RNA–Protein interactions for RNA: ENST00000494815.1

TSPAN4-212, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 2,187 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-212ENST00000494815 TTC12Q9H892 705 aaPredicted RBP21.33■■□□□ 1
TSPAN4-212ENST00000494815 TAOK2Q9UL54 1235 aa21.33■■□□□ 1
TSPAN4-212ENST00000494815 MYH6P13533 1939 aa21.32■■□□□ 1
TSPAN4-212ENST00000494815 PSME4Q14997 1843 aa21.32■■□□□ 1
TSPAN4-212ENST00000494815 ME1P48163 572 aa21.32■■□□□ 1
TSPAN4-212ENST00000494815 STK38Q15208 465 aa21.32■■□□□ 1
TSPAN4-212ENST00000494815 CLIC4Q9Y696 253 aa21.32■■□□□ 1
TSPAN4-212ENST00000494815 RBM5P52756 815 aaKnown RBP eCLIP21.31■■□□□ 1
TSPAN4-212ENST00000494815 NFIAQ12857 509 aa21.31■■□□□ 1
TSPAN4-212ENST00000494815 LARGE2Q8N3Y3 721 aa21.31■■□□□ 1
TSPAN4-212ENST00000494815 DHX36Q9H2U1 1008 aaKnown RBP21.31■■□□□ 1
TSPAN4-212ENST00000494815 DACT1Q9NYF0 836 aa21.31■■□□□ 1
TSPAN4-212ENST00000494815 NUP62CLQ9H1M0 184 aa21.31■■□□□ 1
TSPAN4-212ENST00000494815 KCNJ14Q9UNX9 436 aa21.31■■□□□ 1
TSPAN4-212ENST00000494815 SPTLC2O15270 562 aa21.3■■□□□ 1
TSPAN4-212ENST00000494815 SF3A1Q15459 793 aaKnown RBP21.3■■□□□ 1
TSPAN4-212ENST00000494815 ADALQ6DHV7 355 aa21.3■■□□□ 1
TSPAN4-212ENST00000494815 A0A1W2PQ27 194 aa21.3■■□□□ 1
TSPAN4-212ENST00000494815 A0A1W2PQ64 194 aa21.3■■□□□ 1
TSPAN4-212ENST00000494815 A0A1W2PQD8 194 aa21.3■■□□□ 1
TSPAN4-212ENST00000494815 BTBD18B2RXH4 712 aa21.3■■□□□ 1
TSPAN4-212ENST00000494815 TOP1P11387 765 aaKnown RBP21.3■■□□□ 1
TSPAN4-212ENST00000494815 CEP95Q96GE4 821 aa21.3■■□□□ 1
TSPAN4-212ENST00000494815 PHF20Q9BVI0 1012 aa21.3■■□□□ 1
TSPAN4-212ENST00000494815 ATF5Q9Y2D1 282 aaPredicted RBP21.3■■□□□ 1
TSPAN4-212ENST00000494815 SLC39A14Q15043 492 aa21.29■■□□□ 1
TSPAN4-212ENST00000494815 RSBN1LQ6PCB5 846 aaPredicted RBP21.29■■□□□ 1
TSPAN4-212ENST00000494815 LZTS2Q9BRK4 669 aa21.29■■□□□ 1
TSPAN4-212ENST00000494815 ZNF277Q9NRM2 450 aaPredicted RBP21.29■■□□□ 1
TSPAN4-212ENST00000494815 MAD2L2Q9UI95 211 aa21.29■■□□□ 1
TSPAN4-212ENST00000494815 PCDHA7Q9UN72 937 aa21.29■■□□□ 1
TSPAN4-212ENST00000494815 VPS54Q9P1Q0 977 aa21.29■■□□□ 1
TSPAN4-212ENST00000494815 NR1I2O75469 434 aa21.28■■□□□ 1
TSPAN4-212ENST00000494815 VIL1P09327 827 aaKnown RBP21.28■■□□□ 1
TSPAN4-212ENST00000494815 SCG2P13521 617 aa21.28■■□□□ 1
TSPAN4-212ENST00000494815 PFKFB3Q16875 520 aaPredicted RBP21.28■■□□□ 1
TSPAN4-212ENST00000494815 DALRD3Q5D0E6 543 aaKnown RBP21.28■■□□□ 1
TSPAN4-212ENST00000494815 CCDC73Q6ZRK6 1079 aa21.28■■□□□ 1
TSPAN4-212ENST00000494815 CCAR1Q8IX12 1150 aaKnown RBP21.28■■□□□ 1
TSPAN4-212ENST00000494815 CLSTN2Q9H4D0 955 aa21.28■■□□□ 1
TSPAN4-212ENST00000494815 PCDHAC2Q9Y5I4 1007 aa21.28■■□□□ 1
TSPAN4-212ENST00000494815 PALM3A6NDB9 673 aaPredicted RBP21.27■■□□□ 1
TSPAN4-212ENST00000494815 RILPL1Q5EBL4 403 aa21.27■■□□□ 1
TSPAN4-212ENST00000494815 ZNF710Q8N1W2 664 aa21.27■■□□□ 1
TSPAN4-212ENST00000494815 JMYQ8N9B5 988 aa21.27■■□□□ 1
TSPAN4-212ENST00000494815 ARID3AQ99856 593 aa21.27■■□□□ 1
TSPAN4-212ENST00000494815 MTMR4Q9NYA4 1195 aa21.27■■□□□ 1
TSPAN4-212ENST00000494815 FAM198AQ9UFP1 575 aa21.27■■□□□ 1
TSPAN4-212ENST00000494815 IGKV6D-41A0A0C4DH26 115 aa21.27■■□□□ 1
TSPAN4-212ENST00000494815 PPP6R2O75170 966 aa21.27■■□□□ 1
TSPAN4-212ENST00000494815 TPM3P06753 285 aa21.27■■□□□ 1
TSPAN4-212ENST00000494815 SHMT1P34896 483 aa21.27■■□□□ 1
TSPAN4-212ENST00000494815 MAP3K11Q16584 847 aa21.27■■□□□ 1
TSPAN4-212ENST00000494815 CFAP100Q494V2 611 aa21.27■■□□□ 1
TSPAN4-212ENST00000494815 C17orf53Q8N3J3 647 aaPredicted RBP21.27■■□□□ 1
TSPAN4-212ENST00000494815 SHISA4Q96DD7 197 aa21.27■■□□□ 1
TSPAN4-212ENST00000494815 BRMS1Q9HCU9 246 aa21.27■■□□□ 1
TSPAN4-212ENST00000494815 hCG_1642624A0A1W2PR95 340 aa21.26■□□□□ 0.99
TSPAN4-212ENST00000494815 KRT2P35908 639 aa21.26■□□□□ 0.99
TSPAN4-212ENST00000494815 FAM160A1Q05DH4 1040 aa21.26■□□□□ 0.99
TSPAN4-212ENST00000494815 RBM43Q6ZSC3 357 aaKnown RBP21.26■□□□□ 0.99
TSPAN4-212ENST00000494815 STAG2Q8N3U4 1231 aa21.26■□□□□ 0.99
TSPAN4-212ENST00000494815 MRPS27Q92552 414 aaKnown RBP21.26■□□□□ 0.99
TSPAN4-212ENST00000494815 CCDC17Q96LX7 622 aa21.26■□□□□ 0.99
TSPAN4-212ENST00000494815 GMLQ99445 158 aa21.26■□□□□ 0.99
TSPAN4-212ENST00000494815 TNMDQ9H2S6 317 aa21.26■□□□□ 0.99
TSPAN4-212ENST00000494815 PI4KBQ9UBF8 816 aa21.26■□□□□ 0.99
TSPAN4-212ENST00000494815 ZNRF3Q9ULT6 936 aa21.26■□□□□ 0.99
TSPAN4-212ENST00000494815 COL4A5P29400 1685 aa21.26■□□□□ 0.99
TSPAN4-212ENST00000494815 GOLGB1Q14789 3259 aaKnown RBP21.26■□□□□ 0.99
TSPAN4-212ENST00000494815 ENTPD3O75355 529 aa21.26■□□□□ 0.99
TSPAN4-212ENST00000494815 AKR1B1P15121 316 aa21.26■□□□□ 0.99
TSPAN4-212ENST00000494815 PTPAQ15257 358 aa21.26■□□□□ 0.99
TSPAN4-212ENST00000494815 PPP4R3BQ5MIZ7 849 aa21.26■□□□□ 0.99
TSPAN4-212ENST00000494815 NIM1KQ8IY84 436 aa21.26■□□□□ 0.99
TSPAN4-212ENST00000494815 EIF4ENIF1Q9NRA8 985 aaKnown RBP21.26■□□□□ 0.99
TSPAN4-212ENST00000494815 MYH8P13535 1937 aa21.25■□□□□ 0.99
TSPAN4-212ENST00000494815 COL2A1P02458 1487 aaPredicted RBP21.25■□□□□ 0.99
TSPAN4-212ENST00000494815 PSMD14O00487 310 aa21.25■□□□□ 0.99
TSPAN4-212ENST00000494815 CACNB3P54284 484 aa21.25■□□□□ 0.99
TSPAN4-212ENST00000494815 NR5A1Q13285 461 aa21.25■□□□□ 0.99
TSPAN4-212ENST00000494815 ZFPM1Q8IX07 1006 aa21.25■□□□□ 0.99
TSPAN4-212ENST00000494815 FSIP1Q8NA03 581 aa21.25■□□□□ 0.99
TSPAN4-212ENST00000494815 SH3GLB2Q9NR46 395 aa21.25■□□□□ 0.99
TSPAN4-212ENST00000494815 HDAC9Q9UKV0 1011 aa21.25■□□□□ 0.99
TSPAN4-212ENST00000494815 RAD17O75943 681 aa21.24■□□□□ 0.99
TSPAN4-212ENST00000494815 PARP1P09874 1014 aaKnown RBP21.24■□□□□ 0.99
TSPAN4-212ENST00000494815 SMARCA1P28370 1054 aa21.24■□□□□ 0.99
TSPAN4-212ENST00000494815 R3HDM1Q15032 1099 aaKnown RBP21.24■□□□□ 0.99
TSPAN4-212ENST00000494815 FAM177A1Q8N128 213 aaPredicted RBP21.24■□□□□ 0.99
TSPAN4-212ENST00000494815 ENGASEQ8NFI3 743 aa21.24■□□□□ 0.99
TSPAN4-212ENST00000494815 OXER1Q8TDS5 423 aa21.24■□□□□ 0.99
TSPAN4-212ENST00000494815 GOLPH3LQ9H4A5 285 aa21.24■□□□□ 0.99
TSPAN4-212ENST00000494815 ATRNL1Q5VV63 1379 aa21.24■□□□□ 0.99
TSPAN4-212ENST00000494815 TCP10Q12799 353 aa21.24■□□□□ 0.99
TSPAN4-212ENST00000494815 KIAA1524Q8TCG1 905 aa21.24■□□□□ 0.99
TSPAN4-212ENST00000494815 SPZ1Q9BXG8 430 aa21.24■□□□□ 0.99
TSPAN4-212ENST00000494815 CD2APQ9Y5K6 639 aa21.24■□□□□ 0.99
TSPAN4-212ENST00000494815 AP5Z1O43299 807 aa21.23■□□□□ 0.99
TSPAN4-212ENST00000494815 TTLL1O95922 423 aa21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms