RNA–Protein interactions for RNA: ENST00000491433.1

CLCNKA-206, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 3

Gene CLCNKA, Length 824 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-206ENST00000491433 OLFML2BQ68BL8 750 aa13.65□□□□□ -0.22
CLCNKA-206ENST00000491433 CATSPERGQ6ZRH7 1159 aa13.65□□□□□ -0.22
CLCNKA-206ENST00000491433 DPP9Q86TI2 863 aa13.65□□□□□ -0.22
CLCNKA-206ENST00000491433 KHSRPQ92945 711 aaKnown RBP eCLIP13.65□□□□□ -0.22
CLCNKA-206ENST00000491433 DNAJC18Q9H819 358 aa13.65□□□□□ -0.22
CLCNKA-206ENST00000491433 FLRT1Q9NZU1 646 aa13.65□□□□□ -0.22
CLCNKA-206ENST00000491433 ZNF236Q9UL36 1845 aa13.64□□□□□ -0.23
CLCNKA-206ENST00000491433 SEPT4O43236 478 aa13.64□□□□□ -0.23
CLCNKA-206ENST00000491433 CNMDO75829 334 aa13.64□□□□□ -0.23
CLCNKA-206ENST00000491433 CYBAP13498 195 aa13.64□□□□□ -0.23
CLCNKA-206ENST00000491433 MCAMP43121 646 aa13.64□□□□□ -0.23
CLCNKA-206ENST00000491433 G3BP1Q13283 466 aaKnown RBP eCLIP13.64□□□□□ -0.23
CLCNKA-206ENST00000491433 ADGRE1Q14246 886 aa13.64□□□□□ -0.23
CLCNKA-206ENST00000491433 SNX17Q15036 470 aa13.64□□□□□ -0.23
CLCNKA-206ENST00000491433 GJC2Q5T442 439 aaPredicted RBP13.64□□□□□ -0.23
CLCNKA-206ENST00000491433 KIAA1683Q9H0B3 1180 aa13.64□□□□□ -0.23
CLCNKA-206ENST00000491433 CABP5Q9NP86 173 aa13.64□□□□□ -0.23
CLCNKA-206ENST00000491433 PALD1Q9ULE6 856 aa13.64□□□□□ -0.23
CLCNKA-206ENST00000491433 TACC3Q9Y6A5 838 aa13.64□□□□□ -0.23
CLCNKA-206ENST00000491433 MYH1P12882 1939 aa13.64□□□□□ -0.23
CLCNKA-206ENST00000491433 ERC2O15083 957 aa13.63□□□□□ -0.23
CLCNKA-206ENST00000491433 GH2P01242 217 aa13.63□□□□□ -0.23
CLCNKA-206ENST00000491433 CYP2C19P33261 490 aa13.63□□□□□ -0.23
CLCNKA-206ENST00000491433 JAG1P78504 1218 aa13.63□□□□□ -0.23
CLCNKA-206ENST00000491433 SKIV2LQ15477 1246 aaKnown RBP13.63□□□□□ -0.23
CLCNKA-206ENST00000491433 CCDC158Q5M9N0 1113 aa13.63□□□□□ -0.23
CLCNKA-206ENST00000491433 PI16Q6UXB8 463 aa13.63□□□□□ -0.23
CLCNKA-206ENST00000491433 NPLOC4Q8TAT6 608 aa13.63□□□□□ -0.23
CLCNKA-206ENST00000491433 MEIS3Q99687 375 aa13.63□□□□□ -0.23
CLCNKA-206ENST00000491433 PDLIM7Q9NR12 457 aa13.63□□□□□ -0.23
CLCNKA-206ENST00000491433 HOXC10Q9NYD6 342 aa13.63□□□□□ -0.23
CLCNKA-206ENST00000491433 NDUFB9Q9Y6M9 179 aa13.63□□□□□ -0.23
CLCNKA-206ENST00000491433 VCAM1P19320 739 aa13.62□□□□□ -0.23
CLCNKA-206ENST00000491433 RAB3GAP1Q15042 981 aa13.62□□□□□ -0.23
CLCNKA-206ENST00000491433 ZYXQ15942 572 aaKnown RBP13.62□□□□□ -0.23
CLCNKA-206ENST00000491433 TRIM60Q495X7 471 aa13.62□□□□□ -0.23
CLCNKA-206ENST00000491433 TTC39AQ5SRH9 613 aa13.62□□□□□ -0.23
CLCNKA-206ENST00000491433 TATDN1Q6P1N9 297 aa13.62□□□□□ -0.23
CLCNKA-206ENST00000491433 TMED8Q6PL24 325 aaPredicted RBP13.62□□□□□ -0.23
CLCNKA-206ENST00000491433 ERMP1Q7Z2K6 904 aa13.62□□□□□ -0.23
CLCNKA-206ENST00000491433 TTC6Q86TZ1 520 aa13.62□□□□□ -0.23
CLCNKA-206ENST00000491433 SHCBP1Q8NEM2 672 aa13.62□□□□□ -0.23
CLCNKA-206ENST00000491433 EHD4Q9H223 541 aa13.62□□□□□ -0.23
CLCNKA-206ENST00000491433 SERPINB13Q9UIV8 391 aa13.62□□□□□ -0.23
CLCNKA-206ENST00000491433 SPDYE16A6NNV3 312 aaPredicted RBP13.61□□□□□ -0.23
CLCNKA-206ENST00000491433 IGHA2P01877 340 aa13.61□□□□□ -0.23
CLCNKA-206ENST00000491433 SLFN5Q08AF3 891 aa13.61□□□□□ -0.23
CLCNKA-206ENST00000491433 ABCB5Q2M3G0 1257 aa13.61□□□□□ -0.23
CLCNKA-206ENST00000491433 CERKLQ49MI3 558 aaPredicted RBP13.61□□□□□ -0.23
CLCNKA-206ENST00000491433 MB21D1Q8N884 522 aa13.61□□□□□ -0.23
CLCNKA-206ENST00000491433 TRPV1Q8NER1 839 aa13.61□□□□□ -0.23
CLCNKA-206ENST00000491433 GPR108Q9NPR9 543 aa13.61□□□□□ -0.23
CLCNKA-206ENST00000491433 BTBD7Q9P203 1132 aa13.61□□□□□ -0.23
CLCNKA-206ENST00000491433 NRBP1Q9UHY1 535 aa13.61□□□□□ -0.23
CLCNKA-206ENST00000491433 NOB1Q9ULX3 412 aaKnown RBP13.61□□□□□ -0.23
CLCNKA-206ENST00000491433 WDFY4Q6ZS81 3184 aa13.61□□□□□ -0.23
CLCNKA-206ENST00000491433 SPTBN4Q9H254 2564 aa13.61□□□□□ -0.23
CLCNKA-206ENST00000491433 MYCNP04198 464 aaPredicted RBP13.6□□□□□ -0.23
CLCNKA-206ENST00000491433 CLTBP09497 229 aa13.6□□□□□ -0.23
CLCNKA-206ENST00000491433 ITGB8P26012 769 aa13.6□□□□□ -0.23
CLCNKA-206ENST00000491433 ADORA2AP29274 412 aa13.6□□□□□ -0.23
CLCNKA-206ENST00000491433 USP5P45974 858 aa13.6□□□□□ -0.23
CLCNKA-206ENST00000491433 COG2Q14746 738 aa13.6□□□□□ -0.23
CLCNKA-206ENST00000491433 ABRAQ8N0Z2 381 aa13.6□□□□□ -0.23
CLCNKA-206ENST00000491433 MICALL1Q8N3F8 863 aa13.6□□□□□ -0.23
CLCNKA-206ENST00000491433 HERVK_113Q902F9 699 aa13.6□□□□□ -0.23
CLCNKA-206ENST00000491433 MROH8Q9H579 483 aa13.6□□□□□ -0.23
CLCNKA-206ENST00000491433 RPAP3Q9H6T3 665 aaPredicted RBP13.6□□□□□ -0.23
CLCNKA-206ENST00000491433 SAP30BPQ9UHR5 308 aaKnown RBP13.6□□□□□ -0.23
CLCNKA-206ENST00000491433 BAHCC1Q9P281 2608 aa13.59□□□□□ -0.23
CLCNKA-206ENST00000491433 TRIM43BA6NCK2 446 aa13.59□□□□□ -0.23
CLCNKA-206ENST00000491433 TLL1O43897 1013 aa13.59□□□□□ -0.23
CLCNKA-206ENST00000491433 RAG1P15918 1043 aa13.59□□□□□ -0.23
CLCNKA-206ENST00000491433 ADCYAP1R1P41586 468 aa13.59□□□□□ -0.23
CLCNKA-206ENST00000491433 LRRC41Q15345 812 aa13.59□□□□□ -0.23
CLCNKA-206ENST00000491433 SHROOM1Q2M3G4 852 aaPredicted RBP13.59□□□□□ -0.23
CLCNKA-206ENST00000491433 CCDC174Q6PII3 467 aa13.59□□□□□ -0.23
CLCNKA-206ENST00000491433 CCDC129Q6ZRS4 1044 aa13.59□□□□□ -0.23
CLCNKA-206ENST00000491433 RNF180Q86T96 592 aa13.59□□□□□ -0.23
CLCNKA-206ENST00000491433 ARHGAP45Q92619 1136 aa13.59□□□□□ -0.23
CLCNKA-206ENST00000491433 TRIM43Q96BQ3 446 aaPredicted RBP13.59□□□□□ -0.23
CLCNKA-206ENST00000491433 ZNF512BQ96KM6 892 aaPredicted RBP13.59□□□□□ -0.23
CLCNKA-206ENST00000491433 CHD8Q9HCK8 2581 aa13.59□□□□□ -0.23
CLCNKA-206ENST00000491433 KIAA0355O15063 1070 aa13.58□□□□□ -0.24
CLCNKA-206ENST00000491433 KRT37O76014 449 aa13.58□□□□□ -0.24
CLCNKA-206ENST00000491433 GNAI2P04899 355 aa13.58□□□□□ -0.24
CLCNKA-206ENST00000491433 RARBP10826 455 aa13.58□□□□□ -0.24
CLCNKA-206ENST00000491433 TLE2Q04725 743 aa13.58□□□□□ -0.24
CLCNKA-206ENST00000491433 FPGSQ05932 587 aa13.58□□□□□ -0.24
CLCNKA-206ENST00000491433 PHOX2BQ99453 314 aa13.58□□□□□ -0.24
CLCNKA-206ENST00000491433 MOV10L1Q9BXT6 1211 aaKnown RBP13.58□□□□□ -0.24
CLCNKA-206ENST00000491433 SPATC1LQ9H0A9 340 aa13.58□□□□□ -0.24
CLCNKA-206ENST00000491433 SNRKQ9NRH2 765 aa13.58□□□□□ -0.24
CLCNKA-206ENST00000491433 COG5Q9UP83 839 aa13.58□□□□□ -0.24
CLCNKA-206ENST00000491433 PHF24Q9UPV7 400 aa13.58□□□□□ -0.24
CLCNKA-206ENST00000491433 MYO9BQ13459 2157 aa13.58□□□□□ -0.24
CLCNKA-206ENST00000491433 USP34Q70CQ2 3546 aa13.57□□□□□ -0.24
CLCNKA-206ENST00000491433 CYP2E1P05181 493 aaPredicted RBP13.57□□□□□ -0.24
CLCNKA-206ENST00000491433 ALADP13716 330 aa13.57□□□□□ -0.24
CLCNKA-206ENST00000491433 ERCC3P19447 782 aa13.57□□□□□ -0.24
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