RNA–Protein interactions for RNA: ENST00000492512.1

GPNMB-213, Transcript of glycoprotein nmb, humanhuman

TSL 3

Gene GPNMB, Length 447 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-213ENST00000492512 SURF6O75683 361 aaKnown RBP16.7■□□□□ 0.26
GPNMB-213ENST00000492512 FOSL2P15408 326 aa16.7■□□□□ 0.26
GPNMB-213ENST00000492512 SHMT1P34896 483 aa16.7■□□□□ 0.26
GPNMB-213ENST00000492512 POLA2Q14181 598 aa16.7■□□□□ 0.26
GPNMB-213ENST00000492512 COG2Q14746 738 aa16.7■□□□□ 0.26
GPNMB-213ENST00000492512 SNX17Q15036 470 aa16.7■□□□□ 0.26
GPNMB-213ENST00000492512 FRAT1Q92837 279 aaPredicted RBP16.7■□□□□ 0.26
GPNMB-213ENST00000492512 FERMT2Q96AC1 680 aa16.7■□□□□ 0.26
GPNMB-213ENST00000492512 CLUAP1Q96AJ1 413 aa16.7■□□□□ 0.26
GPNMB-213ENST00000492512 TANGO6Q9C0B7 1094 aa16.7■□□□□ 0.26
GPNMB-213ENST00000492512 SPATC1LQ9H0A9 340 aa16.7■□□□□ 0.26
GPNMB-213ENST00000492512 TTYH1Q9H313 450 aaPredicted RBP16.7■□□□□ 0.26
GPNMB-213ENST00000492512 DBNLQ9UJU6 430 aaKnown RBP16.7■□□□□ 0.26
GPNMB-213ENST00000492512 TNNQ9UQP3 1299 aa16.7■□□□□ 0.26
GPNMB-213ENST00000492512 ERCC3P19447 782 aa16.69■□□□□ 0.26
GPNMB-213ENST00000492512 PLCD1P51178 756 aa16.69■□□□□ 0.26
GPNMB-213ENST00000492512 SEPT2Q15019 361 aa16.69■□□□□ 0.26
GPNMB-213ENST00000492512 LRRC41Q15345 812 aa16.69■□□□□ 0.26
GPNMB-213ENST00000492512 SH3RF1Q7Z6J0 888 aa16.69■□□□□ 0.26
GPNMB-213ENST00000492512 SHCBP1Q8NEM2 672 aa16.69■□□□□ 0.26
GPNMB-213ENST00000492512 PRDM6Q9NQX0 595 aa16.69■□□□□ 0.26
GPNMB-213ENST00000492512 NAV1Q8NEY1 1877 aa16.68■□□□□ 0.26
GPNMB-213ENST00000492512 TRIM43BA6NCK2 446 aa16.68■□□□□ 0.26
GPNMB-213ENST00000492512 MPHOSPH10O00566 681 aaKnown RBP16.68■□□□□ 0.26
GPNMB-213ENST00000492512 COBLO75128 1261 aa16.68■□□□□ 0.26
GPNMB-213ENST00000492512 POLR3DP05423 398 aaPredicted RBP16.68■□□□□ 0.26
GPNMB-213ENST00000492512 GUCY1A2P33402 732 aa16.68■□□□□ 0.26
GPNMB-213ENST00000492512 MAP3K12Q12852 859 aa16.68■□□□□ 0.26
GPNMB-213ENST00000492512 PLS1Q14651 629 aa16.68■□□□□ 0.26
GPNMB-213ENST00000492512 PRAMEF19Q5SWL8 479 aa16.68■□□□□ 0.26
GPNMB-213ENST00000492512 SSH3Q8TE77 659 aa16.68■□□□□ 0.26
GPNMB-213ENST00000492512 SYMPKQ92797 1274 aaKnown RBP16.68■□□□□ 0.26
GPNMB-213ENST00000492512 TRIM43Q96BQ3 446 aaPredicted RBP16.68■□□□□ 0.26
GPNMB-213ENST00000492512 CCDC8Q9H0W5 538 aaPredicted RBP16.68■□□□□ 0.26
GPNMB-213ENST00000492512 TLR7Q9NYK1 1049 aaKnown RBP16.68■□□□□ 0.26
GPNMB-213ENST00000492512 A0A0G2JMZ2 1700 aa16.67■□□□□ 0.26
GPNMB-213ENST00000492512 BCAR3O75815 825 aa16.67■□□□□ 0.26
GPNMB-213ENST00000492512 TLE2Q04725 743 aa16.67■□□□□ 0.26
GPNMB-213ENST00000492512 FAM47AQ5JRC9 791 aa16.67■□□□□ 0.26
GPNMB-213ENST00000492512 C1orf53Q5VUE5 145 aa16.67■□□□□ 0.26
GPNMB-213ENST00000492512 NCAPG2Q86XI2 1143 aa16.67■□□□□ 0.26
GPNMB-213ENST00000492512 MB21D1Q8N884 522 aa16.67■□□□□ 0.26
GPNMB-213ENST00000492512 RNPC3Q96LT9 517 aaKnown RBP16.67■□□□□ 0.26
GPNMB-213ENST00000492512 MROH8Q9H579 483 aa16.67■□□□□ 0.26
GPNMB-213ENST00000492512 TACC3Q9Y6A5 838 aa16.67■□□□□ 0.26
GPNMB-213ENST00000492512 MYH8P13535 1937 aa16.66■□□□□ 0.26
GPNMB-213ENST00000492512 TMEM265A0A087WTH1 108 aa16.66■□□□□ 0.26
GPNMB-213ENST00000492512 A0A1W2PRG0 241 aa16.66■□□□□ 0.26
GPNMB-213ENST00000492512 ATP8B2P98198 1209 aa16.66■□□□□ 0.26
GPNMB-213ENST00000492512 MYO9BQ13459 2157 aa16.66■□□□□ 0.26
GPNMB-213ENST00000492512 TMED8Q6PL24 325 aaPredicted RBP16.66■□□□□ 0.26
GPNMB-213ENST00000492512 ABRAQ8N0Z2 381 aa16.66■□□□□ 0.26
GPNMB-213ENST00000492512 MAML3Q96JK9 1138 aa16.66■□□□□ 0.26
GPNMB-213ENST00000492512 CLTBP09497 229 aa16.65■□□□□ 0.26
GPNMB-213ENST00000492512 RAG1P15918 1043 aa16.65■□□□□ 0.26
GPNMB-213ENST00000492512 GABPAQ06546 454 aa16.65■□□□□ 0.26
GPNMB-213ENST00000492512 TMEM57Q8N5G2 664 aa16.65■□□□□ 0.26
GPNMB-213ENST00000492512 EAF2Q96CJ1 260 aaPredicted RBP16.65■□□□□ 0.26
GPNMB-213ENST00000492512 ANTXR1Q9H6X2 564 aa16.65■□□□□ 0.26
GPNMB-213ENST00000492512 XPNPEP3Q9NQH7 507 aa16.65■□□□□ 0.26
GPNMB-213ENST00000492512 PHF24Q9UPV7 400 aa16.65■□□□□ 0.26
GPNMB-213ENST00000492512 MAGEB6P1A0A0J9YX57 407 aa16.64■□□□□ 0.25
GPNMB-213ENST00000492512 FLOT1O75955 427 aa16.64■□□□□ 0.25
GPNMB-213ENST00000492512 RARBP10826 455 aa16.64■□□□□ 0.25
GPNMB-213ENST00000492512 FCER1AP12319 257 aa16.64■□□□□ 0.25
GPNMB-213ENST00000492512 ITGB8P26012 769 aa16.64■□□□□ 0.25
GPNMB-213ENST00000492512 DSG3P32926 999 aa16.64■□□□□ 0.25
GPNMB-213ENST00000492512 SAMD1Q6SPF0 538 aaPredicted RBP16.64■□□□□ 0.25
GPNMB-213ENST00000492512 RNF180Q86T96 592 aa16.64■□□□□ 0.25
GPNMB-213ENST00000492512 RIOK1Q9BRS2 568 aaKnown RBP16.64■□□□□ 0.25
GPNMB-213ENST00000492512 CRNKL1Q9BZJ0 848 aaKnown RBP16.64■□□□□ 0.25
GPNMB-213ENST00000492512 C1orf115Q9H7X2 142 aa16.64■□□□□ 0.25
GPNMB-213ENST00000492512 MCM9Q9NXL9 1143 aa16.64■□□□□ 0.25
GPNMB-213ENST00000492512 NOP58Q9Y2X3 529 aaKnown RBP16.64■□□□□ 0.25
GPNMB-213ENST00000492512 PLXNA1Q9UIW2 1896 aa16.64■□□□□ 0.25
GPNMB-213ENST00000492512 COL11A1P12107 1806 aaPredicted RBP16.63■□□□□ 0.25
GPNMB-213ENST00000492512 KIAA1755Q5JYT7 1200 aa16.63■□□□□ 0.25
GPNMB-213ENST00000492512 ATG4CQ96DT6 458 aa16.63■□□□□ 0.25
GPNMB-213ENST00000492512 NRBP1Q9UHY1 535 aa16.63■□□□□ 0.25
GPNMB-213ENST00000492512 PARP14Q460N5 1801 aa16.63■□□□□ 0.25
GPNMB-213ENST00000492512 MUC3AQ02505 3323 aa16.63■□□□□ 0.25
GPNMB-213ENST00000492512 KIAA0355O15063 1070 aa16.62■□□□□ 0.25
GPNMB-213ENST00000492512 PQBP1O60828 265 aaKnown RBP16.62■□□□□ 0.25
GPNMB-213ENST00000492512 PGK1P00558 417 aa16.62■□□□□ 0.25
GPNMB-213ENST00000492512 EPHB4P54760 987 aa16.62■□□□□ 0.25
GPNMB-213ENST00000492512 EVX2Q03828 476 aa16.62■□□□□ 0.25
GPNMB-213ENST00000492512 FPGSQ05932 587 aa16.62■□□□□ 0.25
GPNMB-213ENST00000492512 TMEM179Q6ZVK1 233 aa16.62■□□□□ 0.25
GPNMB-213ENST00000492512 SPICE1Q8N0Z3 855 aa16.62■□□□□ 0.25
GPNMB-213ENST00000492512 ARHGEF10LQ9HCE6 1279 aa16.62■□□□□ 0.25
GPNMB-213ENST00000492512 TMEM39AQ9NV64 488 aa16.62■□□□□ 0.25
GPNMB-213ENST00000492512 A0A1W2PQ45 241 aaPredicted RBP16.61■□□□□ 0.25
GPNMB-213ENST00000492512 A0A1W2PQY0 241 aa16.61■□□□□ 0.25
GPNMB-213ENST00000492512 SLC25A27O95847 323 aa16.61■□□□□ 0.25
GPNMB-213ENST00000492512 GRIN2CQ14957 1233 aa16.61■□□□□ 0.25
GPNMB-213ENST00000492512 TJAP1Q5JTD0 557 aa16.61■□□□□ 0.25
GPNMB-213ENST00000492512 ZKSCAN2Q63HK3 967 aa16.61■□□□□ 0.25
GPNMB-213ENST00000492512 MMP19Q99542 508 aa16.61■□□□□ 0.25
GPNMB-213ENST00000492512 SH2D4AQ9H788 454 aa16.61■□□□□ 0.25
GPNMB-213ENST00000492512 NCOR1O75376 2440 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms