RNA–Protein interactions for RNA: ENST00000492772.1

SND1-215, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-215ENST00000492772 MB21D1Q8N884 522 aa13.37□□□□□ -0.27
SND1-215ENST00000492772 EAF2Q96CJ1 260 aaPredicted RBP13.37□□□□□ -0.27
SND1-215ENST00000492772 FAM161BQ96MY7 647 aa13.37□□□□□ -0.27
SND1-215ENST00000492772 RIOK1Q9BRS2 568 aaKnown RBP13.37□□□□□ -0.27
SND1-215ENST00000492772 MOV10L1Q9BXT6 1211 aaKnown RBP13.37□□□□□ -0.27
SND1-215ENST00000492772 TANGO6Q9C0B7 1094 aa13.37□□□□□ -0.27
SND1-215ENST00000492772 SPATC1LQ9H0A9 340 aa13.37□□□□□ -0.27
SND1-215ENST00000492772 PRDM5Q9NQX1 630 aaPredicted RBP13.37□□□□□ -0.27
SND1-215ENST00000492772 MPHOSPH10O00566 681 aaKnown RBP13.36□□□□□ -0.27
SND1-215ENST00000492772 GUCY1A2P33402 732 aa13.36□□□□□ -0.27
SND1-215ENST00000492772 PLCD1P51178 756 aa13.36□□□□□ -0.27
SND1-215ENST00000492772 GABPAQ06546 454 aa13.36□□□□□ -0.27
SND1-215ENST00000492772 SEPT2Q15019 361 aa13.36□□□□□ -0.27
SND1-215ENST00000492772 SLC39A5Q6ZMH5 540 aa13.36□□□□□ -0.27
SND1-215ENST00000492772 ERC1Q8IUD2 1116 aa13.36□□□□□ -0.27
SND1-215ENST00000492772 FTSJ3Q8IY81 847 aaKnown RBP13.36□□□□□ -0.27
SND1-215ENST00000492772 ABRAQ8N0Z2 381 aa13.36□□□□□ -0.27
SND1-215ENST00000492772 CRNKL1Q9BZJ0 848 aaKnown RBP13.36□□□□□ -0.27
SND1-215ENST00000492772 MROH8Q9H579 483 aa13.36□□□□□ -0.27
SND1-215ENST00000492772 C1orf115Q9H7X2 142 aa13.36□□□□□ -0.27
SND1-215ENST00000492772 MAGEB6P1A0A0J9YX57 407 aa13.35□□□□□ -0.27
SND1-215ENST00000492772 ERCC3P19447 782 aa13.35□□□□□ -0.27
SND1-215ENST00000492772 SMAD3P84022 425 aaKnown RBP13.35□□□□□ -0.27
SND1-215ENST00000492772 TTF1Q15361 905 aaPredicted RBP13.35□□□□□ -0.27
SND1-215ENST00000492772 SHHQ15465 462 aa13.35□□□□□ -0.27
SND1-215ENST00000492772 TRIM60Q495X7 471 aa13.35□□□□□ -0.27
SND1-215ENST00000492772 C1orf53Q5VUE5 145 aa13.35□□□□□ -0.27
SND1-215ENST00000492772 TMEM179Q6ZVK1 233 aa13.35□□□□□ -0.27
SND1-215ENST00000492772 CDX2Q99626 313 aaPredicted RBP13.35□□□□□ -0.27
SND1-215ENST00000492772 ANTXR1Q9H6X2 564 aa13.35□□□□□ -0.27
SND1-215ENST00000492772 SH2D4AQ9H788 454 aa13.35□□□□□ -0.27
SND1-215ENST00000492772 PDLIM7Q9NR12 457 aa13.35□□□□□ -0.27
SND1-215ENST00000492772 ROBO3Q96MS0 1386 aa13.34□□□□□ -0.27
SND1-215ENST00000492772 EYSQ5T1H1 3165 aa13.34□□□□□ -0.27
SND1-215ENST00000492772 CCER2I3L3R5 266 aa13.34□□□□□ -0.27
SND1-215ENST00000492772 C9orf50Q5SZB4 431 aa13.34□□□□□ -0.27
SND1-215ENST00000492772 AACSQ86V21 672 aa13.34□□□□□ -0.27
SND1-215ENST00000492772 MAFAQ8NHW3 353 aaPredicted RBP13.34□□□□□ -0.27
SND1-215ENST00000492772 MCM9Q9NXL9 1143 aa13.34□□□□□ -0.27
SND1-215ENST00000492772 SWAP70Q9UH65 585 aa13.34□□□□□ -0.27
SND1-215ENST00000492772 NRBP1Q9UHY1 535 aa13.34□□□□□ -0.27
SND1-215ENST00000492772 PLXNA1Q9UIW2 1896 aa13.33□□□□□ -0.27
SND1-215ENST00000492772 A0A1W2PRG0 241 aa13.33□□□□□ -0.28
SND1-215ENST00000492772 COBLO75128 1261 aa13.33□□□□□ -0.28
SND1-215ENST00000492772 FLOT1O75955 427 aa13.33□□□□□ -0.28
SND1-215ENST00000492772 MYCNP04198 464 aaPredicted RBP13.33□□□□□ -0.28
SND1-215ENST00000492772 PDE6AP16499 860 aa13.33□□□□□ -0.28
SND1-215ENST00000492772 DSG3P32926 999 aa13.33□□□□□ -0.28
SND1-215ENST00000492772 ADCYAP1R1P41586 468 aa13.33□□□□□ -0.28
SND1-215ENST00000492772 PLS1Q14651 629 aa13.33□□□□□ -0.28
SND1-215ENST00000492772 LRRC41Q15345 812 aa13.33□□□□□ -0.28
SND1-215ENST00000492772 ANO1Q5XXA6 986 aa13.33□□□□□ -0.28
SND1-215ENST00000492772 NCAPG2Q86XI2 1143 aa13.33□□□□□ -0.28
SND1-215ENST00000492772 ITPRIPQ8IWB1 547 aa13.33□□□□□ -0.28
SND1-215ENST00000492772 BADQ92934 168 aa13.33□□□□□ -0.28
SND1-215ENST00000492772 MAML3Q96JK9 1138 aa13.33□□□□□ -0.28
SND1-215ENST00000492772 SEMA6BQ9H3T3 888 aa13.33□□□□□ -0.28
SND1-215ENST00000492772 ARHGEF10LQ9HCE6 1279 aa13.33□□□□□ -0.28
SND1-215ENST00000492772 COL11A1P12107 1806 aaPredicted RBP13.33□□□□□ -0.28
SND1-215ENST00000492772 TMEM265A0A087WTH1 108 aa13.32□□□□□ -0.28
SND1-215ENST00000492772 WDR46O15213 610 aaKnown RBP13.32□□□□□ -0.28
SND1-215ENST00000492772 SLC25A27O95847 323 aa13.32□□□□□ -0.28
SND1-215ENST00000492772 FCER1AP12319 257 aa13.32□□□□□ -0.28
SND1-215ENST00000492772 FAM47AQ5JRC9 791 aa13.32□□□□□ -0.28
SND1-215ENST00000492772 SLC9C2Q5TAH2 1124 aa13.32□□□□□ -0.28
SND1-215ENST00000492772 PHF24Q9UPV7 400 aa13.32□□□□□ -0.28
SND1-215ENST00000492772 ZNFX1Q9P2E3 1918 aaKnown RBP13.32□□□□□ -0.28
SND1-215ENST00000492772 SPTBN5Q9NRC6 3674 aaKnown RBP13.31□□□□□ -0.28
SND1-215ENST00000492772 TRIM43BA6NCK2 446 aa13.31□□□□□ -0.28
SND1-215ENST00000492772 RARBP10826 455 aa13.31□□□□□ -0.28
SND1-215ENST00000492772 ICA1Q05084 483 aa13.31□□□□□ -0.28
SND1-215ENST00000492772 HSP90AB4PQ58FF6 505 aa13.31□□□□□ -0.28
SND1-215ENST00000492772 CEP85Q6P2H3 762 aa13.31□□□□□ -0.28
SND1-215ENST00000492772 RNF180Q86T96 592 aa13.31□□□□□ -0.28
SND1-215ENST00000492772 FERMT2Q96AC1 680 aa13.31□□□□□ -0.28
SND1-215ENST00000492772 TRIM43Q96BQ3 446 aaPredicted RBP13.31□□□□□ -0.28
SND1-215ENST00000492772 ATG4CQ96DT6 458 aa13.31□□□□□ -0.28
SND1-215ENST00000492772 VCPKMTQ9H867 229 aa13.31□□□□□ -0.28
SND1-215ENST00000492772 DCP1AQ9NPI6 582 aaPredicted RBP13.31□□□□□ -0.28
SND1-215ENST00000492772 XPNPEP3Q9NQH7 507 aa13.31□□□□□ -0.28
SND1-215ENST00000492772 TMX2Q9Y320 296 aa13.31□□□□□ -0.28
SND1-215ENST00000492772 ZNF532Q9HCE3 1301 aa13.31□□□□□ -0.28
SND1-215ENST00000492772 VCANP13611 3396 aa13.31□□□□□ -0.28
SND1-215ENST00000492772 PRUNE2Q8WUY3 3088 aa13.3□□□□□ -0.28
SND1-215ENST00000492772 CLTBP09497 229 aa13.3□□□□□ -0.28
SND1-215ENST00000492772 FOSL2P15408 326 aa13.3□□□□□ -0.28
SND1-215ENST00000492772 COPB2P35606 906 aa13.3□□□□□ -0.28
SND1-215ENST00000492772 EVX2Q03828 476 aa13.3□□□□□ -0.28
SND1-215ENST00000492772 TLE2Q04725 743 aa13.3□□□□□ -0.28
SND1-215ENST00000492772 KIAA1755Q5JYT7 1200 aa13.3□□□□□ -0.28
SND1-215ENST00000492772 PRAMEF19Q5SWL8 479 aa13.3□□□□□ -0.28
SND1-215ENST00000492772 SH3RF1Q7Z6J0 888 aa13.3□□□□□ -0.28
SND1-215ENST00000492772 LCORLQ8N3X6 602 aa13.3□□□□□ -0.28
SND1-215ENST00000492772 SLC44A5Q8NCS7 719 aa13.3□□□□□ -0.28
SND1-215ENST00000492772 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.3□□□□□ -0.28
SND1-215ENST00000492772 SDR42E1Q8WUS8 393 aa13.3□□□□□ -0.28
SND1-215ENST00000492772 MYLIPQ8WY64 445 aa13.3□□□□□ -0.28
SND1-215ENST00000492772 RNPC3Q96LT9 517 aaKnown RBP13.3□□□□□ -0.28
SND1-215ENST00000492772 TTYH1Q9H313 450 aaPredicted RBP13.3□□□□□ -0.28
SND1-215ENST00000492772 EXOC6BQ9Y2D4 811 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms