RNA–Protein interactions for RNA: ENST00000492407.1

HDAC3-212, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-212ENST00000492407 UBE3CQ15386 1083 aa11.02□□□□□ -0.65
HDAC3-212ENST00000492407 ZYXQ15942 572 aaKnown RBP11.02□□□□□ -0.65
HDAC3-212ENST00000492407 OLFML2BQ68BL8 750 aa11.02□□□□□ -0.65
HDAC3-212ENST00000492407 DIEXFQ68CQ4 756 aaKnown RBP11.02□□□□□ -0.65
HDAC3-212ENST00000492407 ZSCAN25Q6NSZ9 544 aa11.02□□□□□ -0.65
HDAC3-212ENST00000492407 AMOTL1Q8IY63 956 aa11.02□□□□□ -0.65
HDAC3-212ENST00000492407 C7orf61Q8IZ16 206 aa11.02□□□□□ -0.65
HDAC3-212ENST00000492407 DDRGK1Q96HY6 314 aa11.02□□□□□ -0.65
HDAC3-212ENST00000492407 MROH8Q9H579 483 aa11.02□□□□□ -0.65
HDAC3-212ENST00000492407 PAG1Q9NWQ8 432 aa11.02□□□□□ -0.65
HDAC3-212ENST00000492407 BTBD7Q9P203 1132 aa11.02□□□□□ -0.65
HDAC3-212ENST00000492407 TMX2Q9Y320 296 aa11.02□□□□□ -0.65
HDAC3-212ENST00000492407 PLXNB2O15031 1838 aa11.01□□□□□ -0.65
HDAC3-212ENST00000492407 A0A1W2PRG0 241 aa11.01□□□□□ -0.65
HDAC3-212ENST00000492407 PEX10O60683 326 aa11.01□□□□□ -0.65
HDAC3-212ENST00000492407 CCND3P30281 292 aaPredicted RBP11.01□□□□□ -0.65
HDAC3-212ENST00000492407 DSG3P32926 999 aa11.01□□□□□ -0.65
HDAC3-212ENST00000492407 ADD2P35612 726 aa11.01□□□□□ -0.65
HDAC3-212ENST00000492407 CCL14Q16627 93 aa11.01□□□□□ -0.65
HDAC3-212ENST00000492407 SIRT2Q8IXJ6 389 aa11.01□□□□□ -0.65
HDAC3-212ENST00000492407 DNAJC2Q99543 621 aaKnown RBP11.01□□□□□ -0.65
HDAC3-212ENST00000492407 HAUS7Q99871 368 aa11.01□□□□□ -0.65
HDAC3-212ENST00000492407 ARHGEF10LQ9HCE6 1279 aa11.01□□□□□ -0.65
HDAC3-212ENST00000492407 DDX20Q9UHI6 824 aaKnown RBP11.01□□□□□ -0.65
HDAC3-212ENST00000492407 PFASO15067 1338 aa11.01□□□□□ -0.65
HDAC3-212ENST00000492407 CDK5RAP2Q96SN8 1893 aa11□□□□□ -0.65
HDAC3-212ENST00000492407 MPHOSPH10O00566 681 aaKnown RBP11□□□□□ -0.65
HDAC3-212ENST00000492407 SLC25A27O95847 323 aa11□□□□□ -0.65
HDAC3-212ENST00000492407 C12orf60Q5U649 245 aa11□□□□□ -0.65
HDAC3-212ENST00000492407 WDR78Q5VTH9 848 aa11□□□□□ -0.65
HDAC3-212ENST00000492407 TDHQ8IZJ6 230 aa11□□□□□ -0.65
HDAC3-212ENST00000492407 LCORLQ8N3X6 602 aa11□□□□□ -0.65
HDAC3-212ENST00000492407 ARRDC4Q8NCT1 418 aa11□□□□□ -0.65
HDAC3-212ENST00000492407 MOV10L1Q9BXT6 1211 aaKnown RBP11□□□□□ -0.65
HDAC3-212ENST00000492407 SPATC1LQ9H0A9 340 aa11□□□□□ -0.65
HDAC3-212ENST00000492407 KANSL2Q9H9L4 492 aa11□□□□□ -0.65
HDAC3-212ENST00000492407 NRBP1Q9UHY1 535 aa11□□□□□ -0.65
HDAC3-212ENST00000492407 DOCK3Q8IZD9 2030 aa11□□□□□ -0.65
HDAC3-212ENST00000492407 DNM1LO00429 736 aa10.99□□□□□ -0.65
HDAC3-212ENST00000492407 WDR46O15213 610 aaKnown RBP10.99□□□□□ -0.65
HDAC3-212ENST00000492407 COPB2P35606 906 aa10.99□□□□□ -0.65
HDAC3-212ENST00000492407 MAGEA10P43363 369 aaPredicted RBP10.99□□□□□ -0.65
HDAC3-212ENST00000492407 GIMAP6Q6P9H5 292 aa10.99□□□□□ -0.65
HDAC3-212ENST00000492407 C16orf86Q6ZW13 317 aa10.99□□□□□ -0.65
HDAC3-212ENST00000492407 DPP9Q86TI2 863 aa10.99□□□□□ -0.65
HDAC3-212ENST00000492407 SIAH1Q8IUQ4 282 aa10.99□□□□□ -0.65
HDAC3-212ENST00000492407 SDR42E1Q8WUS8 393 aa10.99□□□□□ -0.65
HDAC3-212ENST00000492407 TANGO6Q9C0B7 1094 aa10.99□□□□□ -0.65
HDAC3-212ENST00000492407 VCPKMTQ9H867 229 aa10.99□□□□□ -0.65
HDAC3-212ENST00000492407 ARMT1Q9H993 441 aa10.99□□□□□ -0.65
HDAC3-212ENST00000492407 FLRT1Q9NZU1 646 aa10.99□□□□□ -0.65
HDAC3-212ENST00000492407 ZMYND8Q9ULU4 1186 aaPredicted RBP10.99□□□□□ -0.65
HDAC3-212ENST00000492407 ADAMTS5Q9UNA0 930 aa10.99□□□□□ -0.65
HDAC3-212ENST00000492407 COG6Q9Y2V7 657 aa10.99□□□□□ -0.65
HDAC3-212ENST00000492407 MYH1P12882 1939 aa10.99□□□□□ -0.65
HDAC3-212ENST00000492407 SZT2Q5T011 3432 aa10.98□□□□□ -0.65
HDAC3-212ENST00000492407 SOX1O00570 391 aaPredicted RBP10.98□□□□□ -0.65
HDAC3-212ENST00000492407 MBD4O95243 580 aa10.98□□□□□ -0.65
HDAC3-212ENST00000492407 CYBAP13498 195 aa10.98□□□□□ -0.65
HDAC3-212ENST00000492407 ERCC3P19447 782 aa10.98□□□□□ -0.65
HDAC3-212ENST00000492407 ADORA2AP29274 412 aa10.98□□□□□ -0.65
HDAC3-212ENST00000492407 CDK8P49336 464 aa10.98□□□□□ -0.65
HDAC3-212ENST00000492407 ICA1Q05084 483 aa10.98□□□□□ -0.65
HDAC3-212ENST00000492407 NPLOC4Q8TAT6 608 aa10.98□□□□□ -0.65
HDAC3-212ENST00000492407 LRRCC1Q9C099 1032 aa10.98□□□□□ -0.65
HDAC3-212ENST00000492407 UBE2OQ9C0C9 1292 aaKnown RBP10.98□□□□□ -0.65
HDAC3-212ENST00000492407 BOLA2Q9H3K6 86 aa10.98□□□□□ -0.65
HDAC3-212ENST00000492407 DIS3Q9Y2L1 958 aaKnown RBP10.98□□□□□ -0.65
HDAC3-212ENST00000492407 DDX60LQ5H9U9 1706 aaKnown RBP10.98□□□□□ -0.65
HDAC3-212ENST00000492407 USP17L12C9JPN9 530 aa10.97□□□□□ -0.65
HDAC3-212ENST00000492407 USP17L21D6R901 530 aa10.97□□□□□ -0.65
HDAC3-212ENST00000492407 APBB1O00213 710 aa10.97□□□□□ -0.65
HDAC3-212ENST00000492407 SEPT4O43236 478 aa10.97□□□□□ -0.65
HDAC3-212ENST00000492407 FLOT1O75955 427 aa10.97□□□□□ -0.65
HDAC3-212ENST00000492407 FCER1AP12319 257 aa10.97□□□□□ -0.65
HDAC3-212ENST00000492407 AKR1B1P15121 316 aa10.97□□□□□ -0.65
HDAC3-212ENST00000492407 CNGA1P29973 690 aa10.97□□□□□ -0.65
HDAC3-212ENST00000492407 LRRC26Q2I0M4 334 aa10.97□□□□□ -0.65
HDAC3-212ENST00000492407 SBK1Q52WX2 424 aa10.97□□□□□ -0.65
HDAC3-212ENST00000492407 C1orf53Q5VUE5 145 aa10.97□□□□□ -0.65
HDAC3-212ENST00000492407 SENP6Q9GZR1 1112 aaPredicted RBP10.97□□□□□ -0.65
HDAC3-212ENST00000492407 ARPP21Q9UBL0 812 aaPredicted RBP10.97□□□□□ -0.65
HDAC3-212ENST00000492407 RCAN3Q9UKA8 241 aa10.97□□□□□ -0.65
HDAC3-212ENST00000492407 SYNPO2Q9UMS6 1093 aa10.97□□□□□ -0.65
HDAC3-212ENST00000492407 MYO5AQ9Y4I1 1855 aaKnown RBP10.96□□□□□ -0.65
HDAC3-212ENST00000492407 PRKAB2O43741 272 aa10.96□□□□□ -0.65
HDAC3-212ENST00000492407 CYP2D6P10635 497 aa10.96□□□□□ -0.65
HDAC3-212ENST00000492407 SYN1P17600 705 aa10.96□□□□□ -0.65
HDAC3-212ENST00000492407 CYP2C19P33261 490 aa10.96□□□□□ -0.65
HDAC3-212ENST00000492407 FAM109BQ6ICB4 259 aaPredicted RBP10.96□□□□□ -0.65
HDAC3-212ENST00000492407 CTR9Q6PD62 1173 aa10.96□□□□□ -0.65
HDAC3-212ENST00000492407 RIOX2Q8IUF8 465 aa10.96□□□□□ -0.65
HDAC3-212ENST00000492407 SLC44A5Q8NCS7 719 aa10.96□□□□□ -0.65
HDAC3-212ENST00000492407 TRPV1Q8NER1 839 aa10.96□□□□□ -0.65
HDAC3-212ENST00000492407 DYNLL2Q96FJ2 89 aa10.96□□□□□ -0.65
HDAC3-212ENST00000492407 LRCH3Q96II8 777 aa10.96□□□□□ -0.65
HDAC3-212ENST00000492407 ZNF287Q9HBT7 754 aa10.96□□□□□ -0.65
HDAC3-212ENST00000492407 GOPCQ9HD26 462 aa10.96□□□□□ -0.65
HDAC3-212ENST00000492407 ECHDC1Q9NTX5 307 aa10.96□□□□□ -0.65
HDAC3-212ENST00000492407 PRKAG2Q9UGJ0 569 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms