0.31
CDCA7-208ENST00000496441 SLURP2P0DP57 97 aa13.1□□□□□ -0.31
CDCA7-208ENST00000496441 KIF5BP33176 963 aa13.1□□□□□ -0.31
CDCA7-208ENST00000496441 DPYDQ12882 1025 aa13.1□□□□□ -0.31
CDCA7-208ENST00000496441 GRAPQ13588 217 aa13.1□□□□□ -0.31
CDCA7-208ENST00000496441 SPTY2D1Q68D10 685 aaPredicted RBP13.1□□□□□ -0.31
CDCA7-208ENST00000496441 SPECC1LQ69YQ0 1117 aa13.1□□□□□ -0.31
CDCA7-208ENST00000496441 KANK3Q6NY19 840 aa13.1□□□□□ -0.31
CDCA7-208ENST00000496441 BLIDQ8IZY5 108 aa13.1□□□□□ -0.31
CDCA7-208ENST00000496441 GRAPLQ8TC17 118 aaPredicted RBP13.1□□□□□ -0.31
CDCA7-208ENST00000496441 ANKRD7Q92527 254 aa13.1□□□□□ -0.31
CDCA7-208ENST00000496441 IRX2Q9BZI1 471 aaPredicted RBP13.1□□□□□ -0.31
CDCA7-208ENST00000496441 ZMYND15Q9H091 742 aa13.1□□□□□ -0.31
CDCA7-208ENST00000496441 VPS16Q9H269 839 aa13.1□□□□□ -0.31
CDCA7-208ENST00000496441 DACH1Q9UI36 760 aa13.1□□□□□ -0.31
CDCA7-208ENST00000496441 LAMB2P55268 1798 aa13.1□□□□□ -0.31
CDCA7-208ENST00000496441 BAG3O95817 575 aa13.09□□□□□ -0.31
CDCA7-208ENST00000496441 RCAN1P53805 252 aa13.09□□□□□ -0.31
CDCA7-208ENST00000496441 PRR5LQ6MZQ0 368 aa13.09□□□□□ -0.31
CDCA7-208ENST00000496441 UBA5Q9GZZ9 404 aa13.09□□□□□ -0.31
CDCA7-208ENST00000496441 A0A1B0GUL6 1792 aa13.09□□□□□ -0.31
CDCA7-208ENST00000496441 COL5A3P25940 1745 aaPredicted RBP13.09□□□□□ -0.31
CDCA7-208ENST00000496441 A0A0U1RQJ8 604 aa13.09□□□□□ -0.31
CDCA7-208ENST00000496441 CYTH3O43739 400 aa13.09□□□□□ -0.31
CDCA7-208ENST00000496441 MFSD14BQ5SR56 506 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms