RNA–Protein interactions for RNA: ENST00000493991.5

COL2A1-208, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 2

Gene COL2A1, Length 3,756 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-208ENST00000493991 CHMP2AO43633 222 aa12.45□□□□□ -0.42
COL2A1-208ENST00000493991 SCG2P13521 617 aa12.45□□□□□ -0.42
COL2A1-208ENST00000493991 CALML3P27482 149 aa12.45□□□□□ -0.42
COL2A1-208ENST00000493991 TMEM266Q2M3C6 531 aa12.45□□□□□ -0.42
COL2A1-208ENST00000493991 C6orf50Q9HD87 102 aa12.45□□□□□ -0.42
COL2A1-208ENST00000493991 HPS5Q9UPZ3 1129 aa12.45□□□□□ -0.42
COL2A1-208ENST00000493991 CDHR2Q9BYE9 1310 aa12.45□□□□□ -0.42
COL2A1-208ENST00000493991 MYO1BO43795 1136 aa12.45□□□□□ -0.42
COL2A1-208ENST00000493991 ZSCAN20P17040 1043 aaPredicted RBP12.45□□□□□ -0.42
COL2A1-208ENST00000493991 GNAQP50148 359 aa12.45□□□□□ -0.42
COL2A1-208ENST00000493991 UBXN1Q04323 297 aa12.45□□□□□ -0.42
COL2A1-208ENST00000493991 TSGA10IPQ3SY00 556 aa12.45□□□□□ -0.42
COL2A1-208ENST00000493991 ATL3Q6DD88 541 aa12.45□□□□□ -0.42
COL2A1-208ENST00000493991 KCTD1Q719H9 257 aa12.45□□□□□ -0.42
COL2A1-208ENST00000493991 CACNA2D4Q7Z3S7 1137 aa12.45□□□□□ -0.42
COL2A1-208ENST00000493991 STAG2Q8N3U4 1231 aa12.45□□□□□ -0.42
COL2A1-208ENST00000493991 TMEM87AQ8NBN3 555 aa12.45□□□□□ -0.42
COL2A1-208ENST00000493991 CALCOCO1Q9P1Z2 691 aa12.45□□□□□ -0.42
COL2A1-208ENST00000493991 SAMM50Q9Y512 469 aa12.45□□□□□ -0.42
COL2A1-208ENST00000493991 MAEAQ7L5Y9 396 aa12.45□□□□□ -0.42
COL2A1-208ENST00000493991 CCDC148Q8NFR7 591 aa12.45□□□□□ -0.42
COL2A1-208ENST00000493991 SAMSN1Q9NSI8 373 aaKnown RBP12.45□□□□□ -0.42
COL2A1-208ENST00000493991 POLR3EQ9NVU0 708 aa12.45□□□□□ -0.42
COL2A1-208ENST00000493991 SEC31AO94979 1220 aaKnown RBP12.44□□□□□ -0.42
COL2A1-208ENST00000493991 MMP1P03956 469 aa12.44□□□□□ -0.42
COL2A1-208ENST00000493991 MMP10P09238 476 aa12.44□□□□□ -0.42
COL2A1-208ENST00000493991 CASQ1P31415 396 aa12.44□□□□□ -0.42
COL2A1-208ENST00000493991 GYS2P54840 703 aa12.44□□□□□ -0.42
COL2A1-208ENST00000493991 WDR78Q5VTH9 848 aa12.44□□□□□ -0.42
COL2A1-208ENST00000493991 KANK3Q6NY19 840 aa12.44□□□□□ -0.42
COL2A1-208ENST00000493991 IGDCC4Q8TDY8 1250 aa12.44□□□□□ -0.42
COL2A1-208ENST00000493991 PP2D1A8MPX8 630 aa12.44□□□□□ -0.42
COL2A1-208ENST00000493991 FMNL1O95466 1100 aaPredicted RBP12.44□□□□□ -0.42
COL2A1-208ENST00000493991 CCDC40Q4G0X9 1142 aa12.44□□□□□ -0.42
COL2A1-208ENST00000493991 CTR9Q6PD62 1173 aa12.44□□□□□ -0.42
COL2A1-208ENST00000493991 OGFOD1Q8N543 542 aa12.44□□□□□ -0.42
COL2A1-208ENST00000493991 IGSF22Q8N9C0 903 aa12.44□□□□□ -0.42
COL2A1-208ENST00000493991 RBM28Q9NW13 759 aaKnown RBP12.44□□□□□ -0.42
COL2A1-208ENST00000493991 C3P01024 1663 aa12.44□□□□□ -0.42
COL2A1-208ENST00000493991 PXDNLA1KZ92 1463 aa12.44□□□□□ -0.42
COL2A1-208ENST00000493991 GDF11O95390 407 aa12.44□□□□□ -0.42
COL2A1-208ENST00000493991 SLC1A4P43007 532 aa12.44□□□□□ -0.42
COL2A1-208ENST00000493991 RASGRP2Q7LDG7 609 aa12.44□□□□□ -0.42
COL2A1-208ENST00000493991 CPXCR1Q8N123 301 aa12.44□□□□□ -0.42
COL2A1-208ENST00000493991 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.44□□□□□ -0.42
COL2A1-208ENST00000493991 RHOXF2BP0C7M4 288 aa12.43□□□□□ -0.42
COL2A1-208ENST00000493991 BLIDQ8IZY5 108 aa12.43□□□□□ -0.42
COL2A1-208ENST00000493991 GDAP1L1Q96MZ0 367 aa12.43□□□□□ -0.42
COL2A1-208ENST00000493991 RHOXF2Q9BQY4 288 aa12.43□□□□□ -0.42
COL2A1-208ENST00000493991 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.43□□□□□ -0.42
COL2A1-208ENST00000493991 GUCA1BQ9UMX6 200 aa12.43□□□□□ -0.42
COL2A1-208ENST00000493991 DLG5Q8TDM6 1919 aa12.43□□□□□ -0.42
COL2A1-208ENST00000493991 PIK3C2AO00443 1686 aa12.43□□□□□ -0.42
COL2A1-208ENST00000493991 ANKRD65E5RJM6 399 aa12.43□□□□□ -0.42
COL2A1-208ENST00000493991 ZSCAN12O43309 604 aa12.43□□□□□ -0.42
COL2A1-208ENST00000493991 SLURP2P0DP57 97 aa12.43□□□□□ -0.42
COL2A1-208ENST00000493991 CACNB1Q02641 598 aaPredicted RBP12.43□□□□□ -0.42
COL2A1-208ENST00000493991 PDE4DQ08499 809 aa12.43□□□□□ -0.42
COL2A1-208ENST00000493991 HOMER2Q9NSB8 354 aa12.43□□□□□ -0.42
COL2A1-208ENST00000493991 ARPP21Q9UBL0 812 aaPredicted RBP12.43□□□□□ -0.42
COL2A1-208ENST00000493991 TCP10L2B9ZVM9 353 aa12.43□□□□□ -0.42
COL2A1-208ENST00000493991 KIF5CO60282 957 aa12.43□□□□□ -0.42
COL2A1-208ENST00000493991 LIFRP42702 1097 aa12.43□□□□□ -0.42
COL2A1-208ENST00000493991 UBXN2AP68543 259 aa12.43□□□□□ -0.42
COL2A1-208ENST00000493991 SHC4Q6S5L8 630 aa12.43□□□□□ -0.42
COL2A1-208ENST00000493991 CLEC4GQ6UXB4 293 aa12.43□□□□□ -0.42
COL2A1-208ENST00000493991 LRRC8AQ8IWT6 810 aa12.43□□□□□ -0.42
COL2A1-208ENST00000493991 NELFCDQ8IXH7 590 aa12.43□□□□□ -0.42
COL2A1-208ENST00000493991 CCDC150Q8NCX0 1101 aa12.43□□□□□ -0.42
COL2A1-208ENST00000493991 PSMB7Q99436 277 aa12.43□□□□□ -0.42
COL2A1-208ENST00000493991 CAMTA1Q9Y6Y1 1673 aa12.42□□□□□ -0.42
COL2A1-208ENST00000493991 PRR29P0C7W0 189 aa12.42□□□□□ -0.42
COL2A1-208ENST00000493991 FMR1NBQ8N0W7 255 aaPredicted RBP12.42□□□□□ -0.42
COL2A1-208ENST00000493991 PIGSQ96S52 555 aa12.42□□□□□ -0.42
COL2A1-208ENST00000493991 BAG1Q99933 345 aaPredicted RBP12.42□□□□□ -0.42
COL2A1-208ENST00000493991 ZCCHC17Q9NP64 241 aaKnown RBP12.42□□□□□ -0.42
COL2A1-208ENST00000493991 XDHP47989 1333 aa12.42□□□□□ -0.42
COL2A1-208ENST00000493991 COL5A2P05997 1499 aaPredicted RBP12.42□□□□□ -0.42
COL2A1-208ENST00000493991 TMEM232C9JQI7 657 aa12.42□□□□□ -0.42
COL2A1-208ENST00000493991 EVCP57679 992 aa12.42□□□□□ -0.42
COL2A1-208ENST00000493991 TAF3Q5VWG9 929 aa12.42□□□□□ -0.42
COL2A1-208ENST00000493991 PSMA7O14818 248 aa12.42□□□□□ -0.42
COL2A1-208ENST00000493991 RAD17O75943 681 aa12.42□□□□□ -0.42
COL2A1-208ENST00000493991 KRT27Q7Z3Y8 459 aa12.42□□□□□ -0.42
COL2A1-208ENST00000493991 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.42□□□□□ -0.42
COL2A1-208ENST00000493991 CAPZA3Q96KX2 299 aa12.42□□□□□ -0.42
COL2A1-208ENST00000493991 PLA2G12BQ9BX93 195 aa12.42□□□□□ -0.42
COL2A1-208ENST00000493991 CENPHQ9H3R5 247 aa12.42□□□□□ -0.42
COL2A1-208ENST00000493991 DDX39AO00148 427 aaKnown RBP12.41□□□□□ -0.42
COL2A1-208ENST00000493991 NEMFO60524 1076 aa12.41□□□□□ -0.42
COL2A1-208ENST00000493991 PLCG2P16885 1265 aa12.41□□□□□ -0.42
COL2A1-208ENST00000493991 GNA11P29992 359 aa12.41□□□□□ -0.42
COL2A1-208ENST00000493991 HSPA1LP34931 641 aa12.41□□□□□ -0.42
COL2A1-208ENST00000493991 TBC1D10BQ4KMP7 808 aaPredicted RBP12.41□□□□□ -0.42
COL2A1-208ENST00000493991 ZFYVE27Q5T4F4 411 aa12.41□□□□□ -0.42
COL2A1-208ENST00000493991 TDRD7Q8NHU6 1098 aaKnown RBP12.41□□□□□ -0.42
COL2A1-208ENST00000493991 NKX2-3Q8TAU0 364 aa12.41□□□□□ -0.42
COL2A1-208ENST00000493991 NSUN4Q96CB9 384 aaKnown RBP12.41□□□□□ -0.42
COL2A1-208ENST00000493991 RAB34Q9BZG1 259 aa12.41□□□□□ -0.42
COL2A1-208ENST00000493991 PLEKHA4Q9H4M7 779 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms