RNA–Protein interactions for RNA: ENST00000496104.1

XPA-204, Transcript of XPA, DNA damage recognition and repair factor, humanhuman

TSL 3

Gene XPA, Length 429 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XPA-204ENST00000496104 JUNDP17535 347 aa6.16□□□□□ -1.42
XPA-204ENST00000496104 CAPN2P17655 700 aa6.16□□□□□ -1.42
XPA-204ENST00000496104 GTF2A2P52657 109 aa6.16□□□□□ -1.42
XPA-204ENST00000496104 PDE3AQ14432 1141 aa6.16□□□□□ -1.42
XPA-204ENST00000496104 RNFT1Q5M7Z0 435 aa6.16□□□□□ -1.42
XPA-204ENST00000496104 B4GALNT3Q6L9W6 998 aa6.16□□□□□ -1.42
XPA-204ENST00000496104 PHLDB3Q6NSJ2 640 aa6.16□□□□□ -1.42
XPA-204ENST00000496104 DHX37Q8IY37 1157 aaKnown RBP6.16□□□□□ -1.42
XPA-204ENST00000496104 HELBQ8NG08 1087 aaPredicted RBP6.16□□□□□ -1.42
XPA-204ENST00000496104 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.16□□□□□ -1.42
XPA-204ENST00000496104 SPATA32Q96LK8 384 aa6.16□□□□□ -1.42
XPA-204ENST00000496104 TEPSINQ96N21 525 aa6.16□□□□□ -1.42
XPA-204ENST00000496104 KLF16Q9BXK1 252 aaPredicted RBP6.16□□□□□ -1.42
XPA-204ENST00000496104 ZNF576Q9H609 170 aa6.16□□□□□ -1.42
XPA-204ENST00000496104 GNEQ9Y223 722 aaKnown RBP6.16□□□□□ -1.42
XPA-204ENST00000496104 DAGLAQ9Y4D2 1042 aa6.16□□□□□ -1.42
XPA-204ENST00000496104 AK9Q5TCS8 1911 aa6.16□□□□□ -1.42
XPA-204ENST00000496104 ANKRD11Q6UB99 2663 aaPredicted RBP6.16□□□□□ -1.42
XPA-204ENST00000496104 A0A0G2JMZ2 1700 aa6.16□□□□□ -1.42
XPA-204ENST00000496104 PLXNA1Q9UIW2 1896 aa6.15□□□□□ -1.42
XPA-204ENST00000496104 RLFQ13129 1914 aa6.15□□□□□ -1.42
XPA-204ENST00000496104 RIF1Q5UIP0 2472 aaKnown RBP6.15□□□□□ -1.42
XPA-204ENST00000496104 COL4A6Q14031 1691 aa6.15□□□□□ -1.42
XPA-204ENST00000496104 USP17L3A6NCW0 530 aa6.15□□□□□ -1.42
XPA-204ENST00000496104 USP17L4A6NCW7 530 aa6.15□□□□□ -1.42
XPA-204ENST00000496104 PPP1R12BO60237 982 aaPredicted RBP6.15□□□□□ -1.42
XPA-204ENST00000496104 HMOX1P09601 288 aa6.15□□□□□ -1.42
XPA-204ENST00000496104 U2AF1L5P0DN76 240 aaPredicted RBP6.15□□□□□ -1.42
XPA-204ENST00000496104 SLURP2P0DP57 97 aa6.15□□□□□ -1.42
XPA-204ENST00000496104 ITGB8P26012 769 aa6.15□□□□□ -1.42
XPA-204ENST00000496104 U2AF1Q01081 240 aaKnown RBP eCLIP6.15□□□□□ -1.42
XPA-204ENST00000496104 ELOAQ14241 798 aaKnown RBP6.15□□□□□ -1.42
XPA-204ENST00000496104 DESI1Q6ICB0 168 aa6.15□□□□□ -1.42
XPA-204ENST00000496104 USP17L1Q7RTZ2 530 aa6.15□□□□□ -1.42
XPA-204ENST00000496104 SREK1Q8WXA9 508 aaKnown RBP6.15□□□□□ -1.42
XPA-204ENST00000496104 NUDT12Q9BQG2 462 aa6.15□□□□□ -1.42
XPA-204ENST00000496104 PRRC2BQ5JSZ5 2229 aaKnown RBP6.15□□□□□ -1.43
XPA-204ENST00000496104 FAM186AA6NE01 2351 aa6.14□□□□□ -1.43
XPA-204ENST00000496104 ATP9BO43861 1147 aa6.14□□□□□ -1.43
XPA-204ENST00000496104 ITGB2P05107 769 aa6.14□□□□□ -1.43
XPA-204ENST00000496104 SNRPA1P09661 255 aaKnown RBP6.14□□□□□ -1.43
XPA-204ENST00000496104 IREB2P48200 963 aaKnown RBP6.14□□□□□ -1.43
XPA-204ENST00000496104 MAP3K21Q5TCX8 1036 aa6.14□□□□□ -1.43
XPA-204ENST00000496104 LYPD8Q6UX82 237 aa6.14□□□□□ -1.43
XPA-204ENST00000496104 DDX46Q7L014 1031 aaKnown RBP6.14□□□□□ -1.43
XPA-204ENST00000496104 ERMP1Q7Z2K6 904 aa6.14□□□□□ -1.43
XPA-204ENST00000496104 TMC4Q7Z404 712 aa6.14□□□□□ -1.43
XPA-204ENST00000496104 NGEFQ8N5V2 710 aa6.14□□□□□ -1.43
XPA-204ENST00000496104 SIN3AQ96ST3 1273 aa6.14□□□□□ -1.43
XPA-204ENST00000496104 TMX4Q9H1E5 349 aaPredicted RBP6.14□□□□□ -1.43
XPA-204ENST00000496104 MAST4O15021 2626 aa6.14□□□□□ -1.43
XPA-204ENST00000496104 ASPMQ8IZT6 3477 aa6.14□□□□□ -1.43
XPA-204ENST00000496104 CLRN2A0PK11 232 aa6.13□□□□□ -1.43
XPA-204ENST00000496104 UFL1O94874 794 aa6.13□□□□□ -1.43
XPA-204ENST00000496104 PROCP04070 461 aa6.13□□□□□ -1.43
XPA-204ENST00000496104 HOXD10P28358 340 aa6.13□□□□□ -1.43
XPA-204ENST00000496104 FCGRTP55899 365 aa6.13□□□□□ -1.43
XPA-204ENST00000496104 TCF15Q12870 199 aa6.13□□□□□ -1.43
XPA-204ENST00000496104 LCE3BQ5TA77 95 aa6.13□□□□□ -1.43
XPA-204ENST00000496104 CERS5Q8N5B7 392 aa6.13□□□□□ -1.43
XPA-204ENST00000496104 BADQ92934 168 aa6.13□□□□□ -1.43
XPA-204ENST00000496104 EYA3Q99504 573 aa6.13□□□□□ -1.43
XPA-204ENST00000496104 KCNH6Q9H252 994 aa6.13□□□□□ -1.43
XPA-204ENST00000496104 CWC22Q9HCG8 908 aaKnown RBP6.13□□□□□ -1.43
XPA-204ENST00000496104 DNMT3LQ9UJW3 386 aa6.13□□□□□ -1.43
XPA-204ENST00000496104 ZMIZ1Q9ULJ6 1067 aa6.13□□□□□ -1.43
XPA-204ENST00000496104 PPP2R3BQ9Y5P8 575 aa6.13□□□□□ -1.43
XPA-204ENST00000496104 GBF1Q92538 1859 aa6.13□□□□□ -1.43
XPA-204ENST00000496104 ZNF292O60281 2723 aa6.12□□□□□ -1.43
XPA-204ENST00000496104 TRIM43BA6NCK2 446 aa6.12□□□□□ -1.43
XPA-204ENST00000496104 GRXCR1A8MXD5 290 aa6.12□□□□□ -1.43
XPA-204ENST00000496104 K7ELQ4 463 aaPredicted RBP6.12□□□□□ -1.43
XPA-204ENST00000496104 PIK3CDO00329 1044 aa6.12□□□□□ -1.43
XPA-204ENST00000496104 ERC2O15083 957 aa6.12□□□□□ -1.43
XPA-204ENST00000496104 TECTAO75443 2155 aa6.12□□□□□ -1.43
XPA-204ENST00000496104 CYP2C8P10632 490 aa6.12□□□□□ -1.43
XPA-204ENST00000496104 CETPP11597 493 aa6.12□□□□□ -1.43
XPA-204ENST00000496104 BMP2P12643 396 aa6.12□□□□□ -1.43
XPA-204ENST00000496104 NR1H3Q13133 447 aa6.12□□□□□ -1.43
XPA-204ENST00000496104 SEMA3FQ13275 785 aa6.12□□□□□ -1.43
XPA-204ENST00000496104 SH3RF1Q7Z6J0 888 aa6.12□□□□□ -1.43
XPA-204ENST00000496104 ANKRD23Q86SG2 305 aa6.12□□□□□ -1.43
XPA-204ENST00000496104 TXNRD3Q86VQ6 643 aa6.12□□□□□ -1.43
XPA-204ENST00000496104 RETREG3Q86VR2 466 aa6.12□□□□□ -1.43
XPA-204ENST00000496104 NLRP10Q86W26 655 aa6.12□□□□□ -1.43
XPA-204ENST00000496104 KIAA0825Q8IV33 1275 aa6.12□□□□□ -1.43
XPA-204ENST00000496104 KMT2EQ8IZD2 1858 aa6.12□□□□□ -1.43
XPA-204ENST00000496104 NANOS1Q8WY41 292 aaKnown RBP6.12□□□□□ -1.43
XPA-204ENST00000496104 TRIM43Q96BQ3 446 aaPredicted RBP6.12□□□□□ -1.43
XPA-204ENST00000496104 TIFAQ96CG3 184 aa6.12□□□□□ -1.43
XPA-204ENST00000496104 MRRFQ96E11 262 aaKnown RBP6.12□□□□□ -1.43
XPA-204ENST00000496104 UTP14AQ9BVJ6 771 aaKnown RBP6.12□□□□□ -1.43
XPA-204ENST00000496104 ZC3H12CQ9C0D7 883 aaKnown RBP6.12□□□□□ -1.43
XPA-204ENST00000496104 ZFAND3Q9H8U3 227 aa6.12□□□□□ -1.43
XPA-204ENST00000496104 BCCIPQ9P287 314 aaKnown RBP eCLIP6.12□□□□□ -1.43
XPA-204ENST00000496104 SPEGQ15772 3267 aa6.11□□□□□ -1.43
XPA-204ENST00000496104 WDR87Q6ZQQ6 2873 aa6.11□□□□□ -1.43
XPA-204ENST00000496104 BTBD11A6QL63 1104 aa6.11□□□□□ -1.43
XPA-204ENST00000496104 PDHXO00330 501 aa6.11□□□□□ -1.43
XPA-204ENST00000496104 SMARCA5O60264 1052 aaPredicted RBP6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms