RNA–Protein interactions for RNA: ENST00000495400.1

PTPN18-216, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 4

Gene PTPN18, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-216ENST00000495400 COL6A1P12109 1028 aa17.81■□□□□ 0.44
PTPN18-216ENST00000495400 SYN1P17600 705 aa17.81■□□□□ 0.44
PTPN18-216ENST00000495400 ATP5JP18859 108 aa17.81■□□□□ 0.44
PTPN18-216ENST00000495400 ATP2B2Q01814 1243 aa17.81■□□□□ 0.44
PTPN18-216ENST00000495400 GRB14Q14449 540 aa17.81■□□□□ 0.44
PTPN18-216ENST00000495400 ATP8A2Q9NTI2 1148 aa17.81■□□□□ 0.44
PTPN18-216ENST00000495400 SOX1O00570 391 aaPredicted RBP17.8■□□□□ 0.44
PTPN18-216ENST00000495400 PRKAB2O43741 272 aa17.8■□□□□ 0.44
PTPN18-216ENST00000495400 MBD4O95243 580 aa17.8■□□□□ 0.44
PTPN18-216ENST00000495400 SLC44A5Q8NCS7 719 aa17.8■□□□□ 0.44
PTPN18-216ENST00000495400 NPLOC4Q8TAT6 608 aa17.8■□□□□ 0.44
PTPN18-216ENST00000495400 DYNLL2Q96FJ2 89 aa17.8■□□□□ 0.44
PTPN18-216ENST00000495400 HAUS7Q99871 368 aa17.8■□□□□ 0.44
PTPN18-216ENST00000495400 TANGO6Q9C0B7 1094 aa17.8■□□□□ 0.44
PTPN18-216ENST00000495400 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.8■□□□□ 0.448e-7■■■■■ 37.5
PTPN18-216ENST00000495400 SZT2Q5T011 3432 aa17.8■□□□□ 0.44
PTPN18-216ENST00000495400 STRNO43815 780 aa17.79■□□□□ 0.44
PTPN18-216ENST00000495400 SLFNL1Q499Z3 407 aa17.79■□□□□ 0.44
PTPN18-216ENST00000495400 MOV10L1Q9BXT6 1211 aaKnown RBP17.79■□□□□ 0.44
PTPN18-216ENST00000495400 ARHGEF10LQ9HCE6 1279 aa17.79■□□□□ 0.44
PTPN18-216ENST00000495400 ZNF236Q9UL36 1845 aa17.78■□□□□ 0.44
PTPN18-216ENST00000495400 MSCO60682 206 aa17.78■□□□□ 0.44
PTPN18-216ENST00000495400 AKR1B1P15121 316 aa17.78■□□□□ 0.44
PTPN18-216ENST00000495400 CNGA1P29973 690 aa17.78■□□□□ 0.44
PTPN18-216ENST00000495400 DSG3P32926 999 aa17.78■□□□□ 0.44
PTPN18-216ENST00000495400 MAGEA10P43363 369 aaPredicted RBP17.78■□□□□ 0.44
PTPN18-216ENST00000495400 UBE3CQ15386 1083 aa17.78■□□□□ 0.44
PTPN18-216ENST00000495400 KIAA1755Q5JYT7 1200 aa17.78■□□□□ 0.44
PTPN18-216ENST00000495400 AMOTL1Q8IY63 956 aa17.78■□□□□ 0.44
PTPN18-216ENST00000495400 MB21D1Q8N884 522 aa17.78■□□□□ 0.44
PTPN18-216ENST00000495400 SHCBP1Q8NEM2 672 aa17.78■□□□□ 0.44
PTPN18-216ENST00000495400 LPAR1Q92633 364 aa17.78■□□□□ 0.44
PTPN18-216ENST00000495400 LRCH3Q96II8 777 aa17.78■□□□□ 0.44
PTPN18-216ENST00000495400 CCDC17Q96LX7 622 aa17.78■□□□□ 0.44
PTPN18-216ENST00000495400 SPATC1LQ9H0A9 340 aa17.78■□□□□ 0.44
PTPN18-216ENST00000495400 DDX20Q9UHI6 824 aaKnown RBP17.78■□□□□ 0.44
PTPN18-216ENST00000495400 RCAN3Q9UKA8 241 aa17.78■□□□□ 0.44
PTPN18-216ENST00000495400 TMX2Q9Y320 296 aa17.78■□□□□ 0.44
PTPN18-216ENST00000495400 A0A0G2JMZ2 1700 aa17.78■□□□□ 0.44
PTPN18-216ENST00000495400 ZNFX1Q9P2E3 1918 aaKnown RBP17.77■□□□□ 0.44
PTPN18-216ENST00000495400 CYP2C19P33261 490 aa17.77■□□□□ 0.44
PTPN18-216ENST00000495400 CDK8P49336 464 aa17.77■□□□□ 0.44
PTPN18-216ENST00000495400 ICA1Q05084 483 aa17.77■□□□□ 0.44
PTPN18-216ENST00000495400 LRRC26Q2I0M4 334 aa17.77■□□□□ 0.44
PTPN18-216ENST00000495400 C12orf60Q5U649 245 aa17.77■□□□□ 0.44
PTPN18-216ENST00000495400 DPP9Q86TI2 863 aa17.77■□□□□ 0.44
PTPN18-216ENST00000495400 SIAH1Q8IUQ4 282 aa17.77■□□□□ 0.44
PTPN18-216ENST00000495400 SH2D4AQ9H788 454 aa17.77■□□□□ 0.44
PTPN18-216ENST00000495400 PARP14Q460N5 1801 aa17.77■□□□□ 0.43
PTPN18-216ENST00000495400 USP17L12C9JPN9 530 aa17.76■□□□□ 0.43
PTPN18-216ENST00000495400 USP17L21D6R901 530 aa17.76■□□□□ 0.43
PTPN18-216ENST00000495400 IGHA2P01877 340 aa17.76■□□□□ 0.43
PTPN18-216ENST00000495400 ERCC3P19447 782 aa17.76■□□□□ 0.43
PTPN18-216ENST00000495400 ADORA2AP29274 412 aa17.76■□□□□ 0.43
PTPN18-216ENST00000495400 OLFML2BQ68BL8 750 aa17.76■□□□□ 0.43
PTPN18-216ENST00000495400 ZSCAN25Q6NSZ9 544 aa17.76■□□□□ 0.43
PTPN18-216ENST00000495400 DDRGK1Q96HY6 314 aa17.76■□□□□ 0.43
PTPN18-216ENST00000495400 LRRCC1Q9C099 1032 aa17.76■□□□□ 0.43
PTPN18-216ENST00000495400 VCPKMTQ9H867 229 aa17.76■□□□□ 0.43
PTPN18-216ENST00000495400 CYP2D7A0A087X1C5 515 aa17.75■□□□□ 0.43
PTPN18-216ENST00000495400 FLOT1O75955 427 aa17.75■□□□□ 0.43
PTPN18-216ENST00000495400 CHGBP05060 677 aa17.75■□□□□ 0.43
PTPN18-216ENST00000495400 PLS1Q14651 629 aa17.75■□□□□ 0.43
PTPN18-216ENST00000495400 C16orf86Q6ZW13 317 aa17.75■□□□□ 0.43
PTPN18-216ENST00000495400 CLEC10AQ8IUN9 316 aa17.75■□□□□ 0.43
PTPN18-216ENST00000495400 SPICE1Q8N0Z3 855 aa17.75■□□□□ 0.43
PTPN18-216ENST00000495400 TRPV1Q8NER1 839 aa17.75■□□□□ 0.43
PTPN18-216ENST00000495400 UBE2OQ9C0C9 1292 aaKnown RBP17.75■□□□□ 0.43
PTPN18-216ENST00000495400 SENP6Q9GZR1 1112 aaPredicted RBP17.75■□□□□ 0.43
PTPN18-216ENST00000495400 MROH8Q9H579 483 aa17.75■□□□□ 0.43
PTPN18-216ENST00000495400 SLC5A4Q9NY91 659 aa17.75■□□□□ 0.43
PTPN18-216ENST00000495400 SLC4A4Q9Y6R1 1079 aa17.75■□□□□ 0.43
PTPN18-216ENST00000495400 SMIM22K7EJ46 135 aa17.74■□□□□ 0.43
PTPN18-216ENST00000495400 WDR46O15213 610 aaKnown RBP17.74■□□□□ 0.43
PTPN18-216ENST00000495400 CYBAP13498 195 aa17.74■□□□□ 0.43
PTPN18-216ENST00000495400 LRIT3Q3SXY7 679 aa17.74■□□□□ 0.43
PTPN18-216ENST00000495400 GPR153Q6NV75 609 aa17.74■□□□□ 0.43
PTPN18-216ENST00000495400 TDHQ8IZJ6 230 aa17.74■□□□□ 0.43
PTPN18-216ENST00000495400 ATG4CQ96DT6 458 aa17.74■□□□□ 0.43
PTPN18-216ENST00000495400 PUS7LQ9H0K6 701 aaKnown RBP17.74■□□□□ 0.43
PTPN18-216ENST00000495400 COL11A1P12107 1806 aaPredicted RBP17.74■□□□□ 0.43
PTPN18-216ENST00000495400 SMARCA5O60264 1052 aaPredicted RBP17.73■□□□□ 0.43
PTPN18-216ENST00000495400 COBLO75128 1261 aa17.73■□□□□ 0.43
PTPN18-216ENST00000495400 CTR9Q6PD62 1173 aa17.73■□□□□ 0.43
PTPN18-216ENST00000495400 NCAPG2Q86XI2 1143 aa17.73■□□□□ 0.43
PTPN18-216ENST00000495400 ABRAQ8N0Z2 381 aa17.73■□□□□ 0.43
PTPN18-216ENST00000495400 KANSL2Q9H9L4 492 aa17.73■□□□□ 0.43
PTPN18-216ENST00000495400 DNM1LO00429 736 aa17.72■□□□□ 0.43
PTPN18-216ENST00000495400 EEF2P13639 858 aaKnown RBP17.72■□□□□ 0.43
PTPN18-216ENST00000495400 C20orf194Q5TEA3 1177 aa17.72■□□□□ 0.43
PTPN18-216ENST00000495400 SAMD1Q6SPF0 538 aaPredicted RBP17.72■□□□□ 0.43
PTPN18-216ENST00000495400 SLC25A27O95847 323 aa17.71■□□□□ 0.43
PTPN18-216ENST00000495400 TMEM132BQ14DG7 1078 aa17.71■□□□□ 0.43
PTPN18-216ENST00000495400 ARRDC4Q8NCT1 418 aa17.71■□□□□ 0.43
PTPN18-216ENST00000495400 ECHDC1Q9NTX5 307 aa17.71■□□□□ 0.43
PTPN18-216ENST00000495400 ARPP21Q9UBL0 812 aaPredicted RBP17.71■□□□□ 0.43
PTPN18-216ENST00000495400 ADAMTS5Q9UNA0 930 aa17.71■□□□□ 0.43
PTPN18-216ENST00000495400 SEPT4O43236 478 aa17.7■□□□□ 0.42
PTPN18-216ENST00000495400 FCER1AP12319 257 aa17.7■□□□□ 0.42
PTPN18-216ENST00000495400 ATN1P54259 1190 aaPredicted RBP17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms