RNA–Protein interactions for RNA: ENST00000493271.1

SNRNP200-207, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 3

Gene SNRNP200, Length 585 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-207ENST00000493271 LAMA2P24043 3122 aaKnown RBP13.34□□□□□ -0.27
SNRNP200-207ENST00000493271 SMAD3P84022 425 aaKnown RBP13.34□□□□□ -0.27
SNRNP200-207ENST00000493271 GABPAQ06546 454 aa13.34□□□□□ -0.27
SNRNP200-207ENST00000493271 SLC39A5Q6ZMH5 540 aa13.34□□□□□ -0.27
SNRNP200-207ENST00000493271 TMEM179Q6ZVK1 233 aa13.34□□□□□ -0.27
SNRNP200-207ENST00000493271 FTSJ3Q8IY81 847 aaKnown RBP13.34□□□□□ -0.27
SNRNP200-207ENST00000493271 RIOK1Q9BRS2 568 aaKnown RBP13.34□□□□□ -0.27
SNRNP200-207ENST00000493271 CCDC8Q9H0W5 538 aaPredicted RBP13.34□□□□□ -0.27
SNRNP200-207ENST00000493271 SWAP70Q9UH65 585 aa13.34□□□□□ -0.27
SNRNP200-207ENST00000493271 ATP11BQ9Y2G3 1177 aa13.34□□□□□ -0.27
SNRNP200-207ENST00000493271 MYO5AQ9Y4I1 1855 aaKnown RBP13.33□□□□□ -0.27
SNRNP200-207ENST00000493271 TMEM265A0A087WTH1 108 aa13.33□□□□□ -0.28
SNRNP200-207ENST00000493271 MAGEB6P1A0A0J9YX57 407 aa13.33□□□□□ -0.28
SNRNP200-207ENST00000493271 GUCY1A2P33402 732 aa13.33□□□□□ -0.28
SNRNP200-207ENST00000493271 PLCD1P51178 756 aa13.33□□□□□ -0.28
SNRNP200-207ENST00000493271 SEPT2Q15019 361 aa13.33□□□□□ -0.28
SNRNP200-207ENST00000493271 HSP90AB4PQ58FF6 505 aa13.33□□□□□ -0.28
SNRNP200-207ENST00000493271 TRPV1Q8NER1 839 aa13.33□□□□□ -0.28
SNRNP200-207ENST00000493271 TANGO6Q9C0B7 1094 aa13.33□□□□□ -0.28
SNRNP200-207ENST00000493271 TLR7Q9NYK1 1049 aaKnown RBP13.33□□□□□ -0.28
SNRNP200-207ENST00000493271 TNNQ9UQP3 1299 aa13.33□□□□□ -0.28
SNRNP200-207ENST00000493271 LTBP2Q14767 1821 aa13.33□□□□□ -0.28
SNRNP200-207ENST00000493271 A0A0G2JMZ2 1700 aa13.33□□□□□ -0.28
SNRNP200-207ENST00000493271 MPHOSPH10O00566 681 aaKnown RBP13.32□□□□□ -0.28
SNRNP200-207ENST00000493271 SLC25A27O95847 323 aa13.32□□□□□ -0.28
SNRNP200-207ENST00000493271 ERCC3P19447 782 aa13.32□□□□□ -0.28
SNRNP200-207ENST00000493271 GJC2Q5T442 439 aaPredicted RBP13.32□□□□□ -0.28
SNRNP200-207ENST00000493271 ARHGEF10LQ9HCE6 1279 aa13.32□□□□□ -0.28
SNRNP200-207ENST00000493271 MCM9Q9NXL9 1143 aa13.32□□□□□ -0.28
SNRNP200-207ENST00000493271 RLFQ13129 1914 aa13.32□□□□□ -0.28
SNRNP200-207ENST00000493271 A0A1W2PRG0 241 aa13.31□□□□□ -0.28
SNRNP200-207ENST00000493271 FCER1AP12319 257 aa13.31□□□□□ -0.28
SNRNP200-207ENST00000493271 DSG3P32926 999 aa13.31□□□□□ -0.28
SNRNP200-207ENST00000493271 COPB2P35606 906 aa13.31□□□□□ -0.28
SNRNP200-207ENST00000493271 SHHQ15465 462 aa13.31□□□□□ -0.28
SNRNP200-207ENST00000493271 SLC9C2Q5TAH2 1124 aa13.31□□□□□ -0.28
SNRNP200-207ENST00000493271 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.31□□□□□ -0.28
SNRNP200-207ENST00000493271 CCDC17Q96LX7 622 aa13.31□□□□□ -0.28
SNRNP200-207ENST00000493271 ANTXR1Q9H6X2 564 aa13.31□□□□□ -0.28
SNRNP200-207ENST00000493271 PRDM5Q9NQX1 630 aaPredicted RBP13.31□□□□□ -0.28
SNRNP200-207ENST00000493271 DIS3Q9Y2L1 958 aaKnown RBP13.31□□□□□ -0.28
SNRNP200-207ENST00000493271 TACC3Q9Y6A5 838 aa13.31□□□□□ -0.28
SNRNP200-207ENST00000493271 NAV1Q8NEY1 1877 aa13.31□□□□□ -0.28
SNRNP200-207ENST00000493271 ROBO3Q96MS0 1386 aa13.31□□□□□ -0.28
SNRNP200-207ENST00000493271 WDR46O15213 610 aaKnown RBP13.3□□□□□ -0.28
SNRNP200-207ENST00000493271 RARBP10826 455 aa13.3□□□□□ -0.28
SNRNP200-207ENST00000493271 LRRC41Q15345 812 aa13.3□□□□□ -0.28
SNRNP200-207ENST00000493271 TRIM60Q495X7 471 aa13.3□□□□□ -0.28
SNRNP200-207ENST00000493271 RNF180Q86T96 592 aa13.3□□□□□ -0.28
SNRNP200-207ENST00000493271 AACSQ86V21 672 aa13.3□□□□□ -0.28
SNRNP200-207ENST00000493271 NCAPG2Q86XI2 1143 aa13.3□□□□□ -0.28
SNRNP200-207ENST00000493271 ITPRIPQ8IWB1 547 aa13.3□□□□□ -0.28
SNRNP200-207ENST00000493271 AMOTL1Q8IY63 956 aa13.3□□□□□ -0.28
SNRNP200-207ENST00000493271 MAML3Q96JK9 1138 aa13.3□□□□□ -0.28
SNRNP200-207ENST00000493271 FAM161BQ96MY7 647 aa13.3□□□□□ -0.28
SNRNP200-207ENST00000493271 CDX2Q99626 313 aaPredicted RBP13.3□□□□□ -0.28
SNRNP200-207ENST00000493271 SEMA6BQ9H3T3 888 aa13.3□□□□□ -0.28
SNRNP200-207ENST00000493271 PDLIM7Q9NR12 457 aa13.3□□□□□ -0.28
SNRNP200-207ENST00000493271 ATP8A2Q9NTI2 1148 aa13.3□□□□□ -0.28
SNRNP200-207ENST00000493271 PHF24Q9UPV7 400 aa13.3□□□□□ -0.28
SNRNP200-207ENST00000493271 TMX2Q9Y320 296 aa13.3□□□□□ -0.28
SNRNP200-207ENST00000493271 COBLO75128 1261 aa13.29□□□□□ -0.28
SNRNP200-207ENST00000493271 FLOT1O75955 427 aa13.29□□□□□ -0.28
SNRNP200-207ENST00000493271 PDE6AP16499 860 aa13.29□□□□□ -0.28
SNRNP200-207ENST00000493271 ADCYAP1R1P41586 468 aa13.29□□□□□ -0.28
SNRNP200-207ENST00000493271 PLS1Q14651 629 aa13.29□□□□□ -0.28
SNRNP200-207ENST00000493271 CEP85Q6P2H3 762 aa13.29□□□□□ -0.28
SNRNP200-207ENST00000493271 MAFAQ8NHW3 353 aaPredicted RBP13.29□□□□□ -0.28
SNRNP200-207ENST00000493271 SYMPKQ92797 1274 aaKnown RBP13.29□□□□□ -0.28
SNRNP200-207ENST00000493271 BADQ92934 168 aa13.29□□□□□ -0.28
SNRNP200-207ENST00000493271 C1orf115Q9H7X2 142 aa13.29□□□□□ -0.28
SNRNP200-207ENST00000493271 VCPKMTQ9H867 229 aa13.29□□□□□ -0.28
SNRNP200-207ENST00000493271 DCP1AQ9NPI6 582 aaPredicted RBP13.29□□□□□ -0.28
SNRNP200-207ENST00000493271 CLTBP09497 229 aa13.28□□□□□ -0.28
SNRNP200-207ENST00000493271 ICA1Q05084 483 aa13.28□□□□□ -0.28
SNRNP200-207ENST00000493271 C9orf50Q5SZB4 431 aa13.28□□□□□ -0.28
SNRNP200-207ENST00000493271 CLASRPQ8N2M8 674 aaKnown RBP13.28□□□□□ -0.28
SNRNP200-207ENST00000493271 MSL3Q8N5Y2 521 aaKnown RBP13.28□□□□□ -0.28
SNRNP200-207ENST00000493271 DDRGK1Q96HY6 314 aa13.28□□□□□ -0.28
SNRNP200-207ENST00000493271 XPNPEP3Q9NQH7 507 aa13.28□□□□□ -0.28
SNRNP200-207ENST00000493271 ADAMTS5Q9UNA0 930 aa13.28□□□□□ -0.28
SNRNP200-207ENST00000493271 ZNF532Q9HCE3 1301 aa13.28□□□□□ -0.28
SNRNP200-207ENST00000493271 KIAA0355O15063 1070 aa13.27□□□□□ -0.29
SNRNP200-207ENST00000493271 MYCNP04198 464 aaPredicted RBP13.27□□□□□ -0.29
SNRNP200-207ENST00000493271 AKR1A1P14550 325 aa13.27□□□□□ -0.29
SNRNP200-207ENST00000493271 TLE2Q04725 743 aa13.27□□□□□ -0.29
SNRNP200-207ENST00000493271 KCTD2Q14681 263 aa13.27□□□□□ -0.29
SNRNP200-207ENST00000493271 FAM47AQ5JRC9 791 aa13.27□□□□□ -0.29
SNRNP200-207ENST00000493271 ANO1Q5XXA6 986 aa13.27□□□□□ -0.29
SNRNP200-207ENST00000493271 RIOX2Q8IUF8 465 aa13.27□□□□□ -0.29
SNRNP200-207ENST00000493271 ATG4CQ96DT6 458 aa13.27□□□□□ -0.29
SNRNP200-207ENST00000493271 TOX2Q96NM4 488 aa13.27□□□□□ -0.29
SNRNP200-207ENST00000493271 MMP19Q99542 508 aa13.27□□□□□ -0.29
SNRNP200-207ENST00000493271 TINF2Q9BSI4 451 aa13.27□□□□□ -0.29
SNRNP200-207ENST00000493271 TSEN34Q9BSV6 310 aaKnown RBP13.27□□□□□ -0.29
SNRNP200-207ENST00000493271 EXOC6BQ9Y2D4 811 aa13.27□□□□□ -0.29
SNRNP200-207ENST00000493271 TCRBV5S4A2TA0A5A2 114 aa13.26□□□□□ -0.29
SNRNP200-207ENST00000493271 TRIM43BA6NCK2 446 aa13.26□□□□□ -0.29
SNRNP200-207ENST00000493271 FOSL2P15408 326 aa13.26□□□□□ -0.29
SNRNP200-207ENST00000493271 RAG1P15918 1043 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms