RNA–Protein interactions for RNA: ENST00000490910.5

CRNKL1-204, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best)

Gene CRNKL1, Length 4,183 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-204ENST00000490910 QRICH2Q9H0J4 1663 aa12.56□□□□□ -0.4
CRNKL1-204ENST00000490910 GCFC2P16383 781 aaKnown RBP12.55□□□□□ -0.4
CRNKL1-204ENST00000490910 UBE4AQ14139 1066 aa12.55□□□□□ -0.4
CRNKL1-204ENST00000490910 RAD9BQ6WBX8 426 aa12.55□□□□□ -0.4
CRNKL1-204ENST00000490910 KCNH5Q8NCM2 988 aa12.55□□□□□ -0.4
CRNKL1-204ENST00000490910 ANKZF1Q9H8Y5 726 aa12.55□□□□□ -0.4
CRNKL1-204ENST00000490910 ABHD10Q9NUJ1 306 aa12.55□□□□□ -0.4
CRNKL1-204ENST00000490910 STIM2Q9P246 746 aa12.55□□□□□ -0.4
CRNKL1-204ENST00000490910 HDAC6Q9UBN7 1215 aa12.55□□□□□ -0.4
CRNKL1-204ENST00000490910 ADGRB2O60241 1585 aa12.55□□□□□ -0.4
CRNKL1-204ENST00000490910 HIP1RO75146 1068 aa12.55□□□□□ -0.4
CRNKL1-204ENST00000490910 ST3GAL1Q11201 340 aa12.55□□□□□ -0.4
CRNKL1-204ENST00000490910 GCKRQ14397 625 aa12.55□□□□□ -0.4
CRNKL1-204ENST00000490910 LMBR1Q8WVP7 490 aa12.55□□□□□ -0.4
CRNKL1-204ENST00000490910 RASAL2Q9UJF2 1139 aa12.55□□□□□ -0.4
CRNKL1-204ENST00000490910 TUBE1Q9UJT0 475 aa12.55□□□□□ -0.4
CRNKL1-204ENST00000490910 RAB21Q9UL25 225 aa12.55□□□□□ -0.4
CRNKL1-204ENST00000490910 TET3O43151 1660 aa12.55□□□□□ -0.4
CRNKL1-204ENST00000490910 HMGB1P1B2RPK0 211 aaPredicted RBP12.55□□□□□ -0.4
CRNKL1-204ENST00000490910 PPP1R12AO14974 1030 aaPredicted RBP12.55□□□□□ -0.4
CRNKL1-204ENST00000490910 COBLO75128 1261 aa12.55□□□□□ -0.4
CRNKL1-204ENST00000490910 RPS6KA5O75582 802 aa12.55□□□□□ -0.4
CRNKL1-204ENST00000490910 SETDB1Q15047 1291 aa12.55□□□□□ -0.4
CRNKL1-204ENST00000490910 TRIM68Q6AZZ1 485 aa12.55□□□□□ -0.4
CRNKL1-204ENST00000490910 RASGRP2Q7LDG7 609 aa12.55□□□□□ -0.4
CRNKL1-204ENST00000490910 GPIHBP1Q8IV16 184 aa12.55□□□□□ -0.4
CRNKL1-204ENST00000490910 SPDL1Q96EA4 605 aa12.55□□□□□ -0.4
CRNKL1-204ENST00000490910 VCXQ9H320 206 aa12.55□□□□□ -0.4
CRNKL1-204ENST00000490910 LGR6Q9HBX8 967 aa12.55□□□□□ -0.4
CRNKL1-204ENST00000490910 KDRP35968 1356 aa12.55□□□□□ -0.4
CRNKL1-204ENST00000490910 USP5P45974 858 aa12.55□□□□□ -0.4
CRNKL1-204ENST00000490910 MRPS25P82663 173 aaKnown RBP12.55□□□□□ -0.4
CRNKL1-204ENST00000490910 MXRA7P84157 204 aa12.55□□□□□ -0.4
CRNKL1-204ENST00000490910 CD248Q9HCU0 757 aa12.55□□□□□ -0.4
CRNKL1-204ENST00000490910 ABCF2Q9UG63 623 aa12.55□□□□□ -0.4
CRNKL1-204ENST00000490910 PPP1R12BO60237 982 aaPredicted RBP12.54□□□□□ -0.4
CRNKL1-204ENST00000490910 CEP104O60308 925 aa12.54□□□□□ -0.4
CRNKL1-204ENST00000490910 CCDC38Q502W7 563 aa12.54□□□□□ -0.4
CRNKL1-204ENST00000490910 LDHAL6AQ6ZMR3 332 aa12.54□□□□□ -0.4
CRNKL1-204ENST00000490910 INTS8Q75QN2 995 aaKnown RBP12.54□□□□□ -0.4
CRNKL1-204ENST00000490910 NLRP14Q86W24 1093 aa12.54□□□□□ -0.4
CRNKL1-204ENST00000490910 AIFM3Q96NN9 605 aa12.54□□□□□ -0.4
CRNKL1-204ENST00000490910 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.54□□□□□ -0.4
CRNKL1-204ENST00000490910 USP42Q9H9J4 1324 aaKnown RBP12.54□□□□□ -0.4
CRNKL1-204ENST00000490910 ATP7BP35670 1465 aa12.54□□□□□ -0.4
CRNKL1-204ENST00000490910 HGSO14964 777 aaPredicted RBP12.54□□□□□ -0.4
CRNKL1-204ENST00000490910 SLC39A6Q13433 755 aa12.54□□□□□ -0.4
CRNKL1-204ENST00000490910 SLMAPQ14BN4 828 aa12.54□□□□□ -0.4
CRNKL1-204ENST00000490910 WDR93Q6P2C0 686 aa12.54□□□□□ -0.4
CRNKL1-204ENST00000490910 KCNB2Q92953 911 aa12.54□□□□□ -0.4
CRNKL1-204ENST00000490910 PLIN2Q99541 437 aa12.54□□□□□ -0.4
CRNKL1-204ENST00000490910 ZBTB3Q9H5J0 574 aa12.54□□□□□ -0.4
CRNKL1-204ENST00000490910 LRRD1A4D1F6 860 aa12.54□□□□□ -0.4
CRNKL1-204ENST00000490910 SMIM24O75264 130 aa12.54□□□□□ -0.4
CRNKL1-204ENST00000490910 FGAP02671 866 aa12.54□□□□□ -0.4
CRNKL1-204ENST00000490910 SNRPA1P09661 255 aaKnown RBP12.54□□□□□ -0.4
CRNKL1-204ENST00000490910 CXCR5P32302 372 aa12.54□□□□□ -0.4
CRNKL1-204ENST00000490910 TTC38Q5R3I4 469 aa12.54□□□□□ -0.4
CRNKL1-204ENST00000490910 ESR2Q92731 530 aa12.54□□□□□ -0.4
CRNKL1-204ENST00000490910 MMS19Q96T76 1030 aa12.54□□□□□ -0.4
CRNKL1-204ENST00000490910 ZKSCAN3Q9BRR0 538 aa12.54□□□□□ -0.4
CRNKL1-204ENST00000490910 GPHNQ9NQX3 736 aaPredicted RBP12.54□□□□□ -0.4
CRNKL1-204ENST00000490910 MTRF1LQ9UGC7 380 aaKnown RBP12.54□□□□□ -0.4
CRNKL1-204ENST00000490910 ANO9A1A5B4 782 aa12.53□□□□□ -0.4
CRNKL1-204ENST00000490910 SEMA3EO15041 775 aa12.53□□□□□ -0.4
CRNKL1-204ENST00000490910 KRT31Q15323 416 aa12.53□□□□□ -0.4
CRNKL1-204ENST00000490910 ZMYM1Q5SVZ6 1142 aa12.53□□□□□ -0.4
CRNKL1-204ENST00000490910 CCNI2Q6ZMN8 369 aaPredicted RBP12.53□□□□□ -0.4
CRNKL1-204ENST00000490910 ANKRD13CQ8N6S4 541 aa12.53□□□□□ -0.4
CRNKL1-204ENST00000490910 IL17RAQ96F46 866 aa12.53□□□□□ -0.4
CRNKL1-204ENST00000490910 SH3GL3Q99963 347 aa12.53□□□□□ -0.4
CRNKL1-204ENST00000490910 METTL22Q9BUU2 404 aaPredicted RBP12.53□□□□□ -0.4
CRNKL1-204ENST00000490910 TRIM31Q9BZY9 425 aa12.53□□□□□ -0.4
CRNKL1-204ENST00000490910 CSRNP2Q9H175 543 aa12.53□□□□□ -0.4
CRNKL1-204ENST00000490910 KCNK9Q9NPC2 374 aa12.53□□□□□ -0.4
CRNKL1-204ENST00000490910 TAF6LQ9Y6J9 622 aa12.53□□□□□ -0.4
CRNKL1-204ENST00000490910 PPP1R37O75864 691 aa12.53□□□□□ -0.4
CRNKL1-204ENST00000490910 HOXC9P31274 260 aa12.53□□□□□ -0.4
CRNKL1-204ENST00000490910 PPP1R2P41236 205 aa12.53□□□□□ -0.4
CRNKL1-204ENST00000490910 ZC3H6P61129 1189 aaKnown RBP12.53□□□□□ -0.4
CRNKL1-204ENST00000490910 SLC9C1Q4G0N8 1177 aa12.53□□□□□ -0.4
CRNKL1-204ENST00000490910 SHC4Q6S5L8 630 aa12.53□□□□□ -0.4
CRNKL1-204ENST00000490910 DTHD1Q6ZMT9 781 aa12.53□□□□□ -0.4
CRNKL1-204ENST00000490910 RAB34Q9BZG1 259 aa12.53□□□□□ -0.4
CRNKL1-204ENST00000490910 FAM207AQ9NSI2 230 aaPredicted RBP12.53□□□□□ -0.4
CRNKL1-204ENST00000490910 FAM53CQ9NYF3 392 aa12.53□□□□□ -0.4
CRNKL1-204ENST00000490910 UTP11Q9Y3A2 253 aaKnown RBP12.53□□□□□ -0.4
CRNKL1-204ENST00000490910 CDHR2Q9BYE9 1310 aa12.53□□□□□ -0.4
CRNKL1-204ENST00000490910 KRT13P13646 458 aa12.53□□□□□ -0.4
CRNKL1-204ENST00000490910 MYO1EQ12965 1108 aa12.53□□□□□ -0.4
CRNKL1-204ENST00000490910 DRP2Q13474 957 aa12.53□□□□□ -0.4
CRNKL1-204ENST00000490910 NCAPHQ15003 741 aa12.53□□□□□ -0.4
CRNKL1-204ENST00000490910 ESCO1Q5FWF5 840 aa12.53□□□□□ -0.4
CRNKL1-204ENST00000490910 METTL16Q86W50 562 aaKnown RBP12.53□□□□□ -0.4
CRNKL1-204ENST00000490910 PPFIBP2Q8ND30 876 aa12.53□□□□□ -0.4
CRNKL1-204ENST00000490910 COPRSQ9NQ92 184 aa12.53□□□□□ -0.4
CRNKL1-204ENST00000490910 SH3TC1Q8TE82 1336 aa12.52□□□□□ -0.4
CRNKL1-204ENST00000490910 EYA2O00167 538 aa12.52□□□□□ -0.4
CRNKL1-204ENST00000490910 KIF3CO14782 793 aa12.52□□□□□ -0.4
CRNKL1-204ENST00000490910 CYP27A1Q02318 531 aa12.52□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms