RNA–Protein interactions for RNA: ENST00000492235.1

TREX1-204, Transcript of three prime repair exonuclease 1, humanhuman

TSL 3

Gene TREX1, Length 696 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-204ENST00000492235 PRDM5Q9NQX1 630 aaPredicted RBP15.18■□□□□ 0.02
TREX1-204ENST00000492235 LAMA2P24043 3122 aaKnown RBP15.18■□□□□ 0.02
TREX1-204ENST00000492235 A0A0G2JMZ2 1700 aa15.17■□□□□ 0.02
TREX1-204ENST00000492235 MAGEB6P1A0A0J9YX57 407 aa15.17■□□□□ 0.02
TREX1-204ENST00000492235 A0A1W2PRG0 241 aa15.17■□□□□ 0.02
TREX1-204ENST00000492235 KBTBD13C9JR72 458 aa15.17■□□□□ 0.02
TREX1-204ENST00000492235 IGHA2P01877 340 aa15.17■□□□□ 0.02
TREX1-204ENST00000492235 GABPAQ06546 454 aa15.17■□□□□ 0.02
TREX1-204ENST00000492235 OLFML2BQ68BL8 750 aa15.17■□□□□ 0.02
TREX1-204ENST00000492235 SLC39A5Q6ZMH5 540 aa15.17■□□□□ 0.02
TREX1-204ENST00000492235 AACSQ86V21 672 aa15.17■□□□□ 0.02
TREX1-204ENST00000492235 ITPRIPQ8IWB1 547 aa15.17■□□□□ 0.02
TREX1-204ENST00000492235 FTSJ3Q8IY81 847 aaKnown RBP15.17■□□□□ 0.02
TREX1-204ENST00000492235 SPATC1LQ9H0A9 340 aa15.17■□□□□ 0.02
TREX1-204ENST00000492235 HOXC10Q9NYD6 342 aa15.17■□□□□ 0.02
TREX1-204ENST00000492235 STRNO43815 780 aa15.16■□□□□ 0.02
TREX1-204ENST00000492235 COBLO75128 1261 aa15.16■□□□□ 0.02
TREX1-204ENST00000492235 ERCC3P19447 782 aa15.16■□□□□ 0.02
TREX1-204ENST00000492235 PLS1Q14651 629 aa15.16■□□□□ 0.02
TREX1-204ENST00000492235 SHHQ15465 462 aa15.16■□□□□ 0.02
TREX1-204ENST00000492235 PRAMEF19Q5SWL8 479 aa15.16■□□□□ 0.02
TREX1-204ENST00000492235 MCM9Q9NXL9 1143 aa15.16■□□□□ 0.02
TREX1-204ENST00000492235 EXOC6BQ9Y2D4 811 aa15.16■□□□□ 0.02
TREX1-204ENST00000492235 SEPT4O43236 478 aa15.15■□□□□ 0.02
TREX1-204ENST00000492235 TRIM60Q495X7 471 aa15.15■□□□□ 0.02
TREX1-204ENST00000492235 KIAA1755Q5JYT7 1200 aa15.15■□□□□ 0.02
TREX1-204ENST00000492235 C9orf50Q5SZB4 431 aa15.15■□□□□ 0.02
TREX1-204ENST00000492235 TMED8Q6PL24 325 aaPredicted RBP15.15■□□□□ 0.02
TREX1-204ENST00000492235 NCAPG2Q86XI2 1143 aa15.15■□□□□ 0.02
TREX1-204ENST00000492235 SHCBP1Q8NEM2 672 aa15.15■□□□□ 0.02
TREX1-204ENST00000492235 SDR42E1Q8WUS8 393 aa15.15■□□□□ 0.02
TREX1-204ENST00000492235 BADQ92934 168 aa15.15■□□□□ 0.02
TREX1-204ENST00000492235 FERMT2Q96AC1 680 aa15.15■□□□□ 0.02
TREX1-204ENST00000492235 CRNKL1Q9BZJ0 848 aaKnown RBP15.15■□□□□ 0.02
TREX1-204ENST00000492235 MYH8P13535 1937 aa15.15■□□□□ 0.02
TREX1-204ENST00000492235 CCER2I3L3R5 266 aa15.14■□□□□ 0.01
TREX1-204ENST00000492235 CYP2D6P10635 497 aa15.14■□□□□ 0.01
TREX1-204ENST00000492235 RLBP1P12271 317 aa15.14■□□□□ 0.01
TREX1-204ENST00000492235 PDE6AP16499 860 aa15.14■□□□□ 0.01
TREX1-204ENST00000492235 ADCYAP1R1P41586 468 aa15.14■□□□□ 0.01
TREX1-204ENST00000492235 SLC9C2Q5TAH2 1124 aa15.14■□□□□ 0.01
TREX1-204ENST00000492235 CEP85Q6P2H3 762 aa15.14■□□□□ 0.01
TREX1-204ENST00000492235 SAMD1Q6SPF0 538 aaPredicted RBP15.14■□□□□ 0.01
TREX1-204ENST00000492235 SLC44A5Q8NCS7 719 aa15.14■□□□□ 0.01
TREX1-204ENST00000492235 CDX2Q99626 313 aaPredicted RBP15.14■□□□□ 0.01
TREX1-204ENST00000492235 SLC5A4Q9NY91 659 aa15.14■□□□□ 0.01
TREX1-204ENST00000492235 FLOT1O75955 427 aa15.13■□□□□ 0.01
TREX1-204ENST00000492235 DSG3P32926 999 aa15.13■□□□□ 0.01
TREX1-204ENST00000492235 SNX17Q15036 470 aa15.13■□□□□ 0.01
TREX1-204ENST00000492235 TTF1Q15361 905 aaPredicted RBP15.13■□□□□ 0.01
TREX1-204ENST00000492235 TMEM179Q6ZVK1 233 aa15.13■□□□□ 0.01
TREX1-204ENST00000492235 SH3RF1Q7Z6J0 888 aa15.13■□□□□ 0.01
TREX1-204ENST00000492235 ERC1Q8IUD2 1116 aa15.13■□□□□ 0.01
TREX1-204ENST00000492235 CLEC10AQ8IUN9 316 aa15.13■□□□□ 0.01
TREX1-204ENST00000492235 SPICE1Q8N0Z3 855 aa15.13■□□□□ 0.01
TREX1-204ENST00000492235 MB21D1Q8N884 522 aa15.13■□□□□ 0.01
TREX1-204ENST00000492235 ATG4CQ96DT6 458 aa15.13■□□□□ 0.01
TREX1-204ENST00000492235 SEMA6BQ9H3T3 888 aa15.13■□□□□ 0.01
TREX1-204ENST00000492235 MROH8Q9H579 483 aa15.13■□□□□ 0.01
TREX1-204ENST00000492235 IL1RAPL2Q9NP60 686 aa15.13■□□□□ 0.01
TREX1-204ENST00000492235 DCP1AQ9NPI6 582 aaPredicted RBP15.13■□□□□ 0.01
TREX1-204ENST00000492235 PDLIM7Q9NR12 457 aa15.13■□□□□ 0.01
TREX1-204ENST00000492235 ZNFX1Q9P2E3 1918 aaKnown RBP15.13■□□□□ 0.01
TREX1-204ENST00000492235 ZNF532Q9HCE3 1301 aa15.13■□□□□ 0.01
TREX1-204ENST00000492235 TRIM43BA6NCK2 446 aa15.12■□□□□ 0.01
TREX1-204ENST00000492235 LRRC41Q15345 812 aa15.12■□□□□ 0.01
TREX1-204ENST00000492235 FAM47AQ5JRC9 791 aa15.12■□□□□ 0.01
TREX1-204ENST00000492235 LCORLQ8N3X6 602 aa15.12■□□□□ 0.01
TREX1-204ENST00000492235 TRIM43Q96BQ3 446 aaPredicted RBP15.12■□□□□ 0.01
TREX1-204ENST00000492235 DYNLL2Q96FJ2 89 aa15.12■□□□□ 0.01
TREX1-204ENST00000492235 MAML3Q96JK9 1138 aa15.12■□□□□ 0.01
TREX1-204ENST00000492235 EYSQ5T1H1 3165 aa15.12■□□□□ 0.01
TREX1-204ENST00000492235 COL11A1P12107 1806 aaPredicted RBP15.12■□□□□ 0.01
TREX1-204ENST00000492235 PARP14Q460N5 1801 aa15.12■□□□□ 0.01
TREX1-204ENST00000492235 GOLIM4O00461 696 aa15.11■□□□□ 0.01
TREX1-204ENST00000492235 FCER1AP12319 257 aa15.11■□□□□ 0.01
TREX1-204ENST00000492235 AKR1B1P15121 316 aa15.11■□□□□ 0.01
TREX1-204ENST00000492235 ICA1Q05084 483 aa15.11■□□□□ 0.01
TREX1-204ENST00000492235 SIAH1Q8IUQ4 282 aa15.11■□□□□ 0.01
TREX1-204ENST00000492235 ABRAQ8N0Z2 381 aa15.11■□□□□ 0.01
TREX1-204ENST00000492235 MAFAQ8NHW3 353 aaPredicted RBP15.11■□□□□ 0.01
TREX1-204ENST00000492235 MYLIPQ8WY64 445 aa15.11■□□□□ 0.01
TREX1-204ENST00000492235 DNAJC2Q99543 621 aaKnown RBP15.11■□□□□ 0.01
TREX1-204ENST00000492235 BCL11AQ9H165 835 aa15.11■□□□□ 0.01
TREX1-204ENST00000492235 ARMT1Q9H993 441 aa15.11■□□□□ 0.01
TREX1-204ENST00000492235 ARHGEF10LQ9HCE6 1279 aa15.11■□□□□ 0.01
TREX1-204ENST00000492235 SWAP70Q9UH65 585 aa15.11■□□□□ 0.01
TREX1-204ENST00000492235 SMCHD1A6NHR9 2005 aa15.1■□□□□ 0.01
TREX1-204ENST00000492235 BAZ2AQ9UIF9 1905 aaKnown RBP15.1■□□□□ 0.01
TREX1-204ENST00000492235 TCRBV5S4A2TA0A5A2 114 aa15.1■□□□□ 0.01
TREX1-204ENST00000492235 APBB1O00213 710 aa15.1■□□□□ 0.01
TREX1-204ENST00000492235 SMAD3P84022 425 aaKnown RBP15.1■□□□□ 0.01
TREX1-204ENST00000492235 TLE2Q04725 743 aa15.1■□□□□ 0.01
TREX1-204ENST00000492235 TMEM132BQ14DG7 1078 aa15.1■□□□□ 0.01
TREX1-204ENST00000492235 RHPN1Q8TCX5 695 aa15.1■□□□□ 0.01
TREX1-204ENST00000492235 TTYH1Q9H313 450 aaPredicted RBP15.1■□□□□ 0.01
TREX1-204ENST00000492235 VCPKMTQ9H867 229 aa15.1■□□□□ 0.01
TREX1-204ENST00000492235 XPNPEP3Q9NQH7 507 aa15.1■□□□□ 0.01
TREX1-204ENST00000492235 TMX2Q9Y320 296 aa15.1■□□□□ 0.01
TREX1-204ENST00000492235 PLXNA1Q9UIW2 1896 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms