RNA–Protein interactions for RNA: ENST00000496335.1

PDAP1-204, Transcript of PDGFA associated protein 1, humanhuman

TSL 3

Gene PDAP1, Length 302 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-204ENST00000496335 HELLSQ9NRZ9 838 aa17.28■□□□□ 0.36
PDAP1-204ENST00000496335 RBBP6Q7Z6E9 1792 aaKnown RBP17.28■□□□□ 0.36
PDAP1-204ENST00000496335 ADCY3O60266 1144 aa17.27■□□□□ 0.36
PDAP1-204ENST00000496335 CNMDO75829 334 aa17.27■□□□□ 0.36
PDAP1-204ENST00000496335 ELNP15502 786 aa17.27■□□□□ 0.36
PDAP1-204ENST00000496335 ERVK-9P63128 1117 aa17.27■□□□□ 0.36
PDAP1-204ENST00000496335 ERVK-24P63145 666 aa17.27■□□□□ 0.36
PDAP1-204ENST00000496335 MTFR1Q15390 333 aa17.27■□□□□ 0.36
PDAP1-204ENST00000496335 TMEM106CQ9BVX2 250 aa17.27■□□□□ 0.36
PDAP1-204ENST00000496335 BIN2Q9UBW5 565 aaPredicted RBP17.27■□□□□ 0.36
PDAP1-204ENST00000496335 RLFQ13129 1914 aa17.27■□□□□ 0.35
PDAP1-204ENST00000496335 PLXNB2O15031 1838 aa17.26■□□□□ 0.35
PDAP1-204ENST00000496335 SPDYE16A6NNV3 312 aaPredicted RBP17.26■□□□□ 0.35
PDAP1-204ENST00000496335 EN2P19622 333 aaPredicted RBP17.26■□□□□ 0.35
PDAP1-204ENST00000496335 PDE4AP27815 886 aa17.26■□□□□ 0.35
PDAP1-204ENST00000496335 PPARAQ07869 468 aa17.26■□□□□ 0.35
PDAP1-204ENST00000496335 MCMDC2Q4G0Z9 681 aa17.26■□□□□ 0.35
PDAP1-204ENST00000496335 ZNF444Q8N0Y2 327 aaPredicted RBP17.26■□□□□ 0.35
PDAP1-204ENST00000496335 GTF3C2Q8WUA4 911 aaPredicted RBP17.26■□□□□ 0.35
PDAP1-204ENST00000496335 TANGO6Q9C0B7 1094 aa17.26■□□□□ 0.35
PDAP1-204ENST00000496335 PORCNQ9H237 461 aa17.26■□□□□ 0.35
PDAP1-204ENST00000496335 SH2D4AQ9H788 454 aa17.26■□□□□ 0.35
PDAP1-204ENST00000496335 VCPKMTQ9H867 229 aa17.26■□□□□ 0.35
PDAP1-204ENST00000496335 GJD2Q9UKL4 321 aa17.26■□□□□ 0.35
PDAP1-204ENST00000496335 RABGAP1Q9Y3P9 1069 aa17.26■□□□□ 0.35
PDAP1-204ENST00000496335 MYH4Q9Y623 1939 aa17.25■□□□□ 0.35
PDAP1-204ENST00000496335 SDSP20132 328 aa17.25■□□□□ 0.35
PDAP1-204ENST00000496335 CTDSPL2Q05D32 466 aa17.25■□□□□ 0.35
PDAP1-204ENST00000496335 ZNF589Q86UQ0 364 aaPredicted RBP17.25■□□□□ 0.35
PDAP1-204ENST00000496335 SLAIN1Q8ND83 568 aa17.25■□□□□ 0.35
PDAP1-204ENST00000496335 LPAR1Q92633 364 aa17.25■□□□□ 0.35
PDAP1-204ENST00000496335 INCENPQ9NQS7 918 aa17.25■□□□□ 0.35
PDAP1-204ENST00000496335 BTBD7Q9P203 1132 aa17.25■□□□□ 0.35
PDAP1-204ENST00000496335 RAD21O60216 631 aa17.24■□□□□ 0.35
PDAP1-204ENST00000496335 IRF5Q13568 498 aa17.24■□□□□ 0.35
PDAP1-204ENST00000496335 COG2Q14746 738 aa17.24■□□□□ 0.35
PDAP1-204ENST00000496335 LBX2Q6XYB7 198 aa17.24■□□□□ 0.35
PDAP1-204ENST00000496335 TICAM2Q86XR7 235 aa17.24■□□□□ 0.35
PDAP1-204ENST00000496335 ZNF287Q9HBT7 754 aa17.24■□□□□ 0.35
PDAP1-204ENST00000496335 PARP14Q460N5 1801 aa17.24■□□□□ 0.35
PDAP1-204ENST00000496335 MKI67P46013 3256 aaKnown RBP17.23■□□□□ 0.35
PDAP1-204ENST00000496335 IGKV6D-41A0A0C4DH26 115 aa17.23■□□□□ 0.35
PDAP1-204ENST00000496335 SLC3A2P08195 630 aaKnown RBP17.23■□□□□ 0.35
PDAP1-204ENST00000496335 MAPK4P31152 587 aa17.23■□□□□ 0.35
PDAP1-204ENST00000496335 PDE4BQ07343 736 aa17.23■□□□□ 0.35
PDAP1-204ENST00000496335 FAM47AQ5JRC9 791 aa17.23■□□□□ 0.35
PDAP1-204ENST00000496335 SAMD1Q6SPF0 538 aaPredicted RBP17.23■□□□□ 0.35
PDAP1-204ENST00000496335 CCAR1Q8IX12 1150 aaKnown RBP17.23■□□□□ 0.35
PDAP1-204ENST00000496335 PXYLP1Q8TE99 480 aa17.23■□□□□ 0.35
PDAP1-204ENST00000496335 GOPCQ9HD26 462 aa17.23■□□□□ 0.35
PDAP1-204ENST00000496335 HOXC10Q9NYD6 342 aa17.23■□□□□ 0.35
PDAP1-204ENST00000496335 NYAP2Q9P242 653 aa17.23■□□□□ 0.35
PDAP1-204ENST00000496335 CLIP2Q9UDT6 1046 aa17.23■□□□□ 0.35
PDAP1-204ENST00000496335 TACC3Q9Y6A5 838 aa17.23■□□□□ 0.35
PDAP1-204ENST00000496335 WDR46O15213 610 aaKnown RBP17.22■□□□□ 0.35
PDAP1-204ENST00000496335 FLOT1O75955 427 aa17.22■□□□□ 0.35
PDAP1-204ENST00000496335 FGAP02671 866 aa17.22■□□□□ 0.35
PDAP1-204ENST00000496335 INHAP05111 366 aa17.22■□□□□ 0.35
PDAP1-204ENST00000496335 HSPD1P10809 573 aaKnown RBP17.22■□□□□ 0.35
PDAP1-204ENST00000496335 CCL5P13501 91 aa17.22■□□□□ 0.35
PDAP1-204ENST00000496335 DSG3P32926 999 aa17.22■□□□□ 0.35
PDAP1-204ENST00000496335 UBXN2AP68543 259 aa17.22■□□□□ 0.35
PDAP1-204ENST00000496335 ALX1Q15699 326 aa17.22■□□□□ 0.35
PDAP1-204ENST00000496335 GPR142Q7Z601 462 aa17.22■□□□□ 0.35
PDAP1-204ENST00000496335 CEP95Q96GE4 821 aa17.22■□□□□ 0.35
PDAP1-204ENST00000496335 UNC93B1Q9H1C4 597 aa17.22■□□□□ 0.35
PDAP1-204ENST00000496335 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.22■□□□□ 0.35
PDAP1-204ENST00000496335 CCDC171Q6TFL3 1326 aa17.21■□□□□ 0.35
PDAP1-204ENST00000496335 TSPY3P0CV98 308 aa17.21■□□□□ 0.35
PDAP1-204ENST00000496335 TSPY8P0CW00 308 aa17.21■□□□□ 0.35
PDAP1-204ENST00000496335 CYP2B6P20813 491 aa17.21■□□□□ 0.35
PDAP1-204ENST00000496335 TFAP4Q01664 338 aa17.21■□□□□ 0.35
PDAP1-204ENST00000496335 FAM83BQ5T0W9 1011 aa17.21■□□□□ 0.35
PDAP1-204ENST00000496335 WDR78Q5VTH9 848 aa17.21■□□□□ 0.35
PDAP1-204ENST00000496335 CWC27Q6UX04 472 aaKnown RBP17.21■□□□□ 0.35
PDAP1-204ENST00000496335 PLEKHH3Q7Z736 793 aa17.21■□□□□ 0.35
PDAP1-204ENST00000496335 NEDD1Q8NHV4 660 aa17.21■□□□□ 0.35
PDAP1-204ENST00000496335 ATG4CQ96DT6 458 aa17.21■□□□□ 0.35
PDAP1-204ENST00000496335 NUP88Q99567 741 aaPredicted RBP17.21■□□□□ 0.35
PDAP1-204ENST00000496335 NUDT12Q9BQG2 462 aa17.21■□□□□ 0.35
PDAP1-204ENST00000496335 RNF208Q9H0X6 261 aa17.21■□□□□ 0.35
PDAP1-204ENST00000496335 DIAPH3Q9NSV4 1193 aa17.21■□□□□ 0.35
PDAP1-204ENST00000496335 FBXO28Q9NVF7 368 aa17.21■□□□□ 0.35
PDAP1-204ENST00000496335 MTMR4Q9NYA4 1195 aa17.21■□□□□ 0.35
PDAP1-204ENST00000496335 COL11A1P12107 1806 aaPredicted RBP17.21■□□□□ 0.35
PDAP1-204ENST00000496335 F5H6K3 240 aa17.2■□□□□ 0.34
PDAP1-204ENST00000496335 GSPT1P15170 499 aaKnown RBP17.2■□□□□ 0.34
PDAP1-204ENST00000496335 CCNA1P78396 465 aa17.2■□□□□ 0.34
PDAP1-204ENST00000496335 KLRC3Q07444 240 aa17.2■□□□□ 0.34
PDAP1-204ENST00000496335 CWC22Q9HCG8 908 aaKnown RBP17.2■□□□□ 0.34
PDAP1-204ENST00000496335 ANAPC4Q9UJX5 808 aa17.2■□□□□ 0.34
PDAP1-204ENST00000496335 A0A0G2JMZ2 1700 aa17.2■□□□□ 0.34
PDAP1-204ENST00000496335 PLIN4Q96Q06 1357 aa17.19■□□□□ 0.34
PDAP1-204ENST00000496335 NDUFB10O96000 172 aa17.19■□□□□ 0.34
PDAP1-204ENST00000496335 TRIM32Q13049 653 aa17.19■□□□□ 0.34
PDAP1-204ENST00000496335 MORN1Q5T089 497 aa17.19■□□□□ 0.34
PDAP1-204ENST00000496335 TTC22Q5TAA0 569 aa17.19■□□□□ 0.34
PDAP1-204ENST00000496335 USP6NLQ92738 828 aa17.19■□□□□ 0.34
PDAP1-204ENST00000496335 MOV10L1Q9BXT6 1211 aaKnown RBP17.19■□□□□ 0.34
PDAP1-204ENST00000496335 NMT2O60551 498 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms