RNA–Protein interactions for RNA: ENST00000494610.1

CSNK1E-212, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-212ENST00000494610 RPAP3Q9H6T3 665 aaPredicted RBP14.24□□□□□ -0.13
CSNK1E-212ENST00000494610 RLFQ13129 1914 aa14.23□□□□□ -0.13
CSNK1E-212ENST00000494610 A0A1W2PRG0 241 aa14.23□□□□□ -0.13
CSNK1E-212ENST00000494610 GRB14Q14449 540 aa14.23□□□□□ -0.13
CSNK1E-212ENST00000494610 SEPT2Q15019 361 aa14.23□□□□□ -0.13
CSNK1E-212ENST00000494610 ABCB5Q2M3G0 1257 aa14.23□□□□□ -0.13
CSNK1E-212ENST00000494610 CERKLQ49MI3 558 aaPredicted RBP14.23□□□□□ -0.13
CSNK1E-212ENST00000494610 SH3RF1Q7Z6J0 888 aa14.23□□□□□ -0.13
CSNK1E-212ENST00000494610 CLEC10AQ8IUN9 316 aa14.23□□□□□ -0.13
CSNK1E-212ENST00000494610 PCDHB15Q9Y5E8 787 aa14.23□□□□□ -0.13
CSNK1E-212ENST00000494610 SLC15A5A6NIM6 579 aa14.22□□□□□ -0.13
CSNK1E-212ENST00000494610 SMIM22K7EJ46 135 aa14.22□□□□□ -0.13
CSNK1E-212ENST00000494610 COBLO75128 1261 aa14.22□□□□□ -0.13
CSNK1E-212ENST00000494610 IGHA2P01877 340 aa14.22□□□□□ -0.13
CSNK1E-212ENST00000494610 CYBAP13498 195 aa14.22□□□□□ -0.13
CSNK1E-212ENST00000494610 ATP8B2P98198 1209 aa14.22□□□□□ -0.13
CSNK1E-212ENST00000494610 SSH3Q8TE77 659 aa14.22□□□□□ -0.13
CSNK1E-212ENST00000494610 LPAR1Q92633 364 aa14.22□□□□□ -0.13
CSNK1E-212ENST00000494610 BADQ92934 168 aa14.22□□□□□ -0.13
CSNK1E-212ENST00000494610 FERMT2Q96AC1 680 aa14.22□□□□□ -0.13
CSNK1E-212ENST00000494610 CDX2Q99626 313 aaPredicted RBP14.22□□□□□ -0.13
CSNK1E-212ENST00000494610 LBHD1Q9BQE6 289 aaPredicted RBP14.22□□□□□ -0.13
CSNK1E-212ENST00000494610 MOV10L1Q9BXT6 1211 aaKnown RBP14.22□□□□□ -0.13
CSNK1E-212ENST00000494610 GPR108Q9NPR9 543 aa14.22□□□□□ -0.13
CSNK1E-212ENST00000494610 PRDM5Q9NQX1 630 aaPredicted RBP14.22□□□□□ -0.13
CSNK1E-212ENST00000494610 SERPINB13Q9UIV8 391 aa14.22□□□□□ -0.13
CSNK1E-212ENST00000494610 CYP2D6P10635 497 aa14.21□□□□□ -0.13
CSNK1E-212ENST00000494610 ADORA2AP29274 412 aa14.21□□□□□ -0.13
CSNK1E-212ENST00000494610 TRIM60Q495X7 471 aa14.21□□□□□ -0.13
CSNK1E-212ENST00000494610 SLFNL1Q499Z3 407 aa14.21□□□□□ -0.13
CSNK1E-212ENST00000494610 HSP90AB4PQ58FF6 505 aa14.21□□□□□ -0.13
CSNK1E-212ENST00000494610 SLC44A5Q8NCS7 719 aa14.21□□□□□ -0.13
CSNK1E-212ENST00000494610 KIAA1683Q9H0B3 1180 aa14.21□□□□□ -0.13
CSNK1E-212ENST00000494610 GINM1Q9NU53 330 aa14.21□□□□□ -0.13
CSNK1E-212ENST00000494610 ZBTB47Q9UFB7 747 aaPredicted RBP14.21□□□□□ -0.13
CSNK1E-212ENST00000494610 TTC28Q96AY4 2481 aa14.21□□□□□ -0.13
CSNK1E-212ENST00000494610 CHD9Q3L8U1 2897 aa14.2□□□□□ -0.14
CSNK1E-212ENST00000494610 SMCHD1A6NHR9 2005 aa14.2□□□□□ -0.14
CSNK1E-212ENST00000494610 TRIM43BA6NCK2 446 aa14.2□□□□□ -0.14
CSNK1E-212ENST00000494610 DNM1LO00429 736 aa14.2□□□□□ -0.14
CSNK1E-212ENST00000494610 HOXC6P09630 235 aa14.2□□□□□ -0.14
CSNK1E-212ENST00000494610 ITGB8P26012 769 aa14.2□□□□□ -0.14
CSNK1E-212ENST00000494610 CCNA1P78396 465 aa14.2□□□□□ -0.14
CSNK1E-212ENST00000494610 SAMD1Q6SPF0 538 aaPredicted RBP14.2□□□□□ -0.14
CSNK1E-212ENST00000494610 SLC39A5Q6ZMH5 540 aa14.2□□□□□ -0.14
CSNK1E-212ENST00000494610 GTF3C2Q8WUA4 911 aaPredicted RBP14.2□□□□□ -0.14
CSNK1E-212ENST00000494610 MYLIPQ8WY64 445 aa14.2□□□□□ -0.14
CSNK1E-212ENST00000494610 TRIM43Q96BQ3 446 aaPredicted RBP14.2□□□□□ -0.14
CSNK1E-212ENST00000494610 ZNF512BQ96KM6 892 aaPredicted RBP14.2□□□□□ -0.14
CSNK1E-212ENST00000494610 BCL11AQ9H165 835 aa14.2□□□□□ -0.14
CSNK1E-212ENST00000494610 TTYH1Q9H313 450 aaPredicted RBP14.2□□□□□ -0.14
CSNK1E-212ENST00000494610 SEMA6BQ9H3T3 888 aa14.2□□□□□ -0.14
CSNK1E-212ENST00000494610 IVNS1ABPQ9Y6Y0 642 aa14.2□□□□□ -0.14
CSNK1E-212ENST00000494610 REV3LO60673 3130 aa14.19□□□□□ -0.14
CSNK1E-212ENST00000494610 MPHOSPH10O00566 681 aaKnown RBP14.19□□□□□ -0.14
CSNK1E-212ENST00000494610 GLRX3O76003 335 aaKnown RBP14.19□□□□□ -0.14
CSNK1E-212ENST00000494610 ERCC3P19447 782 aa14.19□□□□□ -0.14
CSNK1E-212ENST00000494610 ADCYAP1R1P41586 468 aa14.19□□□□□ -0.14
CSNK1E-212ENST00000494610 EPHB4P54760 987 aa14.19□□□□□ -0.14
CSNK1E-212ENST00000494610 ZNF697Q5TEC3 545 aa14.19□□□□□ -0.14
CSNK1E-212ENST00000494610 FAM109BQ6ICB4 259 aaPredicted RBP14.19□□□□□ -0.14
CSNK1E-212ENST00000494610 LBX2Q6XYB7 198 aa14.19□□□□□ -0.14
CSNK1E-212ENST00000494610 DPP9Q86TI2 863 aa14.19□□□□□ -0.14
CSNK1E-212ENST00000494610 RIOK1Q9BRS2 568 aaKnown RBP14.19□□□□□ -0.14
CSNK1E-212ENST00000494610 EHD4Q9H223 541 aa14.19□□□□□ -0.14
CSNK1E-212ENST00000494610 NAV1Q8NEY1 1877 aa14.18□□□□□ -0.14
CSNK1E-212ENST00000494610 USP14P54578 494 aa14.18□□□□□ -0.14
CSNK1E-212ENST00000494610 PLS1Q14651 629 aa14.18□□□□□ -0.14
CSNK1E-212ENST00000494610 FAM47AQ5JRC9 791 aa14.18□□□□□ -0.14
CSNK1E-212ENST00000494610 SIAH1Q8IUQ4 282 aa14.18□□□□□ -0.14
CSNK1E-212ENST00000494610 SPICE1Q8N0Z3 855 aa14.18□□□□□ -0.14
CSNK1E-212ENST00000494610 SDR42E1Q8WUS8 393 aa14.18□□□□□ -0.14
CSNK1E-212ENST00000494610 LENG1Q96BZ8 264 aaPredicted RBP14.18□□□□□ -0.14
CSNK1E-212ENST00000494610 DYNLL2Q96FJ2 89 aa14.18□□□□□ -0.14
CSNK1E-212ENST00000494610 TANGO6Q9C0B7 1094 aa14.18□□□□□ -0.14
CSNK1E-212ENST00000494610 PDLIM7Q9NR12 457 aa14.18□□□□□ -0.14
CSNK1E-212ENST00000494610 PRKAG2Q9UGJ0 569 aa14.18□□□□□ -0.14
CSNK1E-212ENST00000494610 EXOC6BQ9Y2D4 811 aa14.18□□□□□ -0.14
CSNK1E-212ENST00000494610 ZNFX1Q9P2E3 1918 aaKnown RBP14.17□□□□□ -0.14
CSNK1E-212ENST00000494610 CHGBP05060 677 aa14.17□□□□□ -0.14
CSNK1E-212ENST00000494610 POLR3DP05423 398 aaPredicted RBP14.17□□□□□ -0.14
CSNK1E-212ENST00000494610 TAL1P17542 331 aaPredicted RBP14.17□□□□□ -0.14
CSNK1E-212ENST00000494610 GABPAQ06546 454 aa14.17□□□□□ -0.14
CSNK1E-212ENST00000494610 TTC6Q86TZ1 520 aa14.17□□□□□ -0.14
CSNK1E-212ENST00000494610 SMC5Q8IY18 1101 aa14.17□□□□□ -0.14
CSNK1E-212ENST00000494610 MAFAQ8NHW3 353 aaPredicted RBP14.17□□□□□ -0.14
CSNK1E-212ENST00000494610 ATG4CQ96DT6 458 aa14.17□□□□□ -0.14
CSNK1E-212ENST00000494610 SPATC1LQ9H0A9 340 aa14.17□□□□□ -0.14
CSNK1E-212ENST00000494610 IL1RAPL2Q9NP60 686 aa14.17□□□□□ -0.14
CSNK1E-212ENST00000494610 CABP5Q9NP86 173 aa14.17□□□□□ -0.14
CSNK1E-212ENST00000494610 NOP58Q9Y2X3 529 aaKnown RBP14.17□□□□□ -0.14
CSNK1E-212ENST00000494610 A0A0G2JMZ2 1700 aa14.16□□□□□ -0.14
CSNK1E-212ENST00000494610 CYP2D7A0A087X1C5 515 aa14.16□□□□□ -0.14
CSNK1E-212ENST00000494610 MAGEB6P1A0A0J9YX57 407 aa14.16□□□□□ -0.14
CSNK1E-212ENST00000494610 PRKAB2O43741 272 aa14.16□□□□□ -0.14
CSNK1E-212ENST00000494610 COG2Q14746 738 aa14.16□□□□□ -0.14
CSNK1E-212ENST00000494610 LRRC41Q15345 812 aa14.16□□□□□ -0.14
CSNK1E-212ENST00000494610 AACSQ86V21 672 aa14.16□□□□□ -0.14
CSNK1E-212ENST00000494610 NCAPG2Q86XI2 1143 aa14.16□□□□□ -0.14
CSNK1E-212ENST00000494610 ERC1Q8IUD2 1116 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms