RNA–Protein interactions for RNA: ENST00000494800.1

HDAC4-211, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 451 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-211ENST00000494800 A0A0D9SFI3 127 aa20.98■□□□□ 0.95
HDAC4-211ENST00000494800 MAPK4P31152 587 aa20.98■□□□□ 0.95
HDAC4-211ENST00000494800 FLT3LGP49771 235 aa20.98■□□□□ 0.95
HDAC4-211ENST00000494800 UBXN2AP68543 259 aa20.98■□□□□ 0.95
HDAC4-211ENST00000494800 COG2Q14746 738 aa20.98■□□□□ 0.95
HDAC4-211ENST00000494800 CLEC10AQ8IUN9 316 aa20.98■□□□□ 0.95
HDAC4-211ENST00000494800 RBPJLQ9UBG7 517 aa20.98■□□□□ 0.95
HDAC4-211ENST00000494800 ZSWIM8A7E2V4 1837 aa20.98■□□□□ 0.95
HDAC4-211ENST00000494800 WDR46O15213 610 aaKnown RBP20.97■□□□□ 0.95
HDAC4-211ENST00000494800 RAD21O60216 631 aa20.97■□□□□ 0.95
HDAC4-211ENST00000494800 PRDM1O75626 825 aa20.97■□□□□ 0.95
HDAC4-211ENST00000494800 TSPY3P0CV98 308 aa20.97■□□□□ 0.95
HDAC4-211ENST00000494800 TSPY8P0CW00 308 aa20.97■□□□□ 0.95
HDAC4-211ENST00000494800 IRF5Q13568 498 aa20.97■□□□□ 0.95
HDAC4-211ENST00000494800 ALX1Q15699 326 aa20.97■□□□□ 0.95
HDAC4-211ENST00000494800 PPP4R3BQ5MIZ7 849 aa20.97■□□□□ 0.95
HDAC4-211ENST00000494800 LBX2Q6XYB7 198 aa20.97■□□□□ 0.95
HDAC4-211ENST00000494800 SIAH1Q8IUQ4 282 aa20.97■□□□□ 0.95
HDAC4-211ENST00000494800 TXNRD2Q9NNW7 524 aa20.97■□□□□ 0.95
HDAC4-211ENST00000494800 GABRQQ9UN88 632 aa20.97■□□□□ 0.95
HDAC4-211ENST00000494800 CCDC171Q6TFL3 1326 aa20.97■□□□□ 0.95
HDAC4-211ENST00000494800 ADCY3O60266 1144 aa20.96■□□□□ 0.95
HDAC4-211ENST00000494800 VPS53Q5VIR6 699 aa20.96■□□□□ 0.95
HDAC4-211ENST00000494800 SPICE1Q8N0Z3 855 aa20.96■□□□□ 0.95
HDAC4-211ENST00000494800 PXYLP1Q8TE99 480 aa20.96■□□□□ 0.95
HDAC4-211ENST00000494800 NYAP2Q9P242 653 aa20.96■□□□□ 0.95
HDAC4-211ENST00000494800 HTTP42858 3142 aa20.95■□□□□ 0.95
HDAC4-211ENST00000494800 SPDYE16A6NNV3 312 aaPredicted RBP20.95■□□□□ 0.94
HDAC4-211ENST00000494800 FLOT1O75955 427 aa20.95■□□□□ 0.94
HDAC4-211ENST00000494800 MB21D1Q8N884 522 aa20.95■□□□□ 0.94
HDAC4-211ENST00000494800 SOCS4Q8WXH5 440 aa20.95■□□□□ 0.94
HDAC4-211ENST00000494800 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.95■□□□□ 0.94
HDAC4-211ENST00000494800 MGAMO43451 1857 aa20.94■□□□□ 0.94
HDAC4-211ENST00000494800 MYCP01106 439 aaPredicted RBP20.94■□□□□ 0.94
HDAC4-211ENST00000494800 HSPD1P10809 573 aaKnown RBP20.94■□□□□ 0.94
HDAC4-211ENST00000494800 CWC27Q6UX04 472 aaKnown RBP20.94■□□□□ 0.94
HDAC4-211ENST00000494800 ANAPC4Q9UJX5 808 aa20.94■□□□□ 0.94
HDAC4-211ENST00000494800 SYNPO2Q9UMS6 1093 aa20.94■□□□□ 0.94
HDAC4-211ENST00000494800 ZMYM6O95789 1325 aa20.94■□□□□ 0.94
HDAC4-211ENST00000494800 TSPY2A6NKD2 308 aa20.93■□□□□ 0.94
HDAC4-211ENST00000494800 FOXP2O15409 715 aa20.93■□□□□ 0.94
HDAC4-211ENST00000494800 TTLL1O95922 423 aa20.93■□□□□ 0.94
HDAC4-211ENST00000494800 FGAP02671 866 aa20.93■□□□□ 0.94
HDAC4-211ENST00000494800 PDE4AP27815 886 aa20.93■□□□□ 0.94
HDAC4-211ENST00000494800 TFAP4Q01664 338 aa20.93■□□□□ 0.94
HDAC4-211ENST00000494800 Q3C1V9 767 aa20.93■□□□□ 0.94
HDAC4-211ENST00000494800 TTC22Q5TAA0 569 aa20.93■□□□□ 0.94
HDAC4-211ENST00000494800 ZNF589Q86UQ0 364 aaPredicted RBP20.93■□□□□ 0.94
HDAC4-211ENST00000494800 NEDD1Q8NHV4 660 aa20.93■□□□□ 0.94
HDAC4-211ENST00000494800 NUDT12Q9BQG2 462 aa20.93■□□□□ 0.94
HDAC4-211ENST00000494800 CLIP2Q9UDT6 1046 aa20.93■□□□□ 0.94
HDAC4-211ENST00000494800 CTDSPL2Q05D32 466 aa20.92■□□□□ 0.94
HDAC4-211ENST00000494800 KIAA1755Q5JYT7 1200 aa20.92■□□□□ 0.94
HDAC4-211ENST00000494800 WDR78Q5VTH9 848 aa20.92■□□□□ 0.94
HDAC4-211ENST00000494800 PLEKHH3Q7Z736 793 aa20.92■□□□□ 0.94
HDAC4-211ENST00000494800 CEP95Q96GE4 821 aa20.92■□□□□ 0.94
HDAC4-211ENST00000494800 TOMM22Q9NS69 142 aa20.92■□□□□ 0.94
HDAC4-211ENST00000494800 MTMR4Q9NYA4 1195 aa20.92■□□□□ 0.94
HDAC4-211ENST00000494800 IVNS1ABPQ9Y6Y0 642 aa20.92■□□□□ 0.94
HDAC4-211ENST00000494800 PLIN4Q96Q06 1357 aa20.92■□□□□ 0.94
HDAC4-211ENST00000494800 IGKV6D-41A0A0C4DH26 115 aa20.91■□□□□ 0.94
HDAC4-211ENST00000494800 PEX10O60683 326 aa20.91■□□□□ 0.94
HDAC4-211ENST00000494800 DSG3P32926 999 aa20.91■□□□□ 0.94
HDAC4-211ENST00000494800 FAM47AQ5JRC9 791 aa20.91■□□□□ 0.94
HDAC4-211ENST00000494800 SAMD1Q6SPF0 538 aaPredicted RBP20.91■□□□□ 0.94
HDAC4-211ENST00000494800 GPR142Q7Z601 462 aa20.91■□□□□ 0.94
HDAC4-211ENST00000494800 NKX2-3Q8TAU0 364 aa20.91■□□□□ 0.94
HDAC4-211ENST00000494800 PORCNQ9H237 461 aa20.91■□□□□ 0.94
HDAC4-211ENST00000494800 POTEFA5A3E0 1075 aa20.9■□□□□ 0.94
HDAC4-211ENST00000494800 F5H6K3 240 aa20.9■□□□□ 0.94
HDAC4-211ENST00000494800 RANBP6O60518 1105 aaKnown RBP20.9■□□□□ 0.94
HDAC4-211ENST00000494800 CNMDO75829 334 aa20.9■□□□□ 0.94
HDAC4-211ENST00000494800 PCP11498 1178 aaKnown RBP20.9■□□□□ 0.94
HDAC4-211ENST00000494800 ELNP15502 786 aa20.9■□□□□ 0.94
HDAC4-211ENST00000494800 KLRC3Q07444 240 aa20.9■□□□□ 0.94
HDAC4-211ENST00000494800 TRMT44Q8IYL2 757 aaKnown RBP20.9■□□□□ 0.94
HDAC4-211ENST00000494800 MKL1Q969V6 931 aa20.9■□□□□ 0.94
HDAC4-211ENST00000494800 BTBD7Q9P203 1132 aa20.9■□□□□ 0.94
HDAC4-211ENST00000494800 GJD2Q9UKL4 321 aa20.9■□□□□ 0.94
HDAC4-211ENST00000494800 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.9■□□□□ 0.94
HDAC4-211ENST00000494800 ORC4O43929 436 aa20.89■□□□□ 0.93
HDAC4-211ENST00000494800 INHAP05111 366 aa20.89■□□□□ 0.93
HDAC4-211ENST00000494800 CCL5P13501 91 aa20.89■□□□□ 0.93
HDAC4-211ENST00000494800 RGS2P41220 211 aa20.89■□□□□ 0.93
HDAC4-211ENST00000494800 PLS1Q14651 629 aa20.89■□□□□ 0.93
HDAC4-211ENST00000494800 FAM83BQ5T0W9 1011 aa20.89■□□□□ 0.93
HDAC4-211ENST00000494800 POTEEQ6S8J3 1075 aa20.89■□□□□ 0.93
HDAC4-211ENST00000494800 RUFY2Q8WXA3 655 aa20.89■□□□□ 0.93
HDAC4-211ENST00000494800 SPATC1LQ9H0A9 340 aa20.89■□□□□ 0.93
HDAC4-211ENST00000494800 RNF208Q9H0X6 261 aa20.89■□□□□ 0.93
HDAC4-211ENST00000494800 RNF41Q9H4P4 317 aaPredicted RBP20.89■□□□□ 0.93
HDAC4-211ENST00000494800 GREB1LQ9C091 1923 aaPredicted RBP20.88■□□□□ 0.93
HDAC4-211ENST00000494800 ZNF213O14771 459 aa20.88■□□□□ 0.93
HDAC4-211ENST00000494800 NDUFB10O96000 172 aa20.88■□□□□ 0.93
HDAC4-211ENST00000494800 HMGCRP04035 888 aa20.88■□□□□ 0.93
HDAC4-211ENST00000494800 XRCC5P13010 732 aaKnown RBP20.88■□□□□ 0.93
HDAC4-211ENST00000494800 GSPT1P15170 499 aaKnown RBP20.88■□□□□ 0.93
HDAC4-211ENST00000494800 CYP2B6P20813 491 aa20.88■□□□□ 0.93
HDAC4-211ENST00000494800 MTFR1Q15390 333 aa20.88■□□□□ 0.93
HDAC4-211ENST00000494800 CENPQQ7L2Z9 268 aaPredicted RBP20.88■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms