RNA–Protein interactions for RNA: ENST00000494862.1

HDLBP-245, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 356 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-245ENST00000494862 TMOD2Q9NZR1 351 aa13.29□□□□□ -0.28
HDLBP-245ENST00000494862 STX8Q9UNK0 236 aa13.29□□□□□ -0.28
HDLBP-245ENST00000494862 BCS1LQ9Y276 419 aa13.29□□□□□ -0.28
HDLBP-245ENST00000494862 V9GY48 417 aaPredicted RBP13.29□□□□□ -0.28
HDLBP-245ENST00000494862 UTRNP46939 3433 aa13.29□□□□□ -0.28
HDLBP-245ENST00000494862 PALM3A6NDB9 673 aaPredicted RBP13.28□□□□□ -0.28
HDLBP-245ENST00000494862 GOLGA6L4A6NEF3 574 aa13.28□□□□□ -0.28
HDLBP-245ENST00000494862 GOLGA6L3A6NEY3 463 aa13.28□□□□□ -0.28
HDLBP-245ENST00000494862 GNL2Q13823 731 aaKnown RBP13.28□□□□□ -0.28
HDLBP-245ENST00000494862 TNIP1Q15025 636 aa13.28□□□□□ -0.28
HDLBP-245ENST00000494862 CCDC183Q5T5S1 534 aa13.28□□□□□ -0.28
HDLBP-245ENST00000494862 L1TD1Q5T7N2 865 aaKnown RBP13.28□□□□□ -0.28
HDLBP-245ENST00000494862 METTL16Q86W50 562 aaKnown RBP13.28□□□□□ -0.28
HDLBP-245ENST00000494862 IFNLR1Q8IU57 520 aaPredicted RBP13.28□□□□□ -0.28
HDLBP-245ENST00000494862 FOXP1Q9H334 677 aaPredicted RBP13.28□□□□□ -0.28
HDLBP-245ENST00000494862 MTMR4Q9NYA4 1195 aa13.28□□□□□ -0.28
HDLBP-245ENST00000494862 MAD2L2Q9UI95 211 aa13.28□□□□□ -0.28
HDLBP-245ENST00000494862 TCHHQ07283 1943 aa13.28□□□□□ -0.28
HDLBP-245ENST00000494862 ATRNL1Q5VV63 1379 aa13.28□□□□□ -0.28
HDLBP-245ENST00000494862 BRCA1P38398 1863 aaKnown RBP13.27□□□□□ -0.28
HDLBP-245ENST00000494862 DDTLA6NHG4 134 aaPredicted RBP13.27□□□□□ -0.29
HDLBP-245ENST00000494862 YEATS4O95619 227 aa13.27□□□□□ -0.29
HDLBP-245ENST00000494862 NASPP49321 788 aaPredicted RBP13.27□□□□□ -0.29
HDLBP-245ENST00000494862 FKBP1CQ5VVH2 108 aa13.27□□□□□ -0.29
HDLBP-245ENST00000494862 ZSCAN29Q8IWY8 852 aaPredicted RBP13.27□□□□□ -0.29
HDLBP-245ENST00000494862 DIS3L2Q8IYB7 885 aaKnown RBP13.27□□□□□ -0.29
HDLBP-245ENST00000494862 PGBD1Q96JS3 809 aa13.27□□□□□ -0.29
HDLBP-245ENST00000494862 TRIM34Q9BYJ4 488 aa13.27□□□□□ -0.29
HDLBP-245ENST00000494862 POLR3EQ9NVU0 708 aa13.27□□□□□ -0.29
HDLBP-245ENST00000494862 ZNF70Q9UC06 446 aaPredicted RBP13.27□□□□□ -0.29
HDLBP-245ENST00000494862 KCNJ14Q9UNX9 436 aa13.27□□□□□ -0.29
HDLBP-245ENST00000494862 ECM29Q5VYK3 1845 aa13.27□□□□□ -0.29
HDLBP-245ENST00000494862 LETM1O95202 739 aaPredicted RBP13.26□□□□□ -0.29
HDLBP-245ENST00000494862 PARP1P09874 1014 aaKnown RBP13.26□□□□□ -0.29
HDLBP-245ENST00000494862 SCG2P13521 617 aa13.26□□□□□ -0.29
HDLBP-245ENST00000494862 RPS12P25398 132 aaKnown RBP13.26□□□□□ -0.29
HDLBP-245ENST00000494862 SMARCA1P28370 1054 aa13.26□□□□□ -0.29
HDLBP-245ENST00000494862 CEBPZQ03701 1054 aaKnown RBP13.26□□□□□ -0.29
HDLBP-245ENST00000494862 STK38Q15208 465 aa13.26□□□□□ -0.29
HDLBP-245ENST00000494862 PFKFB3Q16875 520 aaPredicted RBP13.26□□□□□ -0.29
HDLBP-245ENST00000494862 FER1L6Q2WGJ9 1857 aa13.26□□□□□ -0.29
HDLBP-245ENST00000494862 ANO1Q5XXA6 986 aa13.26□□□□□ -0.29
HDLBP-245ENST00000494862 STAG2Q8N3U4 1231 aa13.26□□□□□ -0.29
HDLBP-245ENST00000494862 LINC00301Q8NCQ3 95 aa13.26□□□□□ -0.29
HDLBP-245ENST00000494862 KCNG4Q8TDN1 519 aa13.26□□□□□ -0.29
HDLBP-245ENST00000494862 FAM151AQ8WW52 585 aa13.26□□□□□ -0.29
HDLBP-245ENST00000494862 ZBED3Q96IU2 234 aaPredicted RBP13.26□□□□□ -0.29
HDLBP-245ENST00000494862 FTOQ9C0B1 505 aaKnown RBP eCLIP13.26□□□□□ -0.29
HDLBP-245ENST00000494862 DNAJC18Q9H819 358 aa13.26□□□□□ -0.29
HDLBP-245ENST00000494862 hCG_1642624A0A1W2PR95 340 aa13.25□□□□□ -0.29
HDLBP-245ENST00000494862 BTBD18B2RXH4 712 aa13.25□□□□□ -0.29
HDLBP-245ENST00000494862 TTLL1O95922 423 aa13.25□□□□□ -0.29
HDLBP-245ENST00000494862 KRT2P35908 639 aa13.25□□□□□ -0.29
HDLBP-245ENST00000494862 CERKLQ49MI3 558 aaPredicted RBP13.25□□□□□ -0.29
HDLBP-245ENST00000494862 TATDN1Q6P1N9 297 aa13.25□□□□□ -0.29
HDLBP-245ENST00000494862 NOSTRINQ8IVI9 506 aa13.25□□□□□ -0.29
HDLBP-245ENST00000494862 PHF20Q9BVI0 1012 aa13.25□□□□□ -0.29
HDLBP-245ENST00000494862 SPZ1Q9BXG8 430 aa13.25□□□□□ -0.29
HDLBP-245ENST00000494862 SPON1Q9HCB6 807 aa13.25□□□□□ -0.29
HDLBP-245ENST00000494862 BRMS1Q9HCU9 246 aa13.25□□□□□ -0.29
HDLBP-245ENST00000494862 VPS54Q9P1Q0 977 aa13.25□□□□□ -0.29
HDLBP-245ENST00000494862 CLIC4Q9Y696 253 aa13.25□□□□□ -0.29
HDLBP-245ENST00000494862 CLRN2A0PK11 232 aa13.24□□□□□ -0.29
HDLBP-245ENST00000494862 KLRF2D3W0D1 207 aa13.24□□□□□ -0.29
HDLBP-245ENST00000494862 MPHOSPH10O00566 681 aaKnown RBP13.24□□□□□ -0.29
HDLBP-245ENST00000494862 SNHG28P0DPA3 235 aa13.24□□□□□ -0.29
HDLBP-245ENST00000494862 LIG1P18858 919 aa13.24□□□□□ -0.29
HDLBP-245ENST00000494862 EIF6P56537 245 aaKnown RBP13.24□□□□□ -0.29
HDLBP-245ENST00000494862 ZNF280AP59817 542 aaPredicted RBP13.24□□□□□ -0.29
HDLBP-245ENST00000494862 SF3A1Q15459 793 aaKnown RBP13.24□□□□□ -0.29
HDLBP-245ENST00000494862 TPRNQ4KMQ1 711 aa13.24□□□□□ -0.29
HDLBP-245ENST00000494862 ASPRV1Q53RT3 343 aa13.24□□□□□ -0.29
HDLBP-245ENST00000494862 LRSAM1Q6UWE0 723 aa13.24□□□□□ -0.29
HDLBP-245ENST00000494862 GAS2L3Q86XJ1 694 aa13.24□□□□□ -0.29
HDLBP-245ENST00000494862 FAM177A1Q8N128 213 aaPredicted RBP13.24□□□□□ -0.29
HDLBP-245ENST00000494862 NLGN2Q8NFZ4 835 aa13.24□□□□□ -0.29
HDLBP-245ENST00000494862 BICD2Q8TD16 824 aa13.24□□□□□ -0.29
HDLBP-245ENST00000494862 SHISA4Q96DD7 197 aa13.24□□□□□ -0.29
HDLBP-245ENST00000494862 SH3GLB2Q9NR46 395 aa13.24□□□□□ -0.29
HDLBP-245ENST00000494862 DDX19AQ9NUU7 478 aaKnown RBP13.24□□□□□ -0.29
HDLBP-245ENST00000494862 CLIP2Q9UDT6 1046 aa13.24□□□□□ -0.29
HDLBP-245ENST00000494862 A0A1W2PQ27 194 aa13.23□□□□□ -0.29
HDLBP-245ENST00000494862 A0A1W2PQ64 194 aa13.23□□□□□ -0.29
HDLBP-245ENST00000494862 A0A1W2PQD8 194 aa13.23□□□□□ -0.29
HDLBP-245ENST00000494862 SYCE3A1L190 88 aa13.23□□□□□ -0.29
HDLBP-245ENST00000494862 TCP10L2B9ZVM9 353 aa13.23□□□□□ -0.29
HDLBP-245ENST00000494862 FZD9O00144 591 aa13.23□□□□□ -0.29
HDLBP-245ENST00000494862 SPTLC2O15270 562 aa13.23□□□□□ -0.29
HDLBP-245ENST00000494862 MYO1BO43795 1136 aa13.23□□□□□ -0.29
HDLBP-245ENST00000494862 PDHBP11177 359 aa13.23□□□□□ -0.29
HDLBP-245ENST00000494862 MRE11P49959 708 aa13.23□□□□□ -0.29
HDLBP-245ENST00000494862 RASSF7Q02833 373 aa13.23□□□□□ -0.29
HDLBP-245ENST00000494862 SLC39A14Q15043 492 aa13.23□□□□□ -0.29
HDLBP-245ENST00000494862 SLC35G1Q2M3R5 365 aa13.23□□□□□ -0.29
HDLBP-245ENST00000494862 RILPL1Q5EBL4 403 aa13.23□□□□□ -0.29
HDLBP-245ENST00000494862 USP17L2Q6R6M4 530 aa13.23□□□□□ -0.29
HDLBP-245ENST00000494862 TMEM179Q6ZVK1 233 aa13.23□□□□□ -0.29
HDLBP-245ENST00000494862 FAM83AQ86UY5 434 aa13.23□□□□□ -0.29
HDLBP-245ENST00000494862 LRRC47Q8N1G4 583 aaKnown RBP13.23□□□□□ -0.29
HDLBP-245ENST00000494862 MKL1Q969V6 931 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms