RNA–Protein interactions for RNA: ENST00000491833.5

SSR4-212, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 3

Gene SSR4, Length 921 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-212ENST00000491833 MAFAQ8NHW3 353 aaPredicted RBP17.58■□□□□ 0.4
SSR4-212ENST00000491833 CDX2Q99626 313 aaPredicted RBP17.58■□□□□ 0.4
SSR4-212ENST00000491833 TANGO6Q9C0B7 1094 aa17.58■□□□□ 0.4
SSR4-212ENST00000491833 SPATC1LQ9H0A9 340 aa17.58■□□□□ 0.4
SSR4-212ENST00000491833 PDLIM7Q9NR12 457 aa17.58■□□□□ 0.4
SSR4-212ENST00000491833 SLC5A4Q9NY91 659 aa17.58■□□□□ 0.4
SSR4-212ENST00000491833 POLR3DP05423 398 aaPredicted RBP17.57■□□□□ 0.4
SSR4-212ENST00000491833 ERCC3P19447 782 aa17.57■□□□□ 0.4
SSR4-212ENST00000491833 GUCY1A2P33402 732 aa17.57■□□□□ 0.4
SSR4-212ENST00000491833 PLCD1P51178 756 aa17.57■□□□□ 0.4
SSR4-212ENST00000491833 COG2Q14746 738 aa17.57■□□□□ 0.4
SSR4-212ENST00000491833 SEPT2Q15019 361 aa17.57■□□□□ 0.4
SSR4-212ENST00000491833 SNX17Q15036 470 aa17.57■□□□□ 0.4
SSR4-212ENST00000491833 ANO1Q5XXA6 986 aa17.57■□□□□ 0.4
SSR4-212ENST00000491833 BADQ92934 168 aa17.57■□□□□ 0.4
SSR4-212ENST00000491833 HOXC10Q9NYD6 342 aa17.57■□□□□ 0.4
SSR4-212ENST00000491833 MPHOSPH10O00566 681 aaKnown RBP17.56■□□□□ 0.4
SSR4-212ENST00000491833 SMAD3P84022 425 aaKnown RBP17.56■□□□□ 0.4
SSR4-212ENST00000491833 ZKSCAN2Q63HK3 967 aa17.56■□□□□ 0.4
SSR4-212ENST00000491833 MB21D1Q8N884 522 aa17.56■□□□□ 0.4
SSR4-212ENST00000491833 EAF2Q96CJ1 260 aaPredicted RBP17.56■□□□□ 0.4
SSR4-212ENST00000491833 RIOK1Q9BRS2 568 aaKnown RBP17.56■□□□□ 0.4
SSR4-212ENST00000491833 ANTXR1Q9H6X2 564 aa17.56■□□□□ 0.4
SSR4-212ENST00000491833 C1orf115Q9H7X2 142 aa17.56■□□□□ 0.4
SSR4-212ENST00000491833 NOP58Q9Y2X3 529 aaKnown RBP17.56■□□□□ 0.4
SSR4-212ENST00000491833 DNAH12Q6ZR08 3092 aa17.56■□□□□ 0.4
SSR4-212ENST00000491833 GABPAQ06546 454 aa17.55■□□□□ 0.4
SSR4-212ENST00000491833 SEMA6BQ9H3T3 888 aa17.55■□□□□ 0.4
SSR4-212ENST00000491833 MYH8P13535 1937 aa17.55■□□□□ 0.4
SSR4-212ENST00000491833 VCANP13611 3396 aa17.54■□□□□ 0.4
SSR4-212ENST00000491833 MAGEB6P1A0A0J9YX57 407 aa17.54■□□□□ 0.4
SSR4-212ENST00000491833 A0A1W2PRG0 241 aa17.54■□□□□ 0.4
SSR4-212ENST00000491833 COBLO75128 1261 aa17.54■□□□□ 0.4
SSR4-212ENST00000491833 ADCYAP1R1P41586 468 aa17.54■□□□□ 0.4
SSR4-212ENST00000491833 PLS1Q14651 629 aa17.54■□□□□ 0.4
SSR4-212ENST00000491833 LRRC41Q15345 812 aa17.54■□□□□ 0.4
SSR4-212ENST00000491833 FAM47AQ5JRC9 791 aa17.54■□□□□ 0.4
SSR4-212ENST00000491833 C1orf53Q5VUE5 145 aa17.54■□□□□ 0.4
SSR4-212ENST00000491833 NCAPG2Q86XI2 1143 aa17.54■□□□□ 0.4
SSR4-212ENST00000491833 ABRAQ8N0Z2 381 aa17.54■□□□□ 0.4
SSR4-212ENST00000491833 MYLIPQ8WY64 445 aa17.54■□□□□ 0.4
SSR4-212ENST00000491833 CRNKL1Q9BZJ0 848 aaKnown RBP17.54■□□□□ 0.4
SSR4-212ENST00000491833 MROH8Q9H579 483 aa17.54■□□□□ 0.4
SSR4-212ENST00000491833 MCM9Q9NXL9 1143 aa17.54■□□□□ 0.4
SSR4-212ENST00000491833 CDH23Q9H251 3354 aa17.53■□□□□ 0.4
SSR4-212ENST00000491833 FOSL2P15408 326 aa17.53■□□□□ 0.4
SSR4-212ENST00000491833 DSG3P32926 999 aa17.53■□□□□ 0.4
SSR4-212ENST00000491833 TMEM179Q6ZVK1 233 aa17.53■□□□□ 0.4
SSR4-212ENST00000491833 FERMT2Q96AC1 680 aa17.53■□□□□ 0.4
SSR4-212ENST00000491833 MAML3Q96JK9 1138 aa17.53■□□□□ 0.4
SSR4-212ENST00000491833 TTYH1Q9H313 450 aaPredicted RBP17.53■□□□□ 0.4
SSR4-212ENST00000491833 PARP14Q460N5 1801 aa17.53■□□□□ 0.4
SSR4-212ENST00000491833 EYSQ5T1H1 3165 aa17.52■□□□□ 0.4
SSR4-212ENST00000491833 LAMA2P24043 3122 aaKnown RBP17.52■□□□□ 0.4
SSR4-212ENST00000491833 TMEM265A0A087WTH1 108 aa17.52■□□□□ 0.4
SSR4-212ENST00000491833 TRIM43BA6NCK2 446 aa17.52■□□□□ 0.4
SSR4-212ENST00000491833 FLOT1O75955 427 aa17.52■□□□□ 0.4
SSR4-212ENST00000491833 TTF1Q15361 905 aaPredicted RBP17.52■□□□□ 0.4
SSR4-212ENST00000491833 SH3RF1Q7Z6J0 888 aa17.52■□□□□ 0.4
SSR4-212ENST00000491833 FTSJ3Q8IY81 847 aaKnown RBP17.52■□□□□ 0.4
SSR4-212ENST00000491833 TRIM43Q96BQ3 446 aaPredicted RBP17.52■□□□□ 0.4
SSR4-212ENST00000491833 SH2D4AQ9H788 454 aa17.52■□□□□ 0.4
SSR4-212ENST00000491833 ROBO3Q96MS0 1386 aa17.52■□□□□ 0.39
SSR4-212ENST00000491833 SPTBN5Q9NRC6 3674 aaKnown RBP17.51■□□□□ 0.39
SSR4-212ENST00000491833 CLTBP09497 229 aa17.51■□□□□ 0.39
SSR4-212ENST00000491833 RARBP10826 455 aa17.51■□□□□ 0.39
SSR4-212ENST00000491833 FCER1AP12319 257 aa17.51■□□□□ 0.39
SSR4-212ENST00000491833 EVX2Q03828 476 aa17.51■□□□□ 0.39
SSR4-212ENST00000491833 PRAMEF19Q5SWL8 479 aa17.51■□□□□ 0.39
SSR4-212ENST00000491833 AACSQ86V21 672 aa17.51■□□□□ 0.39
SSR4-212ENST00000491833 ERC1Q8IUD2 1116 aa17.51■□□□□ 0.39
SSR4-212ENST00000491833 ITPRIPQ8IWB1 547 aa17.51■□□□□ 0.39
SSR4-212ENST00000491833 ATG4CQ96DT6 458 aa17.51■□□□□ 0.39
SSR4-212ENST00000491833 RNPC3Q96LT9 517 aaKnown RBP17.51■□□□□ 0.39
SSR4-212ENST00000491833 ARHGEF10LQ9HCE6 1279 aa17.51■□□□□ 0.39
SSR4-212ENST00000491833 XPNPEP3Q9NQH7 507 aa17.51■□□□□ 0.39
SSR4-212ENST00000491833 SWAP70Q9UH65 585 aa17.51■□□□□ 0.39
SSR4-212ENST00000491833 NRBP1Q9UHY1 535 aa17.51■□□□□ 0.39
SSR4-212ENST00000491833 PHF24Q9UPV7 400 aa17.51■□□□□ 0.39
SSR4-212ENST00000491833 SLC25A27O95847 323 aa17.5■□□□□ 0.39
SSR4-212ENST00000491833 PDE6AP16499 860 aa17.5■□□□□ 0.39
SSR4-212ENST00000491833 TLE2Q04725 743 aa17.5■□□□□ 0.39
SSR4-212ENST00000491833 ICA1Q05084 483 aa17.5■□□□□ 0.39
SSR4-212ENST00000491833 RNF180Q86T96 592 aa17.5■□□□□ 0.39
SSR4-212ENST00000491833 TACC3Q9Y6A5 838 aa17.5■□□□□ 0.39
SSR4-212ENST00000491833 COL11A1P12107 1806 aaPredicted RBP17.49■□□□□ 0.39
SSR4-212ENST00000491833 WDR46O15213 610 aaKnown RBP17.49■□□□□ 0.39
SSR4-212ENST00000491833 KIAA1755Q5JYT7 1200 aa17.49■□□□□ 0.39
SSR4-212ENST00000491833 SLC9C2Q5TAH2 1124 aa17.49■□□□□ 0.39
SSR4-212ENST00000491833 SAMD1Q6SPF0 538 aaPredicted RBP17.49■□□□□ 0.39
SSR4-212ENST00000491833 SPICE1Q8N0Z3 855 aa17.49■□□□□ 0.39
SSR4-212ENST00000491833 SLC44A5Q8NCS7 719 aa17.49■□□□□ 0.39
SSR4-212ENST00000491833 SDR42E1Q8WUS8 393 aa17.49■□□□□ 0.39
SSR4-212ENST00000491833 SYMPKQ92797 1274 aaKnown RBP17.49■□□□□ 0.39
SSR4-212ENST00000491833 VCPKMTQ9H867 229 aa17.49■□□□□ 0.39
SSR4-212ENST00000491833 DCP1AQ9NPI6 582 aaPredicted RBP17.49■□□□□ 0.39
SSR4-212ENST00000491833 TMX2Q9Y320 296 aa17.49■□□□□ 0.39
SSR4-212ENST00000491833 PLXNA1Q9UIW2 1896 aa17.49■□□□□ 0.39
SSR4-212ENST00000491833 ZNF532Q9HCE3 1301 aa17.48■□□□□ 0.39
SSR4-212ENST00000491833 RAG1P15918 1043 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms